RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 SLC10A2Q12908 348 aaPredicted RBP10.82□□□□□ -0.68
NPC1L1-201ENST00000289547 GRIK2Q13002 908 aa10.82□□□□□ -0.68
NPC1L1-201ENST00000289547 GINS1Q14691 196 aa10.82□□□□□ -0.68
NPC1L1-201ENST00000289547 OXA1LQ15070 435 aa10.82□□□□□ -0.68
NPC1L1-201ENST00000289547 CDK10Q15131 360 aa10.82□□□□□ -0.68
NPC1L1-201ENST00000289547 TATDN3Q17R31 274 aa10.82□□□□□ -0.68
NPC1L1-201ENST00000289547 PROX2Q3B8N5 592 aa10.82□□□□□ -0.68
NPC1L1-201ENST00000289547 TRIM61Q5EBN2 209 aa10.82□□□□□ -0.68
NPC1L1-201ENST00000289547 NDUFAF5Q5TEU4 345 aa10.82□□□□□ -0.68
NPC1L1-201ENST00000289547 FRG2Q64ET8 278 aa10.82□□□□□ -0.68
NPC1L1-201ENST00000289547 NADSYN1Q6IA69 706 aa10.82□□□□□ -0.68
NPC1L1-201ENST00000289547 PARS2Q7L3T8 475 aaKnown RBP10.82□□□□□ -0.68
NPC1L1-201ENST00000289547 LRRC70Q7Z2Q7 622 aa10.82□□□□□ -0.68
NPC1L1-201ENST00000289547 CHFRQ96EP1 664 aa10.82□□□□□ -0.68
NPC1L1-201ENST00000289547 SGTBQ96EQ0 304 aa10.82□□□□□ -0.68
NPC1L1-201ENST00000289547 FRG2BQ96QU4 278 aa10.82□□□□□ -0.68
NPC1L1-201ENST00000289547 DERL2Q9GZP9 239 aa10.82□□□□□ -0.68
NPC1L1-201ENST00000289547 FBXL3Q9UKT7 428 aa10.82□□□□□ -0.68
NPC1L1-201ENST00000289547 PLEKHA6Q9Y2H5 1048 aa10.82□□□□□ -0.68
NPC1L1-201ENST00000289547 PREPP48147 710 aa10.82□□□□□ -0.68
NPC1L1-201ENST00000289547 GPR19Q15760 415 aa10.82□□□□□ -0.68
NPC1L1-201ENST00000289547 ESCO2Q56NI9 601 aa10.82□□□□□ -0.68
NPC1L1-201ENST00000289547 ARHGAP40Q5TG30 622 aa10.82□□□□□ -0.68
NPC1L1-201ENST00000289547 CRTC1Q6UUV9 634 aa10.82□□□□□ -0.68
NPC1L1-201ENST00000289547 LHFPL3Q86UP9 236 aa10.82□□□□□ -0.68
NPC1L1-201ENST00000289547 CBARPQ8N350 705 aaPredicted RBP10.82□□□□□ -0.68
NPC1L1-201ENST00000289547 ZFP41Q8N8Y5 198 aa10.82□□□□□ -0.68
NPC1L1-201ENST00000289547 OR8K3Q8NH51 312 aa10.82□□□□□ -0.68
NPC1L1-201ENST00000289547 CD300LFQ8TDQ1 290 aa10.82□□□□□ -0.68
NPC1L1-201ENST00000289547 TXNDC15Q96J42 360 aa10.82□□□□□ -0.68
NPC1L1-201ENST00000289547 C7orf34Q96L11 122 aa10.82□□□□□ -0.68
NPC1L1-201ENST00000289547 HDAC8Q9BY41 377 aa10.82□□□□□ -0.68
NPC1L1-201ENST00000289547 KCNH6Q9H252 994 aa10.82□□□□□ -0.68
NPC1L1-201ENST00000289547 GLS2Q9UI32 602 aa10.82□□□□□ -0.68
NPC1L1-201ENST00000289547 EMCNQ9ULC0 261 aa10.82□□□□□ -0.68
NPC1L1-201ENST00000289547 ERVK-19Q9WJR5 959 aa10.82□□□□□ -0.68
NPC1L1-201ENST00000289547 SH3D21A4FU49 640 aa10.81□□□□□ -0.68
NPC1L1-201ENST00000289547 SGCEO43556 437 aa10.81□□□□□ -0.68
NPC1L1-201ENST00000289547 SDC3O75056 442 aa10.81□□□□□ -0.68
NPC1L1-201ENST00000289547 GRK5P34947 590 aa10.81□□□□□ -0.68
NPC1L1-201ENST00000289547 TAGLNQ01995 201 aaKnown RBP10.81□□□□□ -0.68
NPC1L1-201ENST00000289547 DSG2Q14126 1118 aa10.81□□□□□ -0.68
NPC1L1-201ENST00000289547 QSOX2Q6ZRP7 698 aa10.81□□□□□ -0.68
NPC1L1-201ENST00000289547 GALNT10Q86SR1 603 aa10.81□□□□□ -0.68
NPC1L1-201ENST00000289547 KRTCAP2Q8N6L1 136 aa10.81□□□□□ -0.68
NPC1L1-201ENST00000289547 C1orf52Q8N6N3 182 aaKnown RBP10.81□□□□□ -0.68
NPC1L1-201ENST00000289547 ATP6V1C2Q8NEY4 427 aa10.81□□□□□ -0.68
NPC1L1-201ENST00000289547 OR6K6Q8NGW6 343 aa10.81□□□□□ -0.68
NPC1L1-201ENST00000289547 KCNJ9Q92806 393 aa10.81□□□□□ -0.68
NPC1L1-201ENST00000289547 TMEM125Q96AQ2 219 aa10.81□□□□□ -0.68
NPC1L1-201ENST00000289547 HDHD5Q9BXW7 423 aa10.81□□□□□ -0.68
NPC1L1-201ENST00000289547 IFT46Q9NQC8 304 aa10.81□□□□□ -0.68
NPC1L1-201ENST00000289547 MUTYHQ9UIF7 546 aa10.81□□□□□ -0.68
NPC1L1-201ENST00000289547 PCDHB14Q9Y5E9 798 aa10.81□□□□□ -0.68
NPC1L1-201ENST00000289547 CFAP20Q9Y6A4 193 aaKnown RBP10.81□□□□□ -0.68
NPC1L1-201ENST00000289547 C1orf196B1AJZ1 125 aa10.81□□□□□ -0.68
NPC1L1-201ENST00000289547 SAP18O00422 153 aaKnown RBP10.81□□□□□ -0.68
NPC1L1-201ENST00000289547 ITGA10O75578 1167 aa10.81□□□□□ -0.68
NPC1L1-201ENST00000289547 LDOC1O95751 146 aaPredicted RBP10.81□□□□□ -0.68
NPC1L1-201ENST00000289547 SSTR2P30874 369 aa10.81□□□□□ -0.68
NPC1L1-201ENST00000289547 HHEXQ03014 270 aa10.81□□□□□ -0.68
NPC1L1-201ENST00000289547 ZNF542PQ5EBM4 170 aa10.81□□□□□ -0.68
NPC1L1-201ENST00000289547 PAGE3Q5JUK9 113 aa10.81□□□□□ -0.68
NPC1L1-201ENST00000289547 SLC30A6Q6NXT4 461 aa10.81□□□□□ -0.68
NPC1L1-201ENST00000289547 ZNF627Q7L945 461 aa10.81□□□□□ -0.68
NPC1L1-201ENST00000289547 NPWQ8N729 165 aa10.81□□□□□ -0.68
NPC1L1-201ENST00000289547 FAM83FQ8NEG4 500 aaPredicted RBP10.81□□□□□ -0.68
NPC1L1-201ENST00000289547 OR8K5Q8NH50 307 aa10.81□□□□□ -0.68
NPC1L1-201ENST00000289547 SLC35G5Q96KT7 338 aa10.81□□□□□ -0.68
NPC1L1-201ENST00000289547 C7orf50Q9BRJ6 194 aaKnown RBP10.81□□□□□ -0.68
NPC1L1-201ENST00000289547 GLTPQ9NZD2 209 aa10.81□□□□□ -0.68
NPC1L1-201ENST00000289547 CAPN5O15484 640 aaPredicted RBP10.81□□□□□ -0.68
NPC1L1-201ENST00000289547 SMAD6O43541 496 aaKnown RBP10.81□□□□□ -0.68
NPC1L1-201ENST00000289547 CHP2O43745 196 aa10.81□□□□□ -0.68
NPC1L1-201ENST00000289547 BCHEP06276 602 aa10.81□□□□□ -0.68
NPC1L1-201ENST00000289547 ZDHHC11BP0C7U3 371 aa10.81□□□□□ -0.68
NPC1L1-201ENST00000289547 SH3BP2P78314 561 aa10.81□□□□□ -0.68
NPC1L1-201ENST00000289547 ZNF252P-AS1Q0IIN9 211 aa10.81□□□□□ -0.68
NPC1L1-201ENST00000289547 AIMP2Q13155 320 aaKnown RBP10.81□□□□□ -0.68
NPC1L1-201ENST00000289547 EXOC3L2Q2M3D2 409 aa10.81□□□□□ -0.68
NPC1L1-201ENST00000289547 SFRP4Q6FHJ7 346 aaPredicted RBP10.81□□□□□ -0.68
NPC1L1-201ENST00000289547 VTCN1Q7Z7D3 282 aa10.81□□□□□ -0.68
NPC1L1-201ENST00000289547 SDR16C5Q8N3Y7 309 aa10.81□□□□□ -0.68
NPC1L1-201ENST00000289547 C15orf40Q8WUR7 153 aa10.81□□□□□ -0.68
NPC1L1-201ENST00000289547 FGF14Q92915 247 aa10.81□□□□□ -0.68
NPC1L1-201ENST00000289547 OR4K3Q96R72 315 aa10.81□□□□□ -0.68
NPC1L1-201ENST00000289547 SYT11Q9BT88 431 aa10.81□□□□□ -0.68
NPC1L1-201ENST00000289547 EXOSC1Q9Y3B2 195 aaKnown RBP10.81□□□□□ -0.68
NPC1L1-201ENST00000289547 SBF1O95248 1867 aa10.81□□□□□ -0.68
NPC1L1-201ENST00000289547 SLC16A5O15375 505 aa10.81□□□□□ -0.68
NPC1L1-201ENST00000289547 ADAM23O75077 832 aa10.81□□□□□ -0.68
NPC1L1-201ENST00000289547 MPC1LP0DKB6 136 aa10.81□□□□□ -0.68
NPC1L1-201ENST00000289547 IL9P15248 144 aa10.81□□□□□ -0.68
NPC1L1-201ENST00000289547 CD27P26842 260 aa10.81□□□□□ -0.68
NPC1L1-201ENST00000289547 CDKN2CP42773 168 aa10.81□□□□□ -0.68
NPC1L1-201ENST00000289547 MC1RQ01726 317 aa10.81□□□□□ -0.68
NPC1L1-201ENST00000289547 FGL2Q14314 439 aa10.81□□□□□ -0.68
NPC1L1-201ENST00000289547 NHSL2Q5HYW2 709 aa10.81□□□□□ -0.68
NPC1L1-201ENST00000289547 ZFAND4Q86XD8 727 aa10.81□□□□□ -0.68
NPC1L1-201ENST00000289547 ZNF354BQ96LW1 612 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms