RNA–Protein interactions for RNA: ENST00000269138.9

SS18-202, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-202ENST00000269138 DDX18Q9NVP1 670 aaKnown RBP11.8□□□□□ -0.52
SS18-202ENST00000269138 FAM208BQ5VWN6 2430 aa11.79□□□□□ -0.52
SS18-202ENST00000269138 PRSS51A0A1B0GVH4 220 aa11.79□□□□□ -0.52
SS18-202ENST00000269138 BCAS2O75934 225 aaPredicted RBP11.79□□□□□ -0.52
SS18-202ENST00000269138 NEURL1O76050 574 aa11.79□□□□□ -0.52
SS18-202ENST00000269138 SLITRK5O94991 958 aa11.79□□□□□ -0.52
SS18-202ENST00000269138 PSMG1O95456 288 aa11.79□□□□□ -0.52
SS18-202ENST00000269138 CPSF4O95639 269 aaKnown RBP11.79□□□□□ -0.52
SS18-202ENST00000269138 NCF2P19878 526 aaPredicted RBP11.79□□□□□ -0.52
SS18-202ENST00000269138 ARFIP2P53365 341 aa11.79□□□□□ -0.52
SS18-202ENST00000269138 PRKAG1P54619 331 aa11.79□□□□□ -0.52
SS18-202ENST00000269138 CORO7P57737 925 aa11.79□□□□□ -0.52
SS18-202ENST00000269138 GNGT1P63211 74 aa11.79□□□□□ -0.52
SS18-202ENST00000269138 HBA1P69905 142 aa11.79□□□□□ -0.52
SS18-202ENST00000269138 KLRB1Q12918 225 aa11.79□□□□□ -0.52
SS18-202ENST00000269138 OR1C1Q15619 314 aa11.79□□□□□ -0.52
SS18-202ENST00000269138 IL20RBQ6UXL0 311 aa11.79□□□□□ -0.52
SS18-202ENST00000269138 NPSR1Q6W5P4 371 aa11.79□□□□□ -0.52
SS18-202ENST00000269138 HPS6Q86YV9 775 aa11.79□□□□□ -0.52
SS18-202ENST00000269138 FUNDC1Q8IVP5 155 aa11.79□□□□□ -0.52
SS18-202ENST00000269138 PRR22Q8IZ63 422 aa11.79□□□□□ -0.52
SS18-202ENST00000269138 CLEC4FQ8N1N0 589 aa11.79□□□□□ -0.52
SS18-202ENST00000269138 Q8NA96 180 aa11.79□□□□□ -0.52
SS18-202ENST00000269138 MDS2Q8NDY4 140 aa11.79□□□□□ -0.52
SS18-202ENST00000269138 NUP43Q8NFH3 380 aa11.79□□□□□ -0.52
SS18-202ENST00000269138 PSMA8Q8TAA3 256 aa11.79□□□□□ -0.52
SS18-202ENST00000269138 ASB15Q8WXK1 588 aa11.79□□□□□ -0.52
SS18-202ENST00000269138 TP53INP1Q96A56 240 aa11.79□□□□□ -0.52
SS18-202ENST00000269138 FAM120BQ96EK7 910 aaKnown RBP11.79□□□□□ -0.52
SS18-202ENST00000269138 VSTM2LQ96N03 204 aa11.79□□□□□ -0.52
SS18-202ENST00000269138 HES7Q9BYE0 225 aa11.79□□□□□ -0.52
SS18-202ENST00000269138 ZNF385DQ9H6B1 395 aa11.79□□□□□ -0.52
SS18-202ENST00000269138 EQTNQ9NQ60 294 aa11.79□□□□□ -0.52
SS18-202ENST00000269138 NTMQ9P121 344 aa11.79□□□□□ -0.52
SS18-202ENST00000269138 LRFN1Q9P244 771 aa11.79□□□□□ -0.52
SS18-202ENST00000269138 PRODH2Q9UF12 536 aa11.79□□□□□ -0.52
SS18-202ENST00000269138 CFL2Q9Y281 166 aa11.79□□□□□ -0.52
SS18-202ENST00000269138 B3GNT3Q9Y2A9 372 aa11.79□□□□□ -0.52
SS18-202ENST00000269138 SNX8Q9Y5X2 465 aa11.79□□□□□ -0.52
SS18-202ENST00000269138 CPAMD8Q8IZJ3 1885 aa11.79□□□□□ -0.52
SS18-202ENST00000269138 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.78□□□□□ -0.52
SS18-202ENST00000269138 RNASET2O00584 256 aaKnown RBP11.78□□□□□ -0.52
SS18-202ENST00000269138 EMC8O43402 210 aa11.78□□□□□ -0.52
SS18-202ENST00000269138 PGRP06401 933 aa11.78□□□□□ -0.52
SS18-202ENST00000269138 CT45A8P0DMV1 189 aa11.78□□□□□ -0.52
SS18-202ENST00000269138 CT45A9P0DMV2 189 aa11.78□□□□□ -0.52
SS18-202ENST00000269138 DRD4P21917 467 aa11.78□□□□□ -0.52
SS18-202ENST00000269138 PPICP45877 212 aa11.78□□□□□ -0.52
SS18-202ENST00000269138 CCT3P49368 545 aaKnown RBP11.78□□□□□ -0.52
SS18-202ENST00000269138 MRPL19P49406 292 aaKnown RBP11.78□□□□□ -0.52
SS18-202ENST00000269138 CYB561P49447 251 aa11.78□□□□□ -0.52
SS18-202ENST00000269138 POLR2JP52435 117 aaKnown RBP11.78□□□□□ -0.52
SS18-202ENST00000269138 STX1BP61266 288 aa11.78□□□□□ -0.52
SS18-202ENST00000269138 ZNF155Q12901 538 aaPredicted RBP11.78□□□□□ -0.52
SS18-202ENST00000269138 DPY19L1Q2PZI1 675 aa11.78□□□□□ -0.52
SS18-202ENST00000269138 CT45A2Q5DJT8 189 aa11.78□□□□□ -0.52
SS18-202ENST00000269138 ANXA8L1Q5VT79 327 aa11.78□□□□□ -0.52
SS18-202ENST00000269138 SZRD1Q7Z422 152 aa11.78□□□□□ -0.52
SS18-202ENST00000269138 ZNF843Q8N446 348 aa11.78□□□□□ -0.52
SS18-202ENST00000269138 GLB1L3Q8NCI6 653 aaPredicted RBP11.78□□□□□ -0.52
SS18-202ENST00000269138 OR4A15Q8NGL6 344 aa11.78□□□□□ -0.52
SS18-202ENST00000269138 C10orf82Q8WW14 230 aa11.78□□□□□ -0.52
SS18-202ENST00000269138 VPS33AQ96AX1 596 aa11.78□□□□□ -0.52
SS18-202ENST00000269138 GIMAP5Q96F15 307 aa11.78□□□□□ -0.52
SS18-202ENST00000269138 C16orf58Q96GQ5 468 aa11.78□□□□□ -0.52
SS18-202ENST00000269138 LCORQ96JN0 433 aaPredicted RBP11.78□□□□□ -0.52
SS18-202ENST00000269138 OR52E6Q96RD3 313 aa11.78□□□□□ -0.52
SS18-202ENST00000269138 YIPF4Q9BSR8 244 aa11.78□□□□□ -0.52
SS18-202ENST00000269138 INPP5KQ9BT40 448 aa11.78□□□□□ -0.52
SS18-202ENST00000269138 FAM107BQ9H098 131 aa11.78□□□□□ -0.52
SS18-202ENST00000269138 RABEP2Q9H5N1 569 aa11.78□□□□□ -0.52
SS18-202ENST00000269138 TRIM45Q9H8W5 580 aaPredicted RBP11.78□□□□□ -0.52
SS18-202ENST00000269138 C3orf14Q9HBI5 128 aa11.78□□□□□ -0.52
SS18-202ENST00000269138 KLHL1Q9NR64 748 aa11.78□□□□□ -0.52
SS18-202ENST00000269138 TAS2R9Q9NYW1 312 aa11.78□□□□□ -0.52
SS18-202ENST00000269138 KLHL14Q9P2G3 628 aa11.78□□□□□ -0.52
SS18-202ENST00000269138 GPR55Q9Y2T6 319 aaPredicted RBP11.78□□□□□ -0.52
SS18-202ENST00000269138 FAM234BA2RU67 622 aa11.77□□□□□ -0.52
SS18-202ENST00000269138 A8MVJ9 347 aa11.77□□□□□ -0.52
SS18-202ENST00000269138 COQ9O75208 318 aa11.77□□□□□ -0.52
SS18-202ENST00000269138 ERN1O75460 977 aaKnown RBP11.77□□□□□ -0.52
SS18-202ENST00000269138 C1QCP02747 245 aa11.77□□□□□ -0.52
SS18-202ENST00000269138 IFI6P09912 130 aa11.77□□□□□ -0.52
SS18-202ENST00000269138 DRD5P21918 477 aa11.77□□□□□ -0.52
SS18-202ENST00000269138 CASRP41180 1078 aa11.77□□□□□ -0.52
SS18-202ENST00000269138 CDKN2CP42773 168 aa11.77□□□□□ -0.52
SS18-202ENST00000269138 ATP4BP51164 291 aa11.77□□□□□ -0.52
SS18-202ENST00000269138 SQLEQ14534 574 aa11.77□□□□□ -0.52
SS18-202ENST00000269138 ZNF169Q14929 603 aaPredicted RBP11.77□□□□□ -0.52
SS18-202ENST00000269138 TLR1Q15399 786 aa11.77□□□□□ -0.52
SS18-202ENST00000269138 ZNF791Q3KP31 576 aaPredicted RBP11.77□□□□□ -0.52
SS18-202ENST00000269138 SPDYE7PQ495Y7 208 aa11.77□□□□□ -0.52
SS18-202ENST00000269138 AGKQ53H12 422 aa11.77□□□□□ -0.52
SS18-202ENST00000269138 DESI1Q6ICB0 168 aa11.77□□□□□ -0.52
SS18-202ENST00000269138 OPN5Q6U736 354 aa11.77□□□□□ -0.52
SS18-202ENST00000269138 MDGA2Q7Z553 956 aa11.77□□□□□ -0.52
SS18-202ENST00000269138 SLC44A2Q8IWA5 706 aaPredicted RBP11.77□□□□□ -0.52
SS18-202ENST00000269138 CYP4Z2PQ8N1L4 340 aa11.77□□□□□ -0.52
SS18-202ENST00000269138 SLC15A4Q8N697 577 aa11.77□□□□□ -0.52
SS18-202ENST00000269138 C17orf47Q8NEP4 570 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms