RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 IGHA2P01877 340 aa8.3□□□□□ -1.08
VAPB-201ENST00000265619 S100A6P06703 90 aa8.3□□□□□ -1.08
VAPB-201ENST00000265619 DRD2P14416 443 aa8.3□□□□□ -1.08
VAPB-201ENST00000265619 SYN1P17600 705 aa8.3□□□□□ -1.08
VAPB-201ENST00000265619 LCN1P31025 176 aa8.3□□□□□ -1.08
VAPB-201ENST00000265619 MMP12P39900 470 aa8.3□□□□□ -1.08
VAPB-201ENST00000265619 SLC10A7Q0GE19 358 aa8.3□□□□□ -1.08
VAPB-201ENST00000265619 DUOXA1Q1HG43 343 aa8.3□□□□□ -1.08
VAPB-201ENST00000265619 SWI5Q1ZZU3 235 aa8.3□□□□□ -1.08
VAPB-201ENST00000265619 SLC36A2Q495M3 483 aa8.3□□□□□ -1.08
VAPB-201ENST00000265619 HECTD3Q5T447 861 aa8.3□□□□□ -1.08
VAPB-201ENST00000265619 ZER1Q7Z7L7 766 aa8.3□□□□□ -1.08
VAPB-201ENST00000265619 GPSM1Q86YR5 675 aa8.3□□□□□ -1.08
VAPB-201ENST00000265619 PIGKQ92643 395 aa8.3□□□□□ -1.08
VAPB-201ENST00000265619 LINGO1Q96FE5 620 aa8.3□□□□□ -1.08
VAPB-201ENST00000265619 HHIPL1Q96JK4 782 aa8.3□□□□□ -1.08
VAPB-201ENST00000265619 ABHD1Q96SE0 405 aa8.3□□□□□ -1.08
VAPB-201ENST00000265619 GAS2L1Q99501 681 aaPredicted RBP8.3□□□□□ -1.08
VAPB-201ENST00000265619 NSUN3Q9H649 340 aaKnown RBP8.3□□□□□ -1.08
VAPB-201ENST00000265619 WDCPQ9H6R7 721 aa8.3□□□□□ -1.08
VAPB-201ENST00000265619 CNOT2Q9NZN8 540 aaKnown RBP8.3□□□□□ -1.08
VAPB-201ENST00000265619 DHCR7Q9UBM7 475 aaKnown RBP8.3□□□□□ -1.08
VAPB-201ENST00000265619 SUV39H1O43463 412 aa8.3□□□□□ -1.08
VAPB-201ENST00000265619 LY86O95711 162 aa8.3□□□□□ -1.08
VAPB-201ENST00000265619 EIF4EP06730 217 aaKnown RBP8.3□□□□□ -1.08
VAPB-201ENST00000265619 CD3GP09693 182 aa8.3□□□□□ -1.08
VAPB-201ENST00000265619 H2AFB1P0C5Y9 115 aa8.3□□□□□ -1.08
VAPB-201ENST00000265619 H2AFB2P0C5Z0 115 aa8.3□□□□□ -1.08
VAPB-201ENST00000265619 OR12D1P0DN82 309 aa8.3□□□□□ -1.08
VAPB-201ENST00000265619 WARSP23381 471 aaKnown RBP8.3□□□□□ -1.08
VAPB-201ENST00000265619 SCAPQ12770 1279 aa8.3□□□□□ -1.08
VAPB-201ENST00000265619 GTF2H2Q13888 395 aa8.3□□□□□ -1.08
VAPB-201ENST00000265619 INTS6LQ5JSJ4 861 aaKnown RBP8.3□□□□□ -1.08
VAPB-201ENST00000265619 GTF2H2CQ6P1K8 395 aa8.3□□□□□ -1.08
VAPB-201ENST00000265619 NHLRC1Q6VVB1 395 aa8.3□□□□□ -1.08
VAPB-201ENST00000265619 DBX2Q6ZNG2 339 aa8.3□□□□□ -1.08
VAPB-201ENST00000265619 GDPGP1Q6ZNW5 385 aa8.3□□□□□ -1.08
VAPB-201ENST00000265619 SLC30A8Q8IWU4 369 aa8.3□□□□□ -1.08
VAPB-201ENST00000265619 CRYBG2Q8N1P7 616 aa8.3□□□□□ -1.08
VAPB-201ENST00000265619 HMGB4Q8WW32 186 aa8.3□□□□□ -1.08
VAPB-201ENST00000265619 ZNF275Q9NSD4 429 aaPredicted RBP8.3□□□□□ -1.08
VAPB-201ENST00000265619 ABCC13Q9NSE7 274 aa8.3□□□□□ -1.08
VAPB-201ENST00000265619 CLN6Q9NWW5 311 aa8.3□□□□□ -1.08
VAPB-201ENST00000265619 NTMQ9P121 344 aa8.3□□□□□ -1.08
VAPB-201ENST00000265619 ZNF624Q9P2J8 865 aaPredicted RBP8.3□□□□□ -1.08
VAPB-201ENST00000265619 MIOXQ9UGB7 285 aa8.3□□□□□ -1.08
VAPB-201ENST00000265619 PRUNE2Q8WUY3 3088 aa8.3□□□□□ -1.08
VAPB-201ENST00000265619 A6NCN8 305 aa8.3□□□□□ -1.08
VAPB-201ENST00000265619 TMEM200CA6NKL6 621 aa8.3□□□□□ -1.08
VAPB-201ENST00000265619 ZAR1LA6NP61 321 aa8.3□□□□□ -1.08
VAPB-201ENST00000265619 MPTX1A8MV57 137 aa8.3□□□□□ -1.08
VAPB-201ENST00000265619 CPSF4O95639 269 aaKnown RBP8.3□□□□□ -1.08
VAPB-201ENST00000265619 MT-ND4P03905 459 aa8.3□□□□□ -1.08
VAPB-201ENST00000265619 ATXN1LP0C7T5 689 aaKnown RBP8.3□□□□□ -1.08
VAPB-201ENST00000265619 CSF2RAP15509 400 aa8.3□□□□□ -1.08
VAPB-201ENST00000265619 S100A3P33764 101 aa8.3□□□□□ -1.08
VAPB-201ENST00000265619 SLC11A1P49279 550 aa8.3□□□□□ -1.08
VAPB-201ENST00000265619 AKR1C2P52895 323 aa8.3□□□□□ -1.08
VAPB-201ENST00000265619 ATP12AP54707 1039 aa8.3□□□□□ -1.08
VAPB-201ENST00000265619 PRR5P85299 388 aa8.3□□□□□ -1.08
VAPB-201ENST00000265619 AKR1C1Q04828 323 aa8.3□□□□□ -1.08
VAPB-201ENST00000265619 MLLT11Q13015 90 aaPredicted RBP8.3□□□□□ -1.08
VAPB-201ENST00000265619 CCINQ13939 588 aa8.3□□□□□ -1.08
VAPB-201ENST00000265619 HLXQ14774 488 aaPredicted RBP8.3□□□□□ -1.08
VAPB-201ENST00000265619 ZNF621Q6ZSS3 439 aa8.3□□□□□ -1.08
VAPB-201ENST00000265619 CIR1Q86X95 450 aaPredicted RBP8.3□□□□□ -1.08
VAPB-201ENST00000265619 AQP11Q8NBQ7 271 aa8.3□□□□□ -1.08
VAPB-201ENST00000265619 UXS1Q8NBZ7 420 aa8.3□□□□□ -1.08
VAPB-201ENST00000265619 BPIFCQ8NFQ6 507 aa8.3□□□□□ -1.08
VAPB-201ENST00000265619 COPS8Q99627 209 aa8.3□□□□□ -1.08
VAPB-201ENST00000265619 TSSK6Q9BXA6 273 aa8.3□□□□□ -1.08
VAPB-201ENST00000265619 ENKD1Q9H0I2 346 aa8.3□□□□□ -1.08
VAPB-201ENST00000265619 NT5DC2Q9H857 520 aa8.3□□□□□ -1.08
VAPB-201ENST00000265619 PIPOXQ9P0Z9 390 aa8.3□□□□□ -1.08
VAPB-201ENST00000265619 SCP2D1Q9UJQ7 156 aa8.3□□□□□ -1.08
VAPB-201ENST00000265619 CLEC4AQ9UMR7 237 aa8.3□□□□□ -1.08
VAPB-201ENST00000265619 POFUT2Q9Y2G5 429 aa8.3□□□□□ -1.08
VAPB-201ENST00000265619 MYO10Q9HD67 2058 aa8.29□□□□□ -1.08
VAPB-201ENST00000265619 CHD7Q9P2D1 2997 aa8.29□□□□□ -1.08
VAPB-201ENST00000265619 A0A1W2PQH9 124 aa8.29□□□□□ -1.08
VAPB-201ENST00000265619 RTCAO00442 366 aaKnown RBP8.29□□□□□ -1.08
VAPB-201ENST00000265619 ZNF593O00488 134 aaPredicted RBP8.29□□□□□ -1.08
VAPB-201ENST00000265619 PEX11BO96011 259 aa8.29□□□□□ -1.08
VAPB-201ENST00000265619 DHFRP00374 187 aa8.29□□□□□ -1.08
VAPB-201ENST00000265619 STC1P52823 247 aa8.29□□□□□ -1.08
VAPB-201ENST00000265619 LBX1P52954 281 aa8.29□□□□□ -1.08
VAPB-201ENST00000265619 C10orf120Q5SQS8 335 aa8.29□□□□□ -1.08
VAPB-201ENST00000265619 BICRALQ6AI39 1079 aa8.29□□□□□ -1.08
VAPB-201ENST00000265619 MBOAT1Q6ZNC8 495 aa8.29□□□□□ -1.08
VAPB-201ENST00000265619 LDLRAD3Q86YD5 345 aa8.29□□□□□ -1.08
VAPB-201ENST00000265619 PXYLP1Q8TE99 480 aa8.29□□□□□ -1.08
VAPB-201ENST00000265619 NTAN1Q96AB6 310 aa8.29□□□□□ -1.08
VAPB-201ENST00000265619 WDR77Q9BQA1 342 aaPredicted RBP8.29□□□□□ -1.08
VAPB-201ENST00000265619 TMED9Q9BVK6 235 aa8.29□□□□□ -1.08
VAPB-201ENST00000265619 MND1Q9BWT6 205 aa8.29□□□□□ -1.08
VAPB-201ENST00000265619 TMEM121BQ9BXQ6 578 aaPredicted RBP8.29□□□□□ -1.08
VAPB-201ENST00000265619 EBPLQ9BY08 206 aa8.29□□□□□ -1.08
VAPB-201ENST00000265619 FZD3Q9NPG1 666 aa8.29□□□□□ -1.08
VAPB-201ENST00000265619 ENAMQ9NRM1 1142 aa8.29□□□□□ -1.08
VAPB-201ENST00000265619 MRPL15Q9P015 296 aaKnown RBP8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms