RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 TATDN3Q17R31 274 aa12.48□□□□□ -0.41
SLC28A1-201ENST00000286749 ENTPD8Q5MY95 495 aa12.48□□□□□ -0.41
SLC28A1-201ENST00000286749 TRIQKQ629K1 86 aa12.48□□□□□ -0.41
SLC28A1-201ENST00000286749 LILRA6Q6PI73 481 aa12.48□□□□□ -0.41
SLC28A1-201ENST00000286749 Q8N402 240 aa12.48□□□□□ -0.41
SLC28A1-201ENST00000286749 ZNF557Q8N988 423 aaPredicted RBP12.48□□□□□ -0.41
SLC28A1-201ENST00000286749 OR8D4Q8NGM9 314 aa12.48□□□□□ -0.41
SLC28A1-201ENST00000286749 TEX47Q8TBZ9 253 aa12.48□□□□□ -0.41
SLC28A1-201ENST00000286749 RIPOR3Q96MK2 946 aa12.48□□□□□ -0.41
SLC28A1-201ENST00000286749 PRAP1Q96NZ9 151 aa12.48□□□□□ -0.41
SLC28A1-201ENST00000286749 DCLRE1CQ96SD1 692 aaKnown RBP12.48□□□□□ -0.41
SLC28A1-201ENST00000286749 SAP130Q9H0E3 1048 aa12.48□□□□□ -0.41
SLC28A1-201ENST00000286749 ZBP1Q9H171 429 aa12.48□□□□□ -0.41
SLC28A1-201ENST00000286749 GLIPR2Q9H4G4 154 aa12.48□□□□□ -0.41
SLC28A1-201ENST00000286749 RPRD1BQ9NQG5 326 aaKnown RBP12.48□□□□□ -0.41
SLC28A1-201ENST00000286749 GSTK1Q9Y2Q3 226 aa12.48□□□□□ -0.41
SLC28A1-201ENST00000286749 C17orf113A0A1B0GUU1 675 aa12.47□□□□□ -0.41
SLC28A1-201ENST00000286749 FAM25AB3EWG3 89 aa12.47□□□□□ -0.41
SLC28A1-201ENST00000286749 FAM25CB3EWG5 89 aa12.47□□□□□ -0.41
SLC28A1-201ENST00000286749 FAM25GB3EWG6 89 aa12.47□□□□□ -0.41
SLC28A1-201ENST00000286749 RFXAPO00287 272 aa12.47□□□□□ -0.41
SLC28A1-201ENST00000286749 NCR1O76036 304 aa12.47□□□□□ -0.41
SLC28A1-201ENST00000286749 ALX3O95076 343 aa12.47□□□□□ -0.41
SLC28A1-201ENST00000286749 NTN1O95631 604 aa12.47□□□□□ -0.41
SLC28A1-201ENST00000286749 CHRM4P08173 479 aa12.47□□□□□ -0.41
SLC28A1-201ENST00000286749 CLPPQ16740 277 aaPredicted RBP12.47□□□□□ -0.41
SLC28A1-201ENST00000286749 SLC27A4Q6P1M0 643 aa12.47□□□□□ -0.41
SLC28A1-201ENST00000286749 CNKSR3Q6P9H4 555 aa12.47□□□□□ -0.41
SLC28A1-201ENST00000286749 C11orf96Q7Z7L8 435 aa12.47□□□□□ -0.41
SLC28A1-201ENST00000286749 LHFPL3Q86UP9 236 aa12.47□□□□□ -0.41
SLC28A1-201ENST00000286749 YIPF7Q8N8F6 280 aa12.47□□□□□ -0.41
SLC28A1-201ENST00000286749 C19orf18Q8NEA5 215 aa12.47□□□□□ -0.41
SLC28A1-201ENST00000286749 VWCEQ96DN2 955 aa12.47□□□□□ -0.41
SLC28A1-201ENST00000286749 LINC00615Q96LM1 132 aaPredicted RBP12.47□□□□□ -0.41
SLC28A1-201ENST00000286749 PRRC1Q96M27 445 aa12.47□□□□□ -0.41
SLC28A1-201ENST00000286749 B3GAT2Q9NPZ5 323 aa12.47□□□□□ -0.41
SLC28A1-201ENST00000286749 MRPS18AQ9NVS2 196 aaKnown RBP12.47□□□□□ -0.41
SLC28A1-201ENST00000286749 HCFC2Q9Y5Z7 792 aa12.47□□□□□ -0.41
SLC28A1-201ENST00000286749 CLCA3PQ9Y6N3 262 aa12.47□□□□□ -0.41
SLC28A1-201ENST00000286749 PPM1DO15297 605 aa12.47□□□□□ -0.41
SLC28A1-201ENST00000286749 LZTS3O60299 673 aaPredicted RBP12.47□□□□□ -0.41
SLC28A1-201ENST00000286749 PRKRAO75569 313 aaKnown RBP12.47□□□□□ -0.41
SLC28A1-201ENST00000286749 LALBAP00709 142 aa12.47□□□□□ -0.41
SLC28A1-201ENST00000286749 SERPIND1P05546 499 aa12.47□□□□□ -0.41
SLC28A1-201ENST00000286749 CCNYL3P0C7X3 344 aa12.47□□□□□ -0.41
SLC28A1-201ENST00000286749 ALPPL2P10696 532 aa12.47□□□□□ -0.41
SLC28A1-201ENST00000286749 C6P13671 934 aa12.47□□□□□ -0.41
SLC28A1-201ENST00000286749 CPN2P22792 545 aa12.47□□□□□ -0.41
SLC28A1-201ENST00000286749 HLA-DMAP28067 261 aa12.47□□□□□ -0.41
SLC28A1-201ENST00000286749 EFR3AQ14156 821 aa12.47□□□□□ -0.41
SLC28A1-201ENST00000286749 FAM214AQ32MH5 1076 aa12.47□□□□□ -0.41
SLC28A1-201ENST00000286749 MINDY4Q4G0A6 757 aa12.47□□□□□ -0.41
SLC28A1-201ENST00000286749 CLEC12AQ5QGZ9 265 aa12.47□□□□□ -0.41
SLC28A1-201ENST00000286749 UBE3DQ7Z6J8 389 aa12.47□□□□□ -0.41
SLC28A1-201ENST00000286749 DCUN1D3Q8IWE4 304 aa12.47□□□□□ -0.41
SLC28A1-201ENST00000286749 LINC00471Q8N535 108 aa12.47□□□□□ -0.41
SLC28A1-201ENST00000286749 ANKK1Q8NFD2 765 aa12.47□□□□□ -0.41
SLC28A1-201ENST00000286749 HCAR2Q8TDS4 363 aa12.47□□□□□ -0.41
SLC28A1-201ENST00000286749 TFGQ92734 400 aaPredicted RBP12.47□□□□□ -0.41
SLC28A1-201ENST00000286749 ZNF514Q96K75 400 aaPredicted RBP12.47□□□□□ -0.41
SLC28A1-201ENST00000286749 QRFPRQ96P65 431 aa12.47□□□□□ -0.41
SLC28A1-201ENST00000286749 ARHGAP9Q9BRR9 750 aa12.47□□□□□ -0.41
SLC28A1-201ENST00000286749 QRSL1Q9H0R6 528 aaKnown RBP12.47□□□□□ -0.41
SLC28A1-201ENST00000286749 PELI2Q9HAT8 420 aa12.47□□□□□ -0.41
SLC28A1-201ENST00000286749 ACSS1Q9NUB1 689 aaPredicted RBP12.47□□□□□ -0.41
SLC28A1-201ENST00000286749 EXOSC1Q9Y3B2 195 aaKnown RBP12.47□□□□□ -0.41
SLC28A1-201ENST00000286749 ALG5Q9Y673 324 aa12.47□□□□□ -0.41
SLC28A1-201ENST00000286749 NUMA1Q14980 2115 aa12.47□□□□□ -0.41
SLC28A1-201ENST00000286749 GLOD5A6NK44 160 aa12.46□□□□□ -0.41
SLC28A1-201ENST00000286749 NOTOA8MTQ0 251 aa12.46□□□□□ -0.41
SLC28A1-201ENST00000286749 HCN1O60741 890 aa12.46□□□□□ -0.41
SLC28A1-201ENST00000286749 CPNE3O75131 537 aaKnown RBP12.46□□□□□ -0.41
SLC28A1-201ENST00000286749 MOSPD3O75425 235 aa12.46□□□□□ -0.41
SLC28A1-201ENST00000286749 UBXN7O94888 489 aa12.46□□□□□ -0.41
SLC28A1-201ENST00000286749 GSTM3P21266 225 aa12.46□□□□□ -0.41
SLC28A1-201ENST00000286749 FGF9P31371 208 aaPredicted RBP12.46□□□□□ -0.41
SLC28A1-201ENST00000286749 CCR8P51685 355 aa12.46□□□□□ -0.41
SLC28A1-201ENST00000286749 MLLT1Q03111 559 aaPredicted RBP12.46□□□□□ -0.41
SLC28A1-201ENST00000286749 FUT5Q11128 374 aa12.46□□□□□ -0.41
SLC28A1-201ENST00000286749 IL18Q14116 193 aa12.46□□□□□ -0.41
SLC28A1-201ENST00000286749 DUSP6Q16828 381 aa12.46□□□□□ -0.41
SLC28A1-201ENST00000286749 SYCE2Q6PIF2 218 aa12.46□□□□□ -0.41
SLC28A1-201ENST00000286749 JPH3Q8WXH2 748 aaPredicted RBP12.46□□□□□ -0.41
SLC28A1-201ENST00000286749 ARRDC3Q96B67 414 aa12.46□□□□□ -0.41
SLC28A1-201ENST00000286749 RGMAQ96B86 450 aa12.46□□□□□ -0.41
SLC28A1-201ENST00000286749 AMDHD1Q96NU7 426 aa12.46□□□□□ -0.41
SLC28A1-201ENST00000286749 TMED9Q9BVK6 235 aa12.46□□□□□ -0.41
SLC28A1-201ENST00000286749 PPP1R3EQ9H7J1 279 aa12.46□□□□□ -0.41
SLC28A1-201ENST00000286749 TBC1D17Q9HA65 648 aa12.46□□□□□ -0.41
SLC28A1-201ENST00000286749 ISYNA1Q9NPH2 558 aa12.46□□□□□ -0.41
SLC28A1-201ENST00000286749 ACOXLQ9NUZ1 547 aa12.46□□□□□ -0.41
SLC28A1-201ENST00000286749 CNIH4Q9P003 139 aa12.46□□□□□ -0.41
SLC28A1-201ENST00000286749 CLCA2Q9UQC9 943 aa12.46□□□□□ -0.41
SLC28A1-201ENST00000286749 DNMT3AQ9Y6K1 912 aaPredicted RBP12.46□□□□□ -0.41
SLC28A1-201ENST00000286749 NOTCH4Q99466 2003 aa12.46□□□□□ -0.41
SLC28A1-201ENST00000286749 A0A087WUU8 490 aa12.46□□□□□ -0.42
SLC28A1-201ENST00000286749 IRGMA1A4Y4 181 aa12.46□□□□□ -0.42
SLC28A1-201ENST00000286749 SNTNA6NMZ2 147 aa12.46□□□□□ -0.42
SLC28A1-201ENST00000286749 OR1F1O43749 312 aa12.46□□□□□ -0.42
SLC28A1-201ENST00000286749 FGF18O76093 207 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms