RNA–Protein interactions for RNA: ENST00000299162.9

FOXN4-201, Transcript of forkhead box N4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXN4, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-201ENST00000299162 ZNF793Q6ZN11 406 aa9.55□□□□□ -0.88
FOXN4-201ENST00000299162 KCTD20Q7Z5Y7 419 aa9.55□□□□□ -0.88
FOXN4-201ENST00000299162 NUDT13Q86X67 352 aa9.55□□□□□ -0.88
FOXN4-201ENST00000299162 LURAP1LQ8IV03 231 aa9.55□□□□□ -0.88
FOXN4-201ENST00000299162 RASGRP3Q8IV61 690 aa9.55□□□□□ -0.88
FOXN4-201ENST00000299162 OXR1Q8N573 874 aa9.55□□□□□ -0.88
FOXN4-201ENST00000299162 DEFB119Q8N690 84 aa9.55□□□□□ -0.88
FOXN4-201ENST00000299162 LCN9Q8WX39 176 aa9.55□□□□□ -0.88
FOXN4-201ENST00000299162 FCRL1Q96LA6 429 aa9.55□□□□□ -0.88
FOXN4-201ENST00000299162 AGAP4Q96P64 663 aa9.55□□□□□ -0.88
FOXN4-201ENST00000299162 MS4A8Q9BY19 250 aa9.55□□□□□ -0.88
FOXN4-201ENST00000299162 SYNPO2LQ9H987 977 aa9.55□□□□□ -0.88
FOXN4-201ENST00000299162 ABCB9Q9NP78 766 aa9.55□□□□□ -0.88
FOXN4-201ENST00000299162 SEMA3GQ9NS98 782 aa9.55□□□□□ -0.88
FOXN4-201ENST00000299162 MALT1Q9UDY8 824 aa9.55□□□□□ -0.88
FOXN4-201ENST00000299162 IL20RAQ9UHF4 553 aa9.55□□□□□ -0.88
FOXN4-201ENST00000299162 ATP6V1HQ9UI12 483 aa9.55□□□□□ -0.88
FOXN4-201ENST00000299162 CORO2BQ9UQ03 480 aa9.55□□□□□ -0.88
FOXN4-201ENST00000299162 ATG4BQ9Y4P1 393 aa9.55□□□□□ -0.88
FOXN4-201ENST00000299162 PCDHGA6Q9Y5G7 932 aa9.55□□□□□ -0.88
FOXN4-201ENST00000299162 MAU2Q9Y6X3 613 aa9.55□□□□□ -0.88
FOXN4-201ENST00000299162 IGKV1-8A0A0C4DH67 115 aa9.54□□□□□ -0.88
FOXN4-201ENST00000299162 C17orf113A0A1B0GUU1 675 aa9.54□□□□□ -0.88
FOXN4-201ENST00000299162 A8MUA0 341 aa9.54□□□□□ -0.88
FOXN4-201ENST00000299162 C4orf51C9J302 202 aa9.54□□□□□ -0.88
FOXN4-201ENST00000299162 ADAMDEC1O15204 470 aa9.54□□□□□ -0.88
FOXN4-201ENST00000299162 GASTP01350 101 aa9.54□□□□□ -0.88
FOXN4-201ENST00000299162 DDCP20711 480 aa9.54□□□□□ -0.88
FOXN4-201ENST00000299162 COL9A1P20849 921 aa9.54□□□□□ -0.88
FOXN4-201ENST00000299162 CBLP22681 906 aa9.54□□□□□ -0.88
FOXN4-201ENST00000299162 ACSL1P33121 698 aa9.54□□□□□ -0.88
FOXN4-201ENST00000299162 BSGP35613 385 aa9.54□□□□□ -0.88
FOXN4-201ENST00000299162 SLC15A1P46059 708 aa9.54□□□□□ -0.88
FOXN4-201ENST00000299162 MLLT1Q03111 559 aaPredicted RBP9.54□□□□□ -0.88
FOXN4-201ENST00000299162 LTB4RQ15722 352 aa9.54□□□□□ -0.88
FOXN4-201ENST00000299162 ZNF658BQ4V348 819 aaPredicted RBP9.54□□□□□ -0.88
FOXN4-201ENST00000299162 TMEM196Q5HYL7 178 aa9.54□□□□□ -0.88
FOXN4-201ENST00000299162 SHEQ5VZ18 495 aa9.54□□□□□ -0.88
FOXN4-201ENST00000299162 NUDT18Q6ZVK8 323 aa9.54□□□□□ -0.88
FOXN4-201ENST00000299162 ZNF605Q86T29 641 aa9.54□□□□□ -0.88
FOXN4-201ENST00000299162 LACC1Q8IV20 430 aa9.54□□□□□ -0.88
FOXN4-201ENST00000299162 RGMAQ96B86 450 aa9.54□□□□□ -0.88
FOXN4-201ENST00000299162 OR2B2Q9GZK3 357 aa9.54□□□□□ -0.88
FOXN4-201ENST00000299162 OR51I1Q9H343 314 aa9.54□□□□□ -0.88
FOXN4-201ENST00000299162 EPHX3Q9H6B9 360 aa9.54□□□□□ -0.88
FOXN4-201ENST00000299162 DNAJC27Q9NZQ0 273 aa9.54□□□□□ -0.88
FOXN4-201ENST00000299162 NFKBIL1Q9UBC1 381 aaPredicted RBP9.54□□□□□ -0.88
FOXN4-201ENST00000299162 CPNE7Q9UBL6 633 aa9.54□□□□□ -0.88
FOXN4-201ENST00000299162 PCDHGB6Q9Y5F9 930 aa9.54□□□□□ -0.88
FOXN4-201ENST00000299162 A0A0G2JMP0 313 aa9.54□□□□□ -0.88
FOXN4-201ENST00000299162 A0A1W2PPV9 198 aa9.54□□□□□ -0.88
FOXN4-201ENST00000299162 FAM172BPA6NC97 362 aa9.54□□□□□ -0.88
FOXN4-201ENST00000299162 H3BQ06 376 aaPredicted RBP9.54□□□□□ -0.88
FOXN4-201ENST00000299162 WBP4O75554 376 aaKnown RBP9.54□□□□□ -0.88
FOXN4-201ENST00000299162 PVRP15151 417 aa9.54□□□□□ -0.88
FOXN4-201ENST00000299162 M6PRP20645 277 aa9.54□□□□□ -0.88
FOXN4-201ENST00000299162 UQCRC1P31930 480 aa9.54□□□□□ -0.88
FOXN4-201ENST00000299162 IGFALSP35858 605 aa9.54□□□□□ -0.88
FOXN4-201ENST00000299162 SLC9A3P48764 834 aa9.54□□□□□ -0.88
FOXN4-201ENST00000299162 LIM2P55344 173 aa9.54□□□□□ -0.88
FOXN4-201ENST00000299162 BTN3A2P78410 334 aa9.54□□□□□ -0.88
FOXN4-201ENST00000299162 ALDH6A1Q02252 535 aaKnown RBP9.54□□□□□ -0.88
FOXN4-201ENST00000299162 TOR1AIP1Q5JTV8 583 aa9.54□□□□□ -0.88
FOXN4-201ENST00000299162 REEP3Q6NUK4 255 aa9.54□□□□□ -0.88
FOXN4-201ENST00000299162 LCTLQ6UWM7 567 aa9.54□□□□□ -0.88
FOXN4-201ENST00000299162 UNC5DQ6UXZ4 953 aa9.54□□□□□ -0.88
FOXN4-201ENST00000299162 MSANTD1Q6ZTZ1 278 aa9.54□□□□□ -0.88
FOXN4-201ENST00000299162 KLHDC8AQ8IYD2 350 aa9.54□□□□□ -0.88
FOXN4-201ENST00000299162 RAB42Q8N4Z0 105 aa9.54□□□□□ -0.88
FOXN4-201ENST00000299162 SIMC1Q8NDZ2 872 aa9.54□□□□□ -0.88
FOXN4-201ENST00000299162 TTLQ8NG68 377 aa9.54□□□□□ -0.88
FOXN4-201ENST00000299162 SNAPC3Q92966 411 aa9.54□□□□□ -0.88
FOXN4-201ENST00000299162 SIPA1Q96FS4 1042 aa9.54□□□□□ -0.88
FOXN4-201ENST00000299162 COX14Q96I36 57 aa9.54□□□□□ -0.88
FOXN4-201ENST00000299162 HHIPQ96QV1 700 aa9.54□□□□□ -0.88
FOXN4-201ENST00000299162 ACOT13Q9NPJ3 140 aa9.54□□□□□ -0.88
FOXN4-201ENST00000299162 NECTIN3Q9NQS3 549 aa9.54□□□□□ -0.88
FOXN4-201ENST00000299162 STMN3Q9NZ72 180 aa9.54□□□□□ -0.88
FOXN4-201ENST00000299162 GDE1Q9NZC3 331 aa9.54□□□□□ -0.88
FOXN4-201ENST00000299162 TBC1D29Q9UFV1 150 aa9.54□□□□□ -0.88
FOXN4-201ENST00000299162 C5orf67F2Z3F1 127 aa9.54□□□□□ -0.88
FOXN4-201ENST00000299162 SLC16A6O15403 523 aa9.54□□□□□ -0.88
FOXN4-201ENST00000299162 EGFP01133 1207 aa9.54□□□□□ -0.88
FOXN4-201ENST00000299162 CEACAM5P06731 702 aa9.54□□□□□ -0.88
FOXN4-201ENST00000299162 ACADMP11310 421 aa9.54□□□□□ -0.88
FOXN4-201ENST00000299162 CKMT1AP12532 417 aa9.54□□□□□ -0.88
FOXN4-201ENST00000299162 PIK3CBP42338 1070 aa9.54□□□□□ -0.88
FOXN4-201ENST00000299162 CBX5P45973 191 aa9.54□□□□□ -0.88
FOXN4-201ENST00000299162 PUM1Q14671 1186 aaKnown RBP eCLIP9.54□□□□□ -0.88
FOXN4-201ENST00000299162 CLVS2Q5SYC1 327 aa9.54□□□□□ -0.88
FOXN4-201ENST00000299162 ZNF776Q68DI1 518 aaPredicted RBP9.54□□□□□ -0.88
FOXN4-201ENST00000299162 ZNF544Q6NX49 715 aa9.54□□□□□ -0.88
FOXN4-201ENST00000299162 IDO2Q6ZQW0 420 aa9.54□□□□□ -0.88
FOXN4-201ENST00000299162 OR2A1Q8NGT9 310 aa9.54□□□□□ -0.88
FOXN4-201ENST00000299162 HMGB4Q8WW32 186 aa9.54□□□□□ -0.88
FOXN4-201ENST00000299162 RDH12Q96NR8 316 aa9.54□□□□□ -0.88
FOXN4-201ENST00000299162 HDAC8Q9BY41 377 aa9.54□□□□□ -0.88
FOXN4-201ENST00000299162 TMEM168Q9H0V1 697 aa9.54□□□□□ -0.88
FOXN4-201ENST00000299162 RSPH9Q9H1X1 276 aaPredicted RBP9.54□□□□□ -0.88
FOXN4-201ENST00000299162 CHST8Q9H2A9 424 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms