RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 E2F1Q01094 437 aa15.14■□□□□ 0.01
USP42-201ENST00000306177 MS4A2Q01362 244 aa15.14■□□□□ 0.01
USP42-201ENST00000306177 SGCAQ16586 387 aa15.14■□□□□ 0.01
USP42-201ENST00000306177 LIPIQ6XZB0 460 aa15.14■□□□□ 0.01
USP42-201ENST00000306177 PARS2Q7L3T8 475 aaKnown RBP15.14■□□□□ 0.01
USP42-201ENST00000306177 MRPL43Q8N983 215 aaKnown RBP15.14■□□□□ 0.01
USP42-201ENST00000306177 TMIEQ8NEW7 156 aa15.14■□□□□ 0.01
USP42-201ENST00000306177 C5AR2Q9P296 337 aa15.14■□□□□ 0.01
USP42-201ENST00000306177 TMEM181Q9P2C4 612 aa15.14■□□□□ 0.01
USP42-201ENST00000306177 B4GALT7Q9UBV7 327 aa15.14■□□□□ 0.01
USP42-201ENST00000306177 STUB1Q9UNE7 303 aa15.14■□□□□ 0.01
USP42-201ENST00000306177 AKAP11Q9UKA4 1901 aa15.14■□□□□ 0.01
USP42-201ENST00000306177 PROS1P07225 676 aa15.14■□□□□ 0.01
USP42-201ENST00000306177 GPX3P22352 226 aa15.14■□□□□ 0.01
USP42-201ENST00000306177 VEZF1Q14119 521 aa15.14■□□□□ 0.01
USP42-201ENST00000306177 NSDHLQ15738 373 aa15.14■□□□□ 0.01
USP42-201ENST00000306177 C22orf42Q6IC83 251 aa15.14■□□□□ 0.01
USP42-201ENST00000306177 KLBQ86Z14 1044 aa15.14■□□□□ 0.01
USP42-201ENST00000306177 KCNN1Q92952 543 aa15.14■□□□□ 0.01
USP42-201ENST00000306177 NEIL2Q969S2 332 aa15.14■□□□□ 0.01
USP42-201ENST00000306177 FAM46AQ96IP4 442 aaKnown RBP15.14■□□□□ 0.01
USP42-201ENST00000306177 EMCNQ9ULC0 261 aa15.14■□□□□ 0.01
USP42-201ENST00000306177 SH2B3Q9UQQ2 575 aa15.14■□□□□ 0.01
USP42-201ENST00000306177 KIAA0513O60268 411 aa15.14■□□□□ 0.01
USP42-201ENST00000306177 SDC1P18827 310 aa15.14■□□□□ 0.01
USP42-201ENST00000306177 DDCP20711 480 aa15.14■□□□□ 0.01
USP42-201ENST00000306177 CREB3L1Q96BA8 519 aa15.14■□□□□ 0.01
USP42-201ENST00000306177 SLC41A3Q96GZ6 507 aa15.14■□□□□ 0.01
USP42-201ENST00000306177 VNN3Q9NY84 501 aa15.14■□□□□ 0.01
USP42-201ENST00000306177 GPR89AB7ZAQ6 455 aa15.13■□□□□ 0.01
USP42-201ENST00000306177 SCGB1D2O95969 90 aa15.13■□□□□ 0.01
USP42-201ENST00000306177 GPR89BP0CG08 455 aa15.13■□□□□ 0.01
USP42-201ENST00000306177 SELENOWP63302 87 aa15.13■□□□□ 0.01
USP42-201ENST00000306177 LRRN1Q6UXK5 716 aa15.13■□□□□ 0.01
USP42-201ENST00000306177 TCEAL4Q96EI5 215 aa15.13■□□□□ 0.01
USP42-201ENST00000306177 OR1F2PQ96R84 312 aa15.13■□□□□ 0.01
USP42-201ENST00000306177 NELL2Q99435 816 aa15.13■□□□□ 0.01
USP42-201ENST00000306177 PITHD1Q9GZP4 211 aaPredicted RBP15.13■□□□□ 0.01
USP42-201ENST00000306177 ZBTB20Q9HC78 741 aaPredicted RBP15.13■□□□□ 0.01
USP42-201ENST00000306177 PCDHGA3Q9Y5H0 932 aa15.13■□□□□ 0.01
USP42-201ENST00000306177 ST14Q9Y5Y6 855 aa15.13■□□□□ 0.01
USP42-201ENST00000306177 TRBV2A0A0J9YWF9 115 aa15.13■□□□□ 0.01
USP42-201ENST00000306177 INMT-MINDY4F8WBC2 141 aa15.13■□□□□ 0.01
USP42-201ENST00000306177 NUAK1O60285 661 aa15.13■□□□□ 0.01
USP42-201ENST00000306177 FCER2P06734 321 aa15.13■□□□□ 0.01
USP42-201ENST00000306177 OSMP13725 252 aa15.13■□□□□ 0.01
USP42-201ENST00000306177 TIMP2P16035 220 aa15.13■□□□□ 0.01
USP42-201ENST00000306177 CERS1P27544 350 aa15.13■□□□□ 0.01
USP42-201ENST00000306177 HOXC13P31276 330 aa15.13■□□□□ 0.01
USP42-201ENST00000306177 S100A10P60903 97 aa15.13■□□□□ 0.01
USP42-201ENST00000306177 DSC1Q08554 894 aa15.13■□□□□ 0.01
USP42-201ENST00000306177 ZNF181Q2M3W8 571 aa15.13■□□□□ 0.01
USP42-201ENST00000306177 C1orf189Q5VU69 101 aa15.13■□□□□ 0.01
USP42-201ENST00000306177 FBXO27Q8NI29 283 aa15.13■□□□□ 0.01
USP42-201ENST00000306177 EPHA6Q9UF33 1036 aa15.13■□□□□ 0.01
USP42-201ENST00000306177 COL18A1P39060 1754 aa15.13■□□□□ 0.01
USP42-201ENST00000306177 VSTM2BA6NLU5 285 aa15.13■□□□□ 0.01
USP42-201ENST00000306177 RGS9O75916 674 aaPredicted RBP15.13■□□□□ 0.01
USP42-201ENST00000306177 ARHGAP19Q14CB8 494 aa15.13■□□□□ 0.01
USP42-201ENST00000306177 LARP4Q71RC2 724 aaKnown RBP eCLIP15.13■□□□□ 0.01
USP42-201ENST00000306177 NRMQ8IXM6 262 aa15.13■□□□□ 0.01
USP42-201ENST00000306177 KLHDC9Q8NEP7 349 aa15.13■□□□□ 0.01
USP42-201ENST00000306177 PHOSPHO2Q8TCD6 241 aa15.13■□□□□ 0.01
USP42-201ENST00000306177 CIDECQ96AQ7 238 aaPredicted RBP15.13■□□□□ 0.01
USP42-201ENST00000306177 CYP17A1P05093 508 aa15.13■□□□□ 0.01
USP42-201ENST00000306177 PRDX3P30048 256 aaKnown RBP15.13■□□□□ 0.01
USP42-201ENST00000306177 PCGF2P35227 344 aa15.13■□□□□ 0.01
USP42-201ENST00000306177 MTNR1AP48039 350 aa15.13■□□□□ 0.01
USP42-201ENST00000306177 PSMA6P60900 246 aaKnown RBP15.13■□□□□ 0.01
USP42-201ENST00000306177 HERV-K104P61576 105 aa15.13■□□□□ 0.01
USP42-201ENST00000306177 LRP8Q14114 963 aa15.13■□□□□ 0.01
USP42-201ENST00000306177 MICAQ29983 383 aa15.13■□□□□ 0.01
USP42-201ENST00000306177 TRIM73Q86UV7 250 aa15.13■□□□□ 0.01
USP42-201ENST00000306177 SLC39A13Q96H72 371 aa15.13■□□□□ 0.01
USP42-201ENST00000306177 METTL2AQ96IZ6 378 aaKnown RBP15.13■□□□□ 0.01
USP42-201ENST00000306177 GPR83Q9NYM4 423 aa15.13■□□□□ 0.01
USP42-201ENST00000306177 CLEC4EQ9ULY5 219 aa15.13■□□□□ 0.01
USP42-201ENST00000306177 PRAMEF26H0Y7S4 382 aa15.13■□□□□ 0.01
USP42-201ENST00000306177 MITFO75030 526 aaPredicted RBP15.13■□□□□ 0.01
USP42-201ENST00000306177 CSF2P04141 144 aa15.13■□□□□ 0.01
USP42-201ENST00000306177 RGRP47804 291 aa15.13■□□□□ 0.01
USP42-201ENST00000306177 CPZQ66K79 652 aa15.13■□□□□ 0.01
USP42-201ENST00000306177 BAIAP2L2Q6UXY1 529 aa15.13■□□□□ 0.01
USP42-201ENST00000306177 CHRDL2Q6WN34 429 aa15.13■□□□□ 0.01
USP42-201ENST00000306177 CREB3L4Q8TEY5 395 aa15.13■□□□□ 0.01
USP42-201ENST00000306177 ZNF431Q8TF32 576 aaPredicted RBP15.13■□□□□ 0.01
USP42-201ENST00000306177 PHOX2BQ99453 314 aa15.13■□□□□ 0.01
USP42-201ENST00000306177 KCNK13Q9HB14 408 aa15.13■□□□□ 0.01
USP42-201ENST00000306177 ZNF334Q9HCZ1 680 aaPredicted RBP15.13■□□□□ 0.01
USP42-201ENST00000306177 FKBP14Q9NWM8 211 aa15.13■□□□□ 0.01
USP42-201ENST00000306177 ABCD2Q9UBJ2 740 aa15.13■□□□□ 0.01
USP42-201ENST00000306177 FTSJ1Q9UET6 329 aa15.13■□□□□ 0.01
USP42-201ENST00000306177 C13orf42A0A1B0GVH6 325 aa15.12■□□□□ 0.01
USP42-201ENST00000306177 ZSCAN5BA6NJL1 495 aa15.12■□□□□ 0.01
USP42-201ENST00000306177 HSPA12AO43301 675 aa15.12■□□□□ 0.01
USP42-201ENST00000306177 T-ENOLP0DO92 83 aa15.12■□□□□ 0.01
USP42-201ENST00000306177 CDK3Q00526 305 aa15.12■□□□□ 0.01
USP42-201ENST00000306177 DEFB110Q30KQ9 67 aa15.12■□□□□ 0.01
USP42-201ENST00000306177 FAM180BQ6P0A1 224 aa15.12■□□□□ 0.01
USP42-201ENST00000306177 PRSS48Q7RTY5 328 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms