RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 CLCA3PQ9Y6N3 262 aa9.07□□□□□ -0.96
SNRNP40-201ENST00000263694 PCSK5Q92824 1860 aa9.06□□□□□ -0.96
SNRNP40-201ENST00000263694 A0A087WV62 115 aa9.06□□□□□ -0.96
SNRNP40-201ENST00000263694 PRAMEF27A3QJZ7 478 aa9.06□□□□□ -0.96
SNRNP40-201ENST00000263694 CFAP73A6NFT4 308 aa9.06□□□□□ -0.96
SNRNP40-201ENST00000263694 STMND1H3BQB6 276 aa9.06□□□□□ -0.96
SNRNP40-201ENST00000263694 HMGN4O00479 90 aa9.06□□□□□ -0.96
SNRNP40-201ENST00000263694 TERTO14746 1132 aaKnown RBP9.06□□□□□ -0.96
SNRNP40-201ENST00000263694 ACP2P11117 423 aa9.06□□□□□ -0.96
SNRNP40-201ENST00000263694 PPIBP23284 216 aaKnown RBP9.06□□□□□ -0.96
SNRNP40-201ENST00000263694 FOLR3P41439 243 aa9.06□□□□□ -0.96
SNRNP40-201ENST00000263694 EMDP50402 254 aa9.06□□□□□ -0.96
SNRNP40-201ENST00000263694 DMTNQ08495 405 aa9.06□□□□□ -0.96
SNRNP40-201ENST00000263694 FUT7Q11130 342 aa9.06□□□□□ -0.96
SNRNP40-201ENST00000263694 SRSF6Q13247 344 aaKnown RBP9.06□□□□□ -0.96
SNRNP40-201ENST00000263694 ELAVL1Q15717 326 aaKnown RBP9.06□□□□□ -0.96
SNRNP40-201ENST00000263694 C6orf163Q5TEZ5 329 aa9.06□□□□□ -0.96
SNRNP40-201ENST00000263694 MFSD12Q6NUT3 480 aa9.06□□□□□ -0.96
SNRNP40-201ENST00000263694 TMEM205Q6UW68 189 aa9.06□□□□□ -0.96
SNRNP40-201ENST00000263694 CPEB2Q7Z5Q1 589 aaKnown RBP9.06□□□□□ -0.96
SNRNP40-201ENST00000263694 GALNT10Q86SR1 603 aa9.06□□□□□ -0.96
SNRNP40-201ENST00000263694 MICU2Q8IYU8 434 aa9.06□□□□□ -0.96
SNRNP40-201ENST00000263694 ARHGAP24Q8N264 748 aa9.06□□□□□ -0.96
SNRNP40-201ENST00000263694 OR2T12Q8NG77 320 aa9.06□□□□□ -0.96
SNRNP40-201ENST00000263694 ZNF721Q8TF20 911 aa9.06□□□□□ -0.96
SNRNP40-201ENST00000263694 SLC9A6Q92581 669 aa9.06□□□□□ -0.96
SNRNP40-201ENST00000263694 SLC35A4Q96G79 324 aa9.06□□□□□ -0.96
SNRNP40-201ENST00000263694 OR7D2Q96RA2 312 aa9.06□□□□□ -0.96
SNRNP40-201ENST00000263694 WDR77Q9BQA1 342 aaPredicted RBP9.06□□□□□ -0.96
SNRNP40-201ENST00000263694 OR10A5Q9H207 317 aa9.06□□□□□ -0.96
SNRNP40-201ENST00000263694 MMADHCQ9H3L0 296 aaPredicted RBP9.06□□□□□ -0.96
SNRNP40-201ENST00000263694 LIN28AQ9H9Z2 209 aaKnown RBP9.06□□□□□ -0.96
SNRNP40-201ENST00000263694 NXT1Q9UKK6 140 aaKnown RBP9.06□□□□□ -0.96
SNRNP40-201ENST00000263694 GMEB1Q9Y692 573 aa9.06□□□□□ -0.96
SNRNP40-201ENST00000263694 GXYLT2A0PJZ3 443 aa9.05□□□□□ -0.96
SNRNP40-201ENST00000263694 ELOVL7A1L3X0 281 aa9.05□□□□□ -0.96
SNRNP40-201ENST00000263694 FAM220BPB1ANY3 271 aa9.05□□□□□ -0.96
SNRNP40-201ENST00000263694 ACOT8O14734 319 aa9.05□□□□□ -0.96
SNRNP40-201ENST00000263694 ARPC2O15144 300 aa9.05□□□□□ -0.96
SNRNP40-201ENST00000263694 PSMG1O95456 288 aa9.05□□□□□ -0.96
SNRNP40-201ENST00000263694 CELA2AP08217 269 aa9.05□□□□□ -0.96
SNRNP40-201ENST00000263694 RAB40ALP0C0E4 278 aa9.05□□□□□ -0.96
SNRNP40-201ENST00000263694 ATP6V1B2P21281 511 aa9.05□□□□□ -0.96
SNRNP40-201ENST00000263694 SDHBP21912 280 aa9.05□□□□□ -0.96
SNRNP40-201ENST00000263694 AQP1P29972 269 aa9.05□□□□□ -0.96
SNRNP40-201ENST00000263694 OTX2P32243 289 aa9.05□□□□□ -0.96
SNRNP40-201ENST00000263694 GALNSP34059 522 aa9.05□□□□□ -0.96
SNRNP40-201ENST00000263694 MAN2A2P49641 1150 aa9.05□□□□□ -0.96
SNRNP40-201ENST00000263694 PRIM2P49643 509 aa9.05□□□□□ -0.96
SNRNP40-201ENST00000263694 SLC37A1P57057 533 aa9.05□□□□□ -0.96
SNRNP40-201ENST00000263694 CORO7P57737 925 aa9.05□□□□□ -0.96
SNRNP40-201ENST00000263694 DSTNP60981 165 aa9.05□□□□□ -0.96
SNRNP40-201ENST00000263694 RPS15P62841 145 aaKnown RBP9.05□□□□□ -0.96
SNRNP40-201ENST00000263694 VAC14Q08AM6 782 aa9.05□□□□□ -0.96
SNRNP40-201ENST00000263694 ZNF155Q12901 538 aaPredicted RBP9.05□□□□□ -0.96
SNRNP40-201ENST00000263694 BIKQ13323 160 aa9.05□□□□□ -0.96
SNRNP40-201ENST00000263694 TRIM25Q14258 630 aaKnown RBP9.05□□□□□ -0.96
SNRNP40-201ENST00000263694 KPNB1Q14974 876 aaKnown RBP9.05□□□□□ -0.96
SNRNP40-201ENST00000263694 MAPK11Q15759 364 aa9.05□□□□□ -0.96
SNRNP40-201ENST00000263694 NNATQ16517 81 aa9.05□□□□□ -0.96
SNRNP40-201ENST00000263694 SYPL1Q16563 259 aa9.05□□□□□ -0.96
SNRNP40-201ENST00000263694 DUSP5Q16690 384 aa9.05□□□□□ -0.96
SNRNP40-201ENST00000263694 GCNT6Q5T4J0 391 aa9.05□□□□□ -0.96
SNRNP40-201ENST00000263694 C1orf146Q5VVC0 180 aa9.05□□□□□ -0.96
SNRNP40-201ENST00000263694 PAPD4Q6PIY7 484 aaKnown RBP9.05□□□□□ -0.96
SNRNP40-201ENST00000263694 HMGN2P46Q86SG4 172 aa9.05□□□□□ -0.96
SNRNP40-201ENST00000263694 SERPINA11Q86U17 422 aa9.05□□□□□ -0.96
SNRNP40-201ENST00000263694 VASH2Q86V25 355 aa9.05□□□□□ -0.96
SNRNP40-201ENST00000263694 DTX1Q86Y01 620 aa9.05□□□□□ -0.96
SNRNP40-201ENST00000263694 IL22RA1Q8N6P7 574 aa9.05□□□□□ -0.96
SNRNP40-201ENST00000263694 ZNF615Q8N8J6 731 aa9.05□□□□□ -0.96
SNRNP40-201ENST00000263694 NFAM1Q8NET5 270 aaPredicted RBP9.05□□□□□ -0.96
SNRNP40-201ENST00000263694 OR4N2Q8NGD1 307 aa9.05□□□□□ -0.96
SNRNP40-201ENST00000263694 C16orf52Q8NHV5 167 aa9.05□□□□□ -0.96
SNRNP40-201ENST00000263694 NFKBIDQ8NI38 313 aa9.05□□□□□ -0.96
SNRNP40-201ENST00000263694 FIG4Q92562 907 aa9.05□□□□□ -0.96
SNRNP40-201ENST00000263694 PIK3R3Q92569 461 aa9.05□□□□□ -0.96
SNRNP40-201ENST00000263694 CDS1Q92903 461 aa9.05□□□□□ -0.96
SNRNP40-201ENST00000263694 NCLNQ969V3 563 aa9.05□□□□□ -0.96
SNRNP40-201ENST00000263694 MOAP1Q96BY2 351 aa9.05□□□□□ -0.96
SNRNP40-201ENST00000263694 MS4A4EQ96PG1 132 aa9.05□□□□□ -0.96
SNRNP40-201ENST00000263694 PELOQ9BRX2 385 aaKnown RBP9.05□□□□□ -0.96
SNRNP40-201ENST00000263694 SCNM1Q9BWG6 230 aa9.05□□□□□ -0.96
SNRNP40-201ENST00000263694 ACTRT3Q9BYD9 372 aa9.05□□□□□ -0.96
SNRNP40-201ENST00000263694 B3GNT4Q9C0J1 378 aa9.05□□□□□ -0.96
SNRNP40-201ENST00000263694 NRSN2Q9GZP1 204 aa9.05□□□□□ -0.96
SNRNP40-201ENST00000263694 DENND2DQ9H6A0 471 aaPredicted RBP9.05□□□□□ -0.96
SNRNP40-201ENST00000263694 FOLH1BQ9HBA9 442 aa9.05□□□□□ -0.96
SNRNP40-201ENST00000263694 FAF1Q9UNN5 650 aaPredicted RBP9.05□□□□□ -0.96
SNRNP40-201ENST00000263694 HEMK1Q9Y5R4 338 aaPredicted RBP9.05□□□□□ -0.96
SNRNP40-201ENST00000263694 HS3ST3B1Q9Y662 390 aa9.05□□□□□ -0.96
SNRNP40-201ENST00000263694 NINQ8N4C6 2090 aa9.04□□□□□ -0.96
SNRNP40-201ENST00000263694 SOCS6O14544 535 aa9.04□□□□□ -0.96
SNRNP40-201ENST00000263694 GSTA4O15217 222 aa9.04□□□□□ -0.96
SNRNP40-201ENST00000263694 GCM2O75603 506 aaPredicted RBP9.04□□□□□ -0.96
SNRNP40-201ENST00000263694 CIB2O75838 187 aa9.04□□□□□ -0.96
SNRNP40-201ENST00000263694 IGKV3-11P04433 115 aa9.04□□□□□ -0.96
SNRNP40-201ENST00000263694 HTR1EP28566 365 aa9.04□□□□□ -0.96
SNRNP40-201ENST00000263694 KHKP50053 298 aa9.04□□□□□ -0.96
SNRNP40-201ENST00000263694 GPR143P51810 404 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms