RNA–Protein interactions for RNA: ENST00000296302.11

PBRM1-201, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-201ENST00000296302 SHMT2P34897 504 aa10.5□□□□□ -0.73
PBRM1-201ENST00000296302 PTH2RP49190 550 aa10.5□□□□□ -0.73
PBRM1-201ENST00000296302 WNT7BP56706 349 aa10.5□□□□□ -0.73
PBRM1-201ENST00000296302 NOGQ13253 232 aa10.5□□□□□ -0.73
PBRM1-201ENST00000296302 TATDN3Q17R31 274 aa10.5□□□□□ -0.73
PBRM1-201ENST00000296302 C3P1Q6ZMU1 363 aa10.5□□□□□ -0.73
PBRM1-201ENST00000296302 C12orf40Q86WS4 652 aa10.5□□□□□ -0.73
PBRM1-201ENST00000296302 CD200R1Q8TD46 325 aa10.5□□□□□ -0.73
PBRM1-201ENST00000296302 FAM46BQ96A09 425 aa10.5□□□□□ -0.73
PBRM1-201ENST00000296302 PNPLA2Q96AD5 504 aa10.5□□□□□ -0.73
PBRM1-201ENST00000296302 CNTNAP3BQ96NU0 1288 aa10.5□□□□□ -0.73
PBRM1-201ENST00000296302 THSD1Q9NS62 852 aa10.5□□□□□ -0.73
PBRM1-201ENST00000296302 CLEC4EQ9ULY5 219 aa10.5□□□□□ -0.73
PBRM1-201ENST00000296302 IRS2Q9Y4H2 1338 aa10.5□□□□□ -0.73
PBRM1-201ENST00000296302 BMP4P12644 408 aa10.5□□□□□ -0.73
PBRM1-201ENST00000296302 SOX4Q06945 474 aaPredicted RBP10.5□□□□□ -0.73
PBRM1-201ENST00000296302 GDF6Q6KF10 455 aaPredicted RBP10.5□□□□□ -0.73
PBRM1-201ENST00000296302 IQCF1Q8N6M8 205 aa10.5□□□□□ -0.73
PBRM1-201ENST00000296302 OR4C15Q8NGM1 316 aa10.5□□□□□ -0.73
PBRM1-201ENST00000296302 OR14K1Q8NGZ2 314 aa10.5□□□□□ -0.73
PBRM1-201ENST00000296302 PROKR1Q8TCW9 393 aa10.5□□□□□ -0.73
PBRM1-201ENST00000296302 SCGB1C1Q8TD33 95 aa10.5□□□□□ -0.73
PBRM1-201ENST00000296302 FAM46AQ96IP4 442 aaKnown RBP10.5□□□□□ -0.73
PBRM1-201ENST00000296302 OR2M2Q96R28 347 aa10.5□□□□□ -0.73
PBRM1-201ENST00000296302 ARHGAP39Q9C0H5 1083 aa10.5□□□□□ -0.73
PBRM1-201ENST00000296302 C20orf27Q9GZN8 174 aa10.5□□□□□ -0.73
PBRM1-201ENST00000296302 TMEM98Q9Y2Y6 226 aa10.5□□□□□ -0.73
PBRM1-201ENST00000296302 TEX51A0A1B0GUA7 166 aa10.49□□□□□ -0.73
PBRM1-201ENST00000296302 EEF1E1-BLOC1S5C9J1V9 151 aa10.49□□□□□ -0.73
PBRM1-201ENST00000296302 RNASET2O00584 256 aaKnown RBP10.49□□□□□ -0.73
PBRM1-201ENST00000296302 SLC22A5O76082 557 aa10.49□□□□□ -0.73
PBRM1-201ENST00000296302 TAS2R38P59533 333 aa10.49□□□□□ -0.73
PBRM1-201ENST00000296302 MLLT11Q13015 90 aaPredicted RBP10.49□□□□□ -0.73
PBRM1-201ENST00000296302 SLAMF1Q13291 335 aa10.49□□□□□ -0.73
PBRM1-201ENST00000296302 SELPLGQ14242 412 aa10.49□□□□□ -0.73
PBRM1-201ENST00000296302 CDK10Q15131 360 aa10.49□□□□□ -0.73
PBRM1-201ENST00000296302 C18orf21Q32NC0 220 aaPredicted RBP10.49□□□□□ -0.73
PBRM1-201ENST00000296302 HAVCR2Q8TDQ0 301 aa10.49□□□□□ -0.73
PBRM1-201ENST00000296302 ZDHHC1Q8WTX9 485 aa10.49□□□□□ -0.73
PBRM1-201ENST00000296302 TMEM174Q8WUU8 243 aa10.49□□□□□ -0.73
PBRM1-201ENST00000296302 METTL2AQ96IZ6 378 aaKnown RBP10.49□□□□□ -0.73
PBRM1-201ENST00000296302 DEFB118Q96PH6 123 aa10.49□□□□□ -0.73
PBRM1-201ENST00000296302 F2RL3Q96RI0 385 aa10.49□□□□□ -0.73
PBRM1-201ENST00000296302 BRF2Q9HAW0 419 aa10.49□□□□□ -0.73
PBRM1-201ENST00000296302 PRODH2Q9UF12 536 aa10.49□□□□□ -0.73
PBRM1-201ENST00000296302 KCNK6Q9Y257 313 aa10.49□□□□□ -0.73
PBRM1-201ENST00000296302 GPR52Q9Y2T5 361 aa10.49□□□□□ -0.73
PBRM1-201ENST00000296302 SOX1O00570 391 aaPredicted RBP10.49□□□□□ -0.73
PBRM1-201ENST00000296302 COCHO43405 550 aa10.49□□□□□ -0.73
PBRM1-201ENST00000296302 FKTNO75072 461 aa10.49□□□□□ -0.73
PBRM1-201ENST00000296302 CSTAP01040 98 aa10.49□□□□□ -0.73
PBRM1-201ENST00000296302 AMY2AP04746 511 aa10.49□□□□□ -0.73
PBRM1-201ENST00000296302 TYRP14679 529 aa10.49□□□□□ -0.73
PBRM1-201ENST00000296302 TNFRSF1BP20333 461 aa10.49□□□□□ -0.73
PBRM1-201ENST00000296302 IL32P24001 234 aa10.49□□□□□ -0.73
PBRM1-201ENST00000296302 IL4RP24394 825 aa10.49□□□□□ -0.73
PBRM1-201ENST00000296302 KRBOX4Q5JUW0 171 aa10.49□□□□□ -0.73
PBRM1-201ENST00000296302 METAP1DQ6UB28 335 aaPredicted RBP10.49□□□□□ -0.73
PBRM1-201ENST00000296302 KDELC1Q6UW63 502 aa10.49□□□□□ -0.73
PBRM1-201ENST00000296302 SSX6Q7RTT6 188 aa10.49□□□□□ -0.73
PBRM1-201ENST00000296302 COMMD6Q7Z4G1 85 aa10.49□□□□□ -0.73
PBRM1-201ENST00000296302 LRRC25Q8N386 305 aaPredicted RBP10.49□□□□□ -0.73
PBRM1-201ENST00000296302 OR5T2Q8NGG2 359 aa10.49□□□□□ -0.73
PBRM1-201ENST00000296302 C3orf30Q96M34 536 aa10.49□□□□□ -0.73
PBRM1-201ENST00000296302 JSRP1Q96MG2 331 aaPredicted RBP10.49□□□□□ -0.73
PBRM1-201ENST00000296302 BIN3Q9NQY0 253 aa10.49□□□□□ -0.73
PBRM1-201ENST00000296302 TREX1Q9NSU2 369 aa10.49□□□□□ -0.73
PBRM1-201ENST00000296302 CD300AQ9UGN4 299 aa10.49□□□□□ -0.73
PBRM1-201ENST00000296302 OR6C74A6NCV1 312 aa10.49□□□□□ -0.73
PBRM1-201ENST00000296302 A8MUA0 341 aa10.49□□□□□ -0.73
PBRM1-201ENST00000296302 TTC34A8MYJ7 566 aa10.49□□□□□ -0.73
PBRM1-201ENST00000296302 UBFD1O14562 309 aaKnown RBP10.49□□□□□ -0.73
PBRM1-201ENST00000296302 IFNA1P01562 189 aa10.49□□□□□ -0.73
PBRM1-201ENST00000296302 ALDOBP05062 364 aa10.49□□□□□ -0.73
PBRM1-201ENST00000296302 H2BFMP0C1H6 154 aa10.49□□□□□ -0.73
PBRM1-201ENST00000296302 GABRA3P34903 492 aa10.49□□□□□ -0.73
PBRM1-201ENST00000296302 POU4F3Q15319 338 aa10.49□□□□□ -0.73
PBRM1-201ENST00000296302 ZNF805Q5CZA5 627 aa10.49□□□□□ -0.73
PBRM1-201ENST00000296302 AADACL4Q5VUY2 407 aa10.49□□□□□ -0.73
PBRM1-201ENST00000296302 MTFR2Q6P444 385 aa10.49□□□□□ -0.73
PBRM1-201ENST00000296302 CBLL1Q75N03 491 aa10.49□□□□□ -0.73
PBRM1-201ENST00000296302 CEP68Q76N32 757 aa10.49□□□□□ -0.73
PBRM1-201ENST00000296302 SHFQ7M4L6 423 aa10.49□□□□□ -0.73
PBRM1-201ENST00000296302 LNX2Q8N448 690 aa10.49□□□□□ -0.73
PBRM1-201ENST00000296302 RELTQ969Z4 430 aa10.49□□□□□ -0.73
PBRM1-201ENST00000296302 DHRS1Q96LJ7 313 aa10.49□□□□□ -0.73
PBRM1-201ENST00000296302 ZNF649Q9BS31 505 aa10.49□□□□□ -0.73
PBRM1-201ENST00000296302 ALG8Q9BVK2 526 aa10.49□□□□□ -0.73
PBRM1-201ENST00000296302 MED1Q15648 1581 aaPredicted RBP10.49□□□□□ -0.73
PBRM1-201ENST00000296302 MYH15Q9Y2K3 1946 aa10.49□□□□□ -0.73
PBRM1-201ENST00000296302 ACOT7O00154 380 aa10.49□□□□□ -0.73
PBRM1-201ENST00000296302 SULT1C2O00338 296 aa10.49□□□□□ -0.73
PBRM1-201ENST00000296302 SPDEFO95238 335 aa10.49□□□□□ -0.73
PBRM1-201ENST00000296302 ADRB3P13945 408 aa10.49□□□□□ -0.73
PBRM1-201ENST00000296302 ENDOUP21128 410 aaKnown RBP10.49□□□□□ -0.73
PBRM1-201ENST00000296302 TUBG1P23258 451 aa10.49□□□□□ -0.73
PBRM1-201ENST00000296302 PRSS3P35030 304 aa10.49□□□□□ -0.73
PBRM1-201ENST00000296302 ETV3P41162 512 aa10.49□□□□□ -0.73
PBRM1-201ENST00000296302 ZNF616Q08AN1 781 aa10.49□□□□□ -0.73
PBRM1-201ENST00000296302 BEST4Q8NFU0 473 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms