RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 MOB1AQ9H8S9 216 aa12.82□□□□□ -0.36
TRIM56-201ENST00000306085 SLC6A5Q9Y345 797 aa12.82□□□□□ -0.36
TRIM56-201ENST00000306085 LRRTM2O43300 516 aa12.81□□□□□ -0.36
TRIM56-201ENST00000306085 BRICD5Q6PL45 260 aa12.81□□□□□ -0.36
TRIM56-201ENST00000306085 NLGN4YQ8NFZ3 816 aaPredicted RBP12.81□□□□□ -0.36
TRIM56-201ENST00000306085 DENND1AQ8TEH3 1009 aa12.81□□□□□ -0.36
TRIM56-201ENST00000306085 REEP6Q96HR9 211 aa12.81□□□□□ -0.36
TRIM56-201ENST00000306085 SPATA31A3Q5VYP0 1347 aa12.81□□□□□ -0.36
TRIM56-201ENST00000306085 Q1RN00 199 aa12.81□□□□□ -0.36
TRIM56-201ENST00000306085 ARL14EPQ8N8R7 260 aaPredicted RBP12.81□□□□□ -0.36
TRIM56-201ENST00000306085 KIAA1143Q96AT1 154 aaPredicted RBP12.81□□□□□ -0.36
TRIM56-201ENST00000306085 RAB9BQ9NP90 201 aa12.81□□□□□ -0.36
TRIM56-201ENST00000306085 HAS3O00219 553 aa12.81□□□□□ -0.36
TRIM56-201ENST00000306085 RAB28P51157 221 aa12.81□□□□□ -0.36
TRIM56-201ENST00000306085 RPL13AP3Q6NVV1 102 aa12.81□□□□□ -0.36
TRIM56-201ENST00000306085 COX15Q7KZN9 410 aa12.81□□□□□ -0.36
TRIM56-201ENST00000306085 LRRC52Q8N7C0 313 aa12.81□□□□□ -0.36
TRIM56-201ENST00000306085 LINC01599Q8WXQ3 324 aa12.81□□□□□ -0.36
TRIM56-201ENST00000306085 PURBQ96QR8 312 aaKnown RBP12.81□□□□□ -0.36
TRIM56-201ENST00000306085 PIP5K1AQ99755 562 aa12.81□□□□□ -0.36
TRIM56-201ENST00000306085 PINK1Q9BXM7 581 aa12.81□□□□□ -0.36
TRIM56-201ENST00000306085 KIF25Q9UIL4 384 aa12.81□□□□□ -0.36
TRIM56-201ENST00000306085 CSKP41240 450 aa12.81□□□□□ -0.36
TRIM56-201ENST00000306085 LRRTM4Q86VH4 590 aa12.81□□□□□ -0.36
TRIM56-201ENST00000306085 HORMAD2Q8N7B1 307 aa12.81□□□□□ -0.36
TRIM56-201ENST00000306085 HHIPL1Q96JK4 782 aa12.81□□□□□ -0.36
TRIM56-201ENST00000306085 SLC6A16Q9GZN6 736 aa12.81□□□□□ -0.36
TRIM56-201ENST00000306085 SDCBP2Q9H190 292 aa12.81□□□□□ -0.36
TRIM56-201ENST00000306085 ZNF355PQ9NSJ1 428 aa12.81□□□□□ -0.36
TRIM56-201ENST00000306085 OR6C2Q9NZP2 312 aa12.81□□□□□ -0.36
TRIM56-201ENST00000306085 LOC102724200A0A096LPH7 203 aaPredicted RBP12.81□□□□□ -0.36
TRIM56-201ENST00000306085 CXCL11O14625 94 aa12.81□□□□□ -0.36
TRIM56-201ENST00000306085 IL32P24001 234 aa12.81□□□□□ -0.36
TRIM56-201ENST00000306085 NNATQ16517 81 aa12.81□□□□□ -0.36
TRIM56-201ENST00000306085 ZNF736B4DX44 427 aaPredicted RBP12.81□□□□□ -0.36
TRIM56-201ENST00000306085 UGT2B7P16662 529 aa12.81□□□□□ -0.36
TRIM56-201ENST00000306085 S100A7P31151 101 aa12.81□□□□□ -0.36
TRIM56-201ENST00000306085 TRIM23P36406 574 aa12.81□□□□□ -0.36
TRIM56-201ENST00000306085 GALEQ14376 348 aa12.81□□□□□ -0.36
TRIM56-201ENST00000306085 SF3A2Q15428 464 aaKnown RBP12.81□□□□□ -0.36
TRIM56-201ENST00000306085 OGFOD3Q6PK18 319 aa12.81□□□□□ -0.36
TRIM56-201ENST00000306085 ZFPM1Q8IX07 1006 aa12.81□□□□□ -0.36
TRIM56-201ENST00000306085 FNDC8Q8TC99 324 aa12.81□□□□□ -0.36
TRIM56-201ENST00000306085 UHRF1Q96T88 793 aaPredicted RBP12.81□□□□□ -0.36
TRIM56-201ENST00000306085 CCM2Q9BSQ5 444 aa12.81□□□□□ -0.36
TRIM56-201ENST00000306085 SSU72Q9NP77 194 aaKnown RBP12.81□□□□□ -0.36
TRIM56-201ENST00000306085 TRAF3IP2O43734 574 aaPredicted RBP12.81□□□□□ -0.36
TRIM56-201ENST00000306085 DPY19L2P1Q6NXN4 242 aa12.81□□□□□ -0.36
TRIM56-201ENST00000306085 FBXW12Q6X9E4 464 aa12.81□□□□□ -0.36
TRIM56-201ENST00000306085 ZNF836Q6ZNA1 936 aa12.81□□□□□ -0.36
TRIM56-201ENST00000306085 CHDHQ8NE62 594 aaPredicted RBP12.81□□□□□ -0.36
TRIM56-201ENST00000306085 MR1Q95460 341 aa12.81□□□□□ -0.36
TRIM56-201ENST00000306085 NAA11Q9BSU3 229 aaPredicted RBP12.81□□□□□ -0.36
TRIM56-201ENST00000306085 FUCA2Q9BTY2 467 aa12.81□□□□□ -0.36
TRIM56-201ENST00000306085 JMJD7P0C870 316 aa12.81□□□□□ -0.36
TRIM56-201ENST00000306085 F2RP25116 425 aa12.81□□□□□ -0.36
TRIM56-201ENST00000306085 SHMT1P34896 483 aa12.81□□□□□ -0.36
TRIM56-201ENST00000306085 HYAL4Q2M3T9 481 aa12.81□□□□□ -0.36
TRIM56-201ENST00000306085 OTOP2Q7RTS6 562 aa12.81□□□□□ -0.36
TRIM56-201ENST00000306085 ERMP1Q7Z2K6 904 aa12.81□□□□□ -0.36
TRIM56-201ENST00000306085 ADGRA1Q86SQ6 560 aa12.81□□□□□ -0.36
TRIM56-201ENST00000306085 TMEM150AQ86TG1 271 aa12.81□□□□□ -0.36
TRIM56-201ENST00000306085 ZDHHC2Q9UIJ5 367 aa12.81□□□□□ -0.36
TRIM56-201ENST00000306085 CSTAP01040 98 aa12.8□□□□□ -0.36
TRIM56-201ENST00000306085 HLA-DOBP13765 273 aa12.8□□□□□ -0.36
TRIM56-201ENST00000306085 SLC6A17Q9H1V8 727 aa12.8□□□□□ -0.36
TRIM56-201ENST00000306085 DNAJB4Q9UDY4 337 aa12.8□□□□□ -0.36
TRIM56-201ENST00000306085 PHYHD1Q5SRE7 291 aa12.8□□□□□ -0.36
TRIM56-201ENST00000306085 METTL11BQ5VVY1 283 aa12.8□□□□□ -0.36
TRIM56-201ENST00000306085 GNB4Q9HAV0 340 aa12.8□□□□□ -0.36
TRIM56-201ENST00000306085 ONECUT3O60422 494 aaPredicted RBP12.8□□□□□ -0.36
TRIM56-201ENST00000306085 FOXD2O60548 495 aaPredicted RBP12.8□□□□□ -0.36
TRIM56-201ENST00000306085 MAFO75444 373 aaPredicted RBP12.8□□□□□ -0.36
TRIM56-201ENST00000306085 PORP16435 677 aaPredicted RBP12.8□□□□□ -0.36
TRIM56-201ENST00000306085 SPOCK1Q08629 439 aa12.8□□□□□ -0.36
TRIM56-201ENST00000306085 FBXO22Q8NEZ5 403 aa12.8□□□□□ -0.36
TRIM56-201ENST00000306085 TMEM14AQ9Y6G1 99 aa12.8□□□□□ -0.36
TRIM56-201ENST00000306085 NEXMIFQ5QGS0 1516 aa12.8□□□□□ -0.36
TRIM56-201ENST00000306085 AGAP14A8MT82 685 aa12.8□□□□□ -0.36
TRIM56-201ENST00000306085 TP53I11O14683 189 aa12.8□□□□□ -0.36
TRIM56-201ENST00000306085 MMP8P22894 467 aa12.8□□□□□ -0.36
TRIM56-201ENST00000306085 CHRNA6Q15825 494 aa12.8□□□□□ -0.36
TRIM56-201ENST00000306085 S100A7AQ86SG5 101 aa12.8□□□□□ -0.36
TRIM56-201ENST00000306085 VWA5B2Q8N398 1253 aa12.8□□□□□ -0.36
TRIM56-201ENST00000306085 LMX1AQ8TE12 382 aa12.8□□□□□ -0.36
TRIM56-201ENST00000306085 KLHL21Q9UJP4 597 aa12.8□□□□□ -0.36
TRIM56-201ENST00000306085 GOLT1BQ9Y3E0 138 aa12.8□□□□□ -0.36
TRIM56-201ENST00000306085 A8MVM7 634 aa12.8□□□□□ -0.36
TRIM56-201ENST00000306085 ETFAP13804 333 aa12.8□□□□□ -0.36
TRIM56-201ENST00000306085 NDUFS1P28331 727 aa12.8□□□□□ -0.36
TRIM56-201ENST00000306085 ADARB1P78563 741 aaKnown RBP12.8□□□□□ -0.36
TRIM56-201ENST00000306085 IL10RBQ08334 325 aa12.8□□□□□ -0.36
TRIM56-201ENST00000306085 SQSTM1Q13501 440 aa12.8□□□□□ -0.36
TRIM56-201ENST00000306085 HERPUD2Q9BSE4 406 aa12.8□□□□□ -0.36
TRIM56-201ENST00000306085 OR51B5Q9H339 312 aa12.8□□□□□ -0.36
TRIM56-201ENST00000306085 IQSEC2Q5JU85 1478 aa12.8□□□□□ -0.36
TRIM56-201ENST00000306085 LIPCP11150 499 aa12.8□□□□□ -0.36
TRIM56-201ENST00000306085 G6PDP11413 515 aa12.8□□□□□ -0.36
TRIM56-201ENST00000306085 GABRR1P24046 479 aa12.8□□□□□ -0.36
TRIM56-201ENST00000306085 SOX9P48436 509 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms