RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 PTX3P26022 381 aaPredicted RBP8.15□□□□□ -1.1
TPM3-201ENST00000271850 GPC1P35052 558 aa8.15□□□□□ -1.1
TPM3-201ENST00000271850 PAFAH1B1P43034 410 aa8.15□□□□□ -1.1
TPM3-201ENST00000271850 ILF2Q12905 390 aaKnown RBP8.15□□□□□ -1.1
TPM3-201ENST00000271850 BIKQ13323 160 aa8.15□□□□□ -1.1
TPM3-201ENST00000271850 EXOSC7Q15024 291 aaKnown RBP8.15□□□□□ -1.1
TPM3-201ENST00000271850 ACAP2Q15057 778 aa8.15□□□□□ -1.1
TPM3-201ENST00000271850 LTB4RQ15722 352 aa8.15□□□□□ -1.1
TPM3-201ENST00000271850 PRICKLE4Q2TBC4 344 aa8.15□□□□□ -1.1
TPM3-201ENST00000271850 TIGD3Q6B0B8 471 aa8.15□□□□□ -1.1
TPM3-201ENST00000271850 OR52E8Q6IFG1 317 aa8.15□□□□□ -1.1
TPM3-201ENST00000271850 YRDCQ86U90 279 aaKnown RBP8.15□□□□□ -1.1
TPM3-201ENST00000271850 CCDC25Q86WR0 208 aa8.15□□□□□ -1.1
TPM3-201ENST00000271850 NUDT13Q86X67 352 aa8.15□□□□□ -1.1
TPM3-201ENST00000271850 GALNT12Q8IXK2 581 aa8.15□□□□□ -1.1
TPM3-201ENST00000271850 C17orf53Q8N3J3 647 aaPredicted RBP8.15□□□□□ -1.1
TPM3-201ENST00000271850 LIX1Q8N485 282 aa8.15□□□□□ -1.1
TPM3-201ENST00000271850 WDSUB1Q8N9V3 476 aa8.15□□□□□ -1.1
TPM3-201ENST00000271850 FAM83FQ8NEG4 500 aaPredicted RBP8.15□□□□□ -1.1
TPM3-201ENST00000271850 MYRIPQ8NFW9 859 aa8.15□□□□□ -1.1
TPM3-201ENST00000271850 FAM222BQ8WU58 562 aa8.15□□□□□ -1.1
TPM3-201ENST00000271850 RNF138Q8WVD3 245 aa8.15□□□□□ -1.1
TPM3-201ENST00000271850 ISL2Q96A47 359 aa8.15□□□□□ -1.1
TPM3-201ENST00000271850 CTHRC1Q96CG8 243 aa8.15□□□□□ -1.1
TPM3-201ENST00000271850 MRRFQ96E11 262 aaKnown RBP8.15□□□□□ -1.1
TPM3-201ENST00000271850 RMND5BQ96G75 393 aaPredicted RBP8.15□□□□□ -1.1
TPM3-201ENST00000271850 TRIB1Q96RU8 372 aa8.15□□□□□ -1.1
TPM3-201ENST00000271850 TUBA1CQ9BQE3 449 aa8.15□□□□□ -1.1
TPM3-201ENST00000271850 PELOQ9BRX2 385 aaKnown RBP8.15□□□□□ -1.1
TPM3-201ENST00000271850 ITPAQ9BY32 194 aa8.15□□□□□ -1.1
TPM3-201ENST00000271850 NOL11Q9H8H0 719 aaKnown RBP8.15□□□□□ -1.1
TPM3-201ENST00000271850 ANKRA2Q9H9E1 313 aa8.15□□□□□ -1.1
TPM3-201ENST00000271850 GRPEL1Q9HAV7 217 aa8.15□□□□□ -1.1
TPM3-201ENST00000271850 SLC24A3Q9HC58 644 aa8.15□□□□□ -1.1
TPM3-201ENST00000271850 ZDHHC18Q9NUE0 388 aa8.15□□□□□ -1.1
TPM3-201ENST00000271850 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.15□□□□□ -1.1
TPM3-201ENST00000271850 MAT2BQ9NZL9 334 aa8.15□□□□□ -1.1
TPM3-201ENST00000271850 EHD3Q9NZN3 535 aa8.15□□□□□ -1.1
TPM3-201ENST00000271850 TXNDC16Q9P2K2 825 aa8.15□□□□□ -1.1
TPM3-201ENST00000271850 ZNF629Q9UEG4 869 aaPredicted RBP8.15□□□□□ -1.1
TPM3-201ENST00000271850 PCTPQ9UKL6 214 aa8.15□□□□□ -1.1
TPM3-201ENST00000271850 ACOT9Q9Y305 439 aa8.15□□□□□ -1.1
TPM3-201ENST00000271850 A0A087X1B8 175 aa8.14□□□□□ -1.11
TPM3-201ENST00000271850 A0A096LPK6 155 aa8.14□□□□□ -1.11
TPM3-201ENST00000271850 FAM47E-STBD1D6RA91 191 aa8.14□□□□□ -1.11
TPM3-201ENST00000271850 DVL2O14641 736 aa8.14□□□□□ -1.11
TPM3-201ENST00000271850 PPM1BO75688 479 aa8.14□□□□□ -1.11
TPM3-201ENST00000271850 TRAPPC6AO75865 159 aa8.14□□□□□ -1.11
TPM3-201ENST00000271850 EPXP11678 715 aa8.14□□□□□ -1.11
TPM3-201ENST00000271850 GFAPP14136 432 aa8.14□□□□□ -1.11
TPM3-201ENST00000271850 CD53P19397 219 aa8.14□□□□□ -1.11
TPM3-201ENST00000271850 CNTFP26441 200 aa8.14□□□□□ -1.11
TPM3-201ENST00000271850 HOXC12P31275 282 aa8.14□□□□□ -1.11
TPM3-201ENST00000271850 TLX1P31314 330 aaPredicted RBP8.14□□□□□ -1.11
TPM3-201ENST00000271850 STX2P32856 288 aa8.14□□□□□ -1.11
TPM3-201ENST00000271850 EMDP50402 254 aa8.14□□□□□ -1.11
TPM3-201ENST00000271850 XKP51811 444 aa8.14□□□□□ -1.11
TPM3-201ENST00000271850 GFRA1P56159 465 aa8.14□□□□□ -1.11
TPM3-201ENST00000271850 TBL3Q12788 808 aaKnown RBP8.14□□□□□ -1.11
TPM3-201ENST00000271850 CALCOCO2Q13137 446 aa8.14□□□□□ -1.11
TPM3-201ENST00000271850 NAB1Q13506 487 aa8.14□□□□□ -1.11
TPM3-201ENST00000271850 POU4F3Q15319 338 aa8.14□□□□□ -1.11
TPM3-201ENST00000271850 DEFB113Q30KQ7 82 aa8.14□□□□□ -1.11
TPM3-201ENST00000271850 TRMT12Q53H54 448 aaKnown RBP8.14□□□□□ -1.11
TPM3-201ENST00000271850 TCHHL1Q5QJ38 904 aaPredicted RBP8.14□□□□□ -1.11
TPM3-201ENST00000271850 TBCELQ5QJ74 424 aa8.14□□□□□ -1.11
TPM3-201ENST00000271850 TMEM198Q66K66 360 aa8.14□□□□□ -1.11
TPM3-201ENST00000271850 LETMD1Q6P1Q0 360 aa8.14□□□□□ -1.11
TPM3-201ENST00000271850 TMEM81Q6P7N7 255 aa8.14□□□□□ -1.11
TPM3-201ENST00000271850 CYP20A1Q6UW02 462 aa8.14□□□□□ -1.11
TPM3-201ENST00000271850 MAATS1Q7Z4T9 603 aa8.14□□□□□ -1.11
TPM3-201ENST00000271850 CXorf67Q86X51 503 aaPredicted RBP8.14□□□□□ -1.11
TPM3-201ENST00000271850 TAGAPQ8N103 731 aa8.14□□□□□ -1.11
TPM3-201ENST00000271850 METTL4Q8N3J2 472 aa8.14□□□□□ -1.11
TPM3-201ENST00000271850 PTGR2Q8N8N7 351 aaPredicted RBP8.14□□□□□ -1.11
TPM3-201ENST00000271850 C17orf47Q8NEP4 570 aa8.14□□□□□ -1.11
TPM3-201ENST00000271850 ADCY4Q8NFM4 1077 aa8.14□□□□□ -1.11
TPM3-201ENST00000271850 ABTB1Q969K4 478 aaPredicted RBP8.14□□□□□ -1.11
TPM3-201ENST00000271850 PHF21BQ96EK2 531 aa8.14□□□□□ -1.11
TPM3-201ENST00000271850 CNRIP1Q96F85 164 aaPredicted RBP8.14□□□□□ -1.11
TPM3-201ENST00000271850 ZNF681Q96N22 645 aa8.14□□□□□ -1.11
TPM3-201ENST00000271850 SECISBP2Q96T21 854 aaKnown RBP8.14□□□□□ -1.11
TPM3-201ENST00000271850 NTMT1Q9BV86 223 aa8.14□□□□□ -1.11
TPM3-201ENST00000271850 KRTAP9-2Q9BYQ4 174 aa8.14□□□□□ -1.11
TPM3-201ENST00000271850 CPSF2Q9P2I0 782 aaKnown RBP8.14□□□□□ -1.11
TPM3-201ENST00000271850 CLCF1Q9UBD9 225 aa8.14□□□□□ -1.11
TPM3-201ENST00000271850 HEY2Q9UBP5 337 aa8.14□□□□□ -1.11
TPM3-201ENST00000271850 RNF14Q9UBS8 474 aa8.14□□□□□ -1.11
TPM3-201ENST00000271850 FETUBQ9UGM5 382 aa8.14□□□□□ -1.11
TPM3-201ENST00000271850 FBXL2Q9UKC9 423 aa8.14□□□□□ -1.11
TPM3-201ENST00000271850 CAMK2AQ9UQM7 478 aa8.14□□□□□ -1.11
TPM3-201ENST00000271850 PLLPQ9Y342 182 aa8.14□□□□□ -1.11
TPM3-201ENST00000271850 PCDHA9Q9Y5H5 950 aa8.14□□□□□ -1.11
TPM3-201ENST00000271850 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.13□□□□□ -1.11
TPM3-201ENST00000271850 SYCE1LA8MT33 242 aa8.13□□□□□ -1.11
TPM3-201ENST00000271850 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.13□□□□□ -1.11
TPM3-201ENST00000271850 TP53I11O14683 189 aa8.13□□□□□ -1.11
TPM3-201ENST00000271850 DYRK3O43781 588 aa8.13□□□□□ -1.11
TPM3-201ENST00000271850 ICOSLGO75144 302 aa8.13□□□□□ -1.11
TPM3-201ENST00000271850 TNFSF13O75888 250 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms