RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 MFN2O95140 757 aa14.56□□□□□ -0.08
LSM6-201ENST00000296581 SP9P0CG40 484 aa14.56□□□□□ -0.08
LSM6-201ENST00000296581 CDH2P19022 906 aaPredicted RBP14.56□□□□□ -0.08
LSM6-201ENST00000296581 PPP2R1BP30154 601 aa14.56□□□□□ -0.08
LSM6-201ENST00000296581 GCGRP47871 477 aa14.56□□□□□ -0.08
LSM6-201ENST00000296581 AVPR1BP47901 424 aa14.56□□□□□ -0.08
LSM6-201ENST00000296581 ARL4DP49703 201 aa14.56□□□□□ -0.08
LSM6-201ENST00000296581 ENTPD1P49961 510 aa14.56□□□□□ -0.08
LSM6-201ENST00000296581 FUT5Q11128 374 aa14.56□□□□□ -0.08
LSM6-201ENST00000296581 GUSBP11Q6P575 273 aa14.56□□□□□ -0.08
LSM6-201ENST00000296581 SLC23A3Q6PIS1 610 aa14.56□□□□□ -0.08
LSM6-201ENST00000296581 FAM111BQ6SJ93 734 aa14.56□□□□□ -0.08
LSM6-201ENST00000296581 STK32CQ86UX6 486 aa14.56□□□□□ -0.08
LSM6-201ENST00000296581 SLC44A2Q8IWA5 706 aaPredicted RBP14.56□□□□□ -0.08
LSM6-201ENST00000296581 PEX5LQ8IYB4 626 aa14.56□□□□□ -0.08
LSM6-201ENST00000296581 MAGEE2Q8TD90 523 aaPredicted RBP14.56□□□□□ -0.08
LSM6-201ENST00000296581 TFAP2CQ92754 450 aa14.56□□□□□ -0.08
LSM6-201ENST00000296581 SDCCAG3Q96C92 435 aa14.56□□□□□ -0.08
LSM6-201ENST00000296581 OR7D2Q96RA2 312 aa14.56□□□□□ -0.08
LSM6-201ENST00000296581 TREX2Q9BQ50 279 aaPredicted RBP14.56□□□□□ -0.08
LSM6-201ENST00000296581 YIPF4Q9BSR8 244 aa14.56□□□□□ -0.08
LSM6-201ENST00000296581 ACTRT3Q9BYD9 372 aa14.56□□□□□ -0.08
LSM6-201ENST00000296581 ANKRA2Q9H9E1 313 aa14.56□□□□□ -0.08
LSM6-201ENST00000296581 THSD1Q9NS62 852 aa14.56□□□□□ -0.08
LSM6-201ENST00000296581 SMPD3Q9NY59 655 aaPredicted RBP14.56□□□□□ -0.08
LSM6-201ENST00000296581 USE1Q9NZ43 259 aa14.56□□□□□ -0.08
LSM6-201ENST00000296581 HCN3Q9P1Z3 774 aa14.56□□□□□ -0.08
LSM6-201ENST00000296581 MAGED1Q9Y5V3 778 aaPredicted RBP14.56□□□□□ -0.08
LSM6-201ENST00000296581 CEPT1Q9Y6K0 416 aa14.56□□□□□ -0.08
LSM6-201ENST00000296581 CASC3O15234 703 aaKnown RBP14.55□□□□□ -0.08
LSM6-201ENST00000296581 ALPLP05186 524 aa14.55□□□□□ -0.08
LSM6-201ENST00000296581 NELFEP18615 380 aaKnown RBP14.55□□□□□ -0.08
LSM6-201ENST00000296581 CD247P20963 164 aa14.55□□□□□ -0.08
LSM6-201ENST00000296581 STT3AP46977 705 aa14.55□□□□□ -0.08
LSM6-201ENST00000296581 PERM1Q5SV97 790 aa14.55□□□□□ -0.08
LSM6-201ENST00000296581 OTUD3Q5T2D3 398 aaPredicted RBP14.55□□□□□ -0.08
LSM6-201ENST00000296581 PRAMEF8Q5VWM4 474 aa14.55□□□□□ -0.08
LSM6-201ENST00000296581 PRAMEF7Q5VXH5 474 aa14.55□□□□□ -0.08
LSM6-201ENST00000296581 MFSD12Q6NUT3 480 aa14.55□□□□□ -0.08
LSM6-201ENST00000296581 TMEM71Q6P5X7 295 aa14.55□□□□□ -0.08
LSM6-201ENST00000296581 SHQ1Q6PI26 577 aaKnown RBP14.55□□□□□ -0.08
LSM6-201ENST00000296581 HIPK1Q86Z02 1210 aa14.55□□□□□ -0.08
LSM6-201ENST00000296581 ZNF595Q8IYB9 648 aa14.55□□□□□ -0.08
LSM6-201ENST00000296581 SLC7A5P1Q8MH63 180 aa14.55□□□□□ -0.08
LSM6-201ENST00000296581 BBS10Q8TAM1 723 aa14.55□□□□□ -0.08
LSM6-201ENST00000296581 SPPL2AQ8TCT8 520 aa14.55□□□□□ -0.08
LSM6-201ENST00000296581 GEMIN6Q8WXD5 167 aaKnown RBP14.55□□□□□ -0.08
LSM6-201ENST00000296581 ZNF768Q9H5H4 540 aaKnown RBP14.55□□□□□ -0.08
LSM6-201ENST00000296581 C19orf53Q9UNZ5 99 aaPredicted RBP14.55□□□□□ -0.08
LSM6-201ENST00000296581 HEMK1Q9Y5R4 338 aaPredicted RBP14.55□□□□□ -0.08
LSM6-201ENST00000296581 NOX1Q9Y5S8 564 aa14.55□□□□□ -0.08
LSM6-201ENST00000296581 PRAMEF25A6NGN4 478 aa14.55□□□□□ -0.08
LSM6-201ENST00000296581 TMEM150CB9EJG8 249 aa14.55□□□□□ -0.08
LSM6-201ENST00000296581 ARHGAP33O14559 1287 aa14.55□□□□□ -0.08
LSM6-201ENST00000296581 PLOD3O60568 738 aa14.55□□□□□ -0.08
LSM6-201ENST00000296581 OR2B3O76000 313 aa14.55□□□□□ -0.08
LSM6-201ENST00000296581 CER1O95813 267 aa14.55□□□□□ -0.08
LSM6-201ENST00000296581 SLC35E2P0CK97 266 aa14.55□□□□□ -0.08
LSM6-201ENST00000296581 NR2F1P10589 423 aa14.55□□□□□ -0.08
LSM6-201ENST00000296581 ATP6V1B1P15313 513 aa14.55□□□□□ -0.08
LSM6-201ENST00000296581 CRISP3P54108 245 aa14.55□□□□□ -0.08
LSM6-201ENST00000296581 IGLV3-21P80748 117 aaPredicted RBP14.55□□□□□ -0.08
LSM6-201ENST00000296581 PPP2R2BQ00005 443 aa14.55□□□□□ -0.08
LSM6-201ENST00000296581 MGAT2Q10469 447 aa14.55□□□□□ -0.08
LSM6-201ENST00000296581 GNA13Q14344 377 aa14.55□□□□□ -0.08
LSM6-201ENST00000296581 PRICKLE4Q2TBC4 344 aa14.55□□□□□ -0.08
LSM6-201ENST00000296581 FAM214AQ32MH5 1076 aa14.55□□□□□ -0.08
LSM6-201ENST00000296581 TRIM61Q5EBN2 209 aa14.55□□□□□ -0.08
LSM6-201ENST00000296581 SNAP47Q5SQN1 464 aa14.55□□□□□ -0.08
LSM6-201ENST00000296581 CARM1Q86X55 608 aa14.55□□□□□ -0.08
LSM6-201ENST00000296581 ZNF607Q96SK3 696 aa14.55□□□□□ -0.08
LSM6-201ENST00000296581 ADI1Q9BV57 179 aa14.55□□□□□ -0.08
LSM6-201ENST00000296581 NDEL1Q9GZM8 345 aa14.55□□□□□ -0.08
LSM6-201ENST00000296581 GABARAPL1Q9H0R8 117 aa14.55□□□□□ -0.08
LSM6-201ENST00000296581 RUBCNLQ9H714 662 aa14.55□□□□□ -0.08
LSM6-201ENST00000296581 NDUFAF4Q9P032 175 aa14.55□□□□□ -0.08
LSM6-201ENST00000296581 IFT80Q9P2H3 777 aaPredicted RBP14.55□□□□□ -0.08
LSM6-201ENST00000296581 MRPS33Q9Y291 106 aaKnown RBP14.55□□□□□ -0.08
LSM6-201ENST00000296581 CPED1A4D0V7 1026 aa14.54□□□□□ -0.08
LSM6-201ENST00000296581 H3BSA7 217 aa14.54□□□□□ -0.08
LSM6-201ENST00000296581 PCDHGA12O60330 932 aa14.54□□□□□ -0.08
LSM6-201ENST00000296581 CTNSO60931 367 aa14.54□□□□□ -0.08
LSM6-201ENST00000296581 DIRAS1O95057 198 aa14.54□□□□□ -0.08
LSM6-201ENST00000296581 RECKO95980 971 aa14.54□□□□□ -0.08
LSM6-201ENST00000296581 MAT1AQ00266 395 aaKnown RBP14.54□□□□□ -0.08
LSM6-201ENST00000296581 MERTKQ12866 999 aa14.54□□□□□ -0.08
LSM6-201ENST00000296581 DUSP7Q16829 419 aa14.54□□□□□ -0.08
LSM6-201ENST00000296581 EXOSC6Q5RKV6 272 aaKnown RBP14.54□□□□□ -0.08
LSM6-201ENST00000296581 CDC73Q6P1J9 531 aa14.54□□□□□ -0.08
LSM6-201ENST00000296581 OR1L3Q8NH93 324 aa14.54□□□□□ -0.08
LSM6-201ENST00000296581 APOBEC4Q8WW27 367 aaKnown RBP14.54□□□□□ -0.08
LSM6-201ENST00000296581 CTHRC1Q96CG8 243 aa14.54□□□□□ -0.08
LSM6-201ENST00000296581 MMABQ96EY8 250 aaPredicted RBP14.54□□□□□ -0.08
LSM6-201ENST00000296581 NRBF2Q96F24 287 aa14.54□□□□□ -0.08
LSM6-201ENST00000296581 OTUB1Q96FW1 271 aaPredicted RBP14.54□□□□□ -0.08
LSM6-201ENST00000296581 PEX11GQ96HA9 241 aa14.54□□□□□ -0.08
LSM6-201ENST00000296581 RSPO3Q9BXY4 272 aaPredicted RBP14.54□□□□□ -0.08
LSM6-201ENST00000296581 ANKRD60Q9BZ19 345 aa14.54□□□□□ -0.08
LSM6-201ENST00000296581 EQTNQ9NQ60 294 aa14.54□□□□□ -0.08
LSM6-201ENST00000296581 CUTCQ9NTM9 273 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms