RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 ZCCHC12Q6PEW1 402 aa21.37■■□□□ 1.01
SMARCB1-201ENST00000263121 RBM44Q6ZP01 1051 aaKnown RBP21.37■■□□□ 1.01
SMARCB1-201ENST00000263121 WDR53Q7Z5U6 358 aaPredicted RBP21.37■■□□□ 1.01
SMARCB1-201ENST00000263121 ADAMTS15Q8TE58 950 aa21.37■■□□□ 1.01
SMARCB1-201ENST00000263121 TPD52L3Q96J77 140 aa21.37■■□□□ 1.01
SMARCB1-201ENST00000263121 PTCHD1Q96NR3 888 aa21.37■■□□□ 1.01
SMARCB1-201ENST00000263121 LRFN3Q9BTN0 628 aa21.37■■□□□ 1.01
SMARCB1-201ENST00000263121 PARD6AQ9NPB6 346 aa21.37■■□□□ 1.01
SMARCB1-201ENST00000263121 GIN1Q9NXP7 522 aa21.37■■□□□ 1.01
SMARCB1-201ENST00000263121 LIPT1Q9Y234 373 aa21.37■■□□□ 1.01
SMARCB1-201ENST00000263121 ASCC3Q8N3C0 2202 aaKnown RBP21.36■■□□□ 1.01
SMARCB1-201ENST00000263121 CACNA1HO95180 2353 aa21.36■■□□□ 1.01
SMARCB1-201ENST00000263121 ONECUT2O95948 504 aa21.36■■□□□ 1.01
SMARCB1-201ENST00000263121 AGR2O95994 175 aa21.36■■□□□ 1.01
SMARCB1-201ENST00000263121 CHRM4P08173 479 aa21.36■■□□□ 1.01
SMARCB1-201ENST00000263121 ACP2P11117 423 aa21.36■■□□□ 1.01
SMARCB1-201ENST00000263121 RORAP35398 523 aa21.36■■□□□ 1.01
SMARCB1-201ENST00000263121 SFT2D3Q587I9 215 aa21.36■■□□□ 1.01
SMARCB1-201ENST00000263121 VWA2Q5GFL6 755 aa21.36■■□□□ 1.01
SMARCB1-201ENST00000263121 ZNF385CQ66K41 422 aaPredicted RBP21.36■■□□□ 1.01
SMARCB1-201ENST00000263121 FKBP9P1Q75LS8 142 aa21.36■■□□□ 1.01
SMARCB1-201ENST00000263121 ZDHHC21Q8IVQ6 265 aa21.36■■□□□ 1.01
SMARCB1-201ENST00000263121 ICA1LQ8NDH6 482 aa21.36■■□□□ 1.01
SMARCB1-201ENST00000263121 BBS10Q8TAM1 723 aa21.36■■□□□ 1.01
SMARCB1-201ENST00000263121 HOXB13Q92826 284 aaPredicted RBP21.36■■□□□ 1.01
SMARCB1-201ENST00000263121 EME1Q96AY2 570 aa21.36■■□□□ 1.01
SMARCB1-201ENST00000263121 ZNF184Q99676 751 aaPredicted RBP21.36■■□□□ 1.01
SMARCB1-201ENST00000263121 BDH2Q9BUT1 245 aa21.36■■□□□ 1.01
SMARCB1-201ENST00000263121 TGIF2Q9GZN2 237 aa21.36■■□□□ 1.01
SMARCB1-201ENST00000263121 NTN4Q9HB63 628 aa21.36■■□□□ 1.01
SMARCB1-201ENST00000263121 DNAJB9Q9UBS3 223 aa21.36■■□□□ 1.01
SMARCB1-201ENST00000263121 IGLV3-12A0A075B6K2 115 aa21.35■■□□□ 1.01
SMARCB1-201ENST00000263121 C4orf47A7E2U8 309 aa21.35■■□□□ 1.01
SMARCB1-201ENST00000263121 COQ9O75208 318 aa21.35■■□□□ 1.01
SMARCB1-201ENST00000263121 MFN2O95140 757 aa21.35■■□□□ 1.01
SMARCB1-201ENST00000263121 MAP3K8P41279 467 aa21.35■■□□□ 1.01
SMARCB1-201ENST00000263121 EFNA3P52797 238 aa21.35■■□□□ 1.01
SMARCB1-201ENST00000263121 MC2RQ01718 297 aa21.35■■□□□ 1.01
SMARCB1-201ENST00000263121 ILKQ13418 452 aa21.35■■□□□ 1.01
SMARCB1-201ENST00000263121 DUSP5Q16690 384 aa21.35■■□□□ 1.01
SMARCB1-201ENST00000263121 CDRT4Q8N9R6 151 aa21.35■■□□□ 1.01
SMARCB1-201ENST00000263121 OR52R1Q8NGF1 315 aa21.35■■□□□ 1.01
SMARCB1-201ENST00000263121 DNAJC9Q8WXX5 260 aa21.35■■□□□ 1.01
SMARCB1-201ENST00000263121 LZICQ8WZA0 190 aa21.35■■□□□ 1.01
SMARCB1-201ENST00000263121 CLIP3Q96DZ5 547 aa21.35■■□□□ 1.01
SMARCB1-201ENST00000263121 RNF31Q96EP0 1072 aa21.35■■□□□ 1.01
SMARCB1-201ENST00000263121 ZNF578Q96N58 590 aaPredicted RBP21.35■■□□□ 1.01
SMARCB1-201ENST00000263121 TRNT1Q96Q11 434 aaKnown RBP21.35■■□□□ 1.01
SMARCB1-201ENST00000263121 CDC6Q99741 560 aa21.35■■□□□ 1.01
SMARCB1-201ENST00000263121 CTSFQ9UBX1 484 aa21.35■■□□□ 1.01
SMARCB1-201ENST00000263121 CNOT11Q9UKZ1 510 aaKnown RBP21.35■■□□□ 1.01
SMARCB1-201ENST00000263121 GPC6Q9Y625 555 aaPredicted RBP21.35■■□□□ 1.01
SMARCB1-201ENST00000263121 SPEGQ15772 3267 aa21.35■■□□□ 1.01
SMARCB1-201ENST00000263121 CST1P01037 141 aa21.34■■□□□ 1.01
SMARCB1-201ENST00000263121 ZNF26P17031 533 aaPredicted RBP21.34■■□□□ 1.01
SMARCB1-201ENST00000263121 VLDLRP98155 873 aa21.34■■□□□ 1.01
SMARCB1-201ENST00000263121 MINDY4Q4G0A6 757 aa21.34■■□□□ 1.01
SMARCB1-201ENST00000263121 NKAIN1Q4KMZ8 207 aa21.34■■□□□ 1.01
SMARCB1-201ENST00000263121 ATAD3BQ5T9A4 648 aa21.34■■□□□ 1.01
SMARCB1-201ENST00000263121 PIWIL3Q7Z3Z3 882 aaKnown RBP21.34■■□□□ 1.01
SMARCB1-201ENST00000263121 EPHX4Q8IUS5 362 aa21.34■■□□□ 1.01
SMARCB1-201ENST00000263121 C7orf57Q8NEG2 295 aa21.34■■□□□ 1.01
SMARCB1-201ENST00000263121 SLC9A6Q92581 669 aa21.34■■□□□ 1.01
SMARCB1-201ENST00000263121 CDS1Q92903 461 aa21.34■■□□□ 1.01
SMARCB1-201ENST00000263121 TSLPQ969D9 159 aa21.34■■□□□ 1.01
SMARCB1-201ENST00000263121 C7orf34Q96L11 122 aa21.34■■□□□ 1.01
SMARCB1-201ENST00000263121 ZNF607Q96SK3 696 aa21.34■■□□□ 1.01
SMARCB1-201ENST00000263121 CIB1Q99828 191 aa21.34■■□□□ 1.01
SMARCB1-201ENST00000263121 PIGUQ9H490 435 aa21.34■■□□□ 1.01
SMARCB1-201ENST00000263121 FBXO8Q9NRD0 319 aa21.34■■□□□ 1.01
SMARCB1-201ENST00000263121 EXD2Q9NVH0 621 aa21.34■■□□□ 1.01
SMARCB1-201ENST00000263121 NCDNQ9UBB6 729 aa21.34■■□□□ 1.01
SMARCB1-201ENST00000263121 A0A0G2JPF8 293 aa21.34■■□□□ 1.01
SMARCB1-201ENST00000263121 HNRNPCL2B2RXH8 293 aa21.34■■□□□ 1.01
SMARCB1-201ENST00000263121 HNRNPCL3B7ZW38 293 aa21.34■■□□□ 1.01
SMARCB1-201ENST00000263121 HRKO00198 91 aa21.34■■□□□ 1.01
SMARCB1-201ENST00000263121 POLR1CO15160 346 aaPredicted RBP21.34■■□□□ 1.01
SMARCB1-201ENST00000263121 GDF9O60383 454 aa21.34■■□□□ 1.01
SMARCB1-201ENST00000263121 FABP3P05413 133 aa21.34■■□□□ 1.01
SMARCB1-201ENST00000263121 HNRNPCL4P0DMR1 293 aa21.34■■□□□ 1.01
SMARCB1-201ENST00000263121 CCL4P13236 92 aa21.34■■□□□ 1.01
SMARCB1-201ENST00000263121 ETS2P15036 469 aa21.34■■□□□ 1.01
SMARCB1-201ENST00000263121 CD247P20963 164 aa21.34■■□□□ 1.01
SMARCB1-201ENST00000263121 TGM1P22735 817 aa21.34■■□□□ 1.01
SMARCB1-201ENST00000263121 FUT7Q11130 342 aa21.34■■□□□ 1.01
SMARCB1-201ENST00000263121 IQCCQ4KMZ1 466 aa21.34■■□□□ 1.01
SMARCB1-201ENST00000263121 IFI44LQ53G44 452 aa21.34■■□□□ 1.01
SMARCB1-201ENST00000263121 MFSD4BQ5TF39 518 aa21.34■■□□□ 1.01
SMARCB1-201ENST00000263121 ARMC8Q8IUR7 673 aa21.34■■□□□ 1.01
SMARCB1-201ENST00000263121 SMYD1Q8NB12 490 aa21.34■■□□□ 1.01
SMARCB1-201ENST00000263121 STACQ99469 402 aa21.34■■□□□ 1.01
SMARCB1-201ENST00000263121 CTRCQ99895 268 aa21.34■■□□□ 1.01
SMARCB1-201ENST00000263121 BTBD2Q9BX70 525 aa21.34■■□□□ 1.01
SMARCB1-201ENST00000263121 RSPO3Q9BXY4 272 aaPredicted RBP21.34■■□□□ 1.01
SMARCB1-201ENST00000263121 COQ10BQ9H8M1 238 aa21.34■■□□□ 1.01
SMARCB1-201ENST00000263121 DUSP22Q9NRW4 184 aa21.34■■□□□ 1.01
SMARCB1-201ENST00000263121 ABCG2Q9UNQ0 655 aa21.34■■□□□ 1.01
SMARCB1-201ENST00000263121 DSPPQ9NZW4 1301 aa21.33■■□□□ 1.01
SMARCB1-201ENST00000263121 TCRBV16S1A1N1A0A5B0 115 aa21.33■■□□□ 1
SMARCB1-201ENST00000263121 SAC3D1A6NKF1 404 aa21.33■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms