RNA–Protein interactions for RNA: ENST00000297405.9

CSMD3-201, Transcript of CUB and Sushi multiple domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSMD3, Length 13,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-201ENST00000297405 COPS9Q8WXC6 57 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 MRPL45Q9BRJ2 306 aaKnown RBP4.64□□□□□ -1.67
CSMD3-201ENST00000297405 COLEC11Q9BWP8 271 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 GREM2Q9H772 168 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 B3GAT2Q9NPZ5 323 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 TP53TG5Q9Y2B4 290 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 ANKUB1A6NFN9 424 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 CLN5O75503 358 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 CREG1O75629 220 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 COL6A1P12109 1028 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 DTYMKP23919 212 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 EEF1A1P68104 462 aaKnown RBP4.64□□□□□ -1.67
CSMD3-201ENST00000297405 MGAT5BQ3V5L5 792 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 EEF1A1P5Q5VTE0 462 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 PRSS58Q8IYP2 241 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 HOXB13Q92826 284 aaPredicted RBP4.64□□□□□ -1.67
CSMD3-201ENST00000297405 UHRF2Q96PU4 802 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 TMEM134Q9H6X4 195 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 ISYNA1Q9NPH2 558 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 ASF1AQ9Y294 204 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 RIC1Q4ADV7 1423 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 ZNF878C9JN71 531 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 C17orf112F2Z3M2 114 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 PCDH17O14917 1159 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 ZNF207O43670 478 aaKnown RBP4.64□□□□□ -1.67
CSMD3-201ENST00000297405 GIPP09681 153 aaPredicted RBP4.64□□□□□ -1.67
CSMD3-201ENST00000297405 USP17L8P0C7I0 530 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 BTF3P20290 206 aaKnown RBP4.64□□□□□ -1.67
CSMD3-201ENST00000297405 GYG1P46976 350 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 NKX3-2P78367 333 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 CACNG1Q06432 222 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 CAMK2BQ13554 666 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 ZNF792Q3KQV3 632 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 TBC1D10CQ8IV04 446 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 SLC15A4Q8N697 577 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 OR10Z1Q8NGY1 313 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 NFKBIDQ8NI38 313 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 IFI44Q8TCB0 444 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 GLYATL2Q8WU03 294 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 TFAP2CQ92754 450 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 MICU1Q9BPX6 476 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 ZNF559Q9BR84 538 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 PIN4Q9Y237 131 aaKnown RBP4.64□□□□□ -1.67
CSMD3-201ENST00000297405 AGLP35573 1532 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 BTAF1O14981 1849 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 OR6C74A6NCV1 312 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 TRABD2BA6NFA1 517 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 RPP40O75818 363 aaKnown RBP4.64□□□□□ -1.67
CSMD3-201ENST00000297405 MSX2P35548 267 aaPredicted RBP4.64□□□□□ -1.67
CSMD3-201ENST00000297405 KLK7P49862 253 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 CLCQ05315 142 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 KIAA1211LQ6NV74 962 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 SEZ6L2Q6UXD5 910 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 ZNF704Q6ZNC4 412 aaPredicted RBP4.64□□□□□ -1.67
CSMD3-201ENST00000297405 ZNF620Q6ZNG0 422 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 MARCH9Q86YJ5 346 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 OR56A3Q8NH54 315 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 DNASE1L2Q92874 299 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 ZNF778Q96MU6 729 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 LYSMD1Q96S90 227 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 SEMA6BQ9H3T3 888 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 KCNG2Q9UJ96 466 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 PRSS51A0A1B0GVH4 220 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 ANKRD34BA5PLL1 514 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 A6NDN8 102 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 MMP20O60882 483 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 PMS2P2O95744 297 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 ADH1CP00326 375 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 LTFP02788 710 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 AMY2BP19961 511 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 LAP3P28838 519 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 PSEN2P49810 448 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 PIGPP57054 158 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 ANTXR2P58335 489 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 EEF1A2Q05639 463 aaKnown RBP4.64□□□□□ -1.67
CSMD3-201ENST00000297405 MFSD13AQ14CX5 517 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 PHYHD1Q5SRE7 291 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 DESI1Q6ICB0 168 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 CRTC1Q6UUV9 634 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 TRMT11Q7Z4G4 463 aaKnown RBP4.64□□□□□ -1.67
CSMD3-201ENST00000297405 ADGRF3Q8IZF5 1079 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 TEX26Q8N6G2 289 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 AKR7LQ8NHP1 331 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 TRMT10AQ8TBZ6 339 aaKnown RBP4.64□□□□□ -1.67
CSMD3-201ENST00000297405 CANT1Q8WVQ1 401 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 MARVELD3Q96A59 401 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 LINGO1Q96FE5 620 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 BORCS8Q96FH0 119 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 SLC25A51Q9H1U9 297 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 SDHAF3Q9NRP4 125 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 FAM118AQ9NWS6 357 aa4.64□□□□□ -1.67
CSMD3-201ENST00000297405 KCNU1A8MYU2 1149 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 MAGP20916 626 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 CRHBPP24387 322 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 BDKRB1P46663 353 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 MEOX2P50222 304 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 PKIAP61925 76 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 POU6F2P78424 691 aaPredicted RBP4.63□□□□□ -1.67
CSMD3-201ENST00000297405 DMWDQ09019 674 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 CRHR2Q13324 411 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms