RNA–Protein interactions for RNA: ENST00000262570.9

CHCHD3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD3, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-201ENST00000262570 TTC9Q92623 222 aa15.41■□□□□ 0.06
CHCHD3-201ENST00000262570 ZNF354BQ96LW1 612 aa15.41■□□□□ 0.06
CHCHD3-201ENST00000262570 VSTM2LQ96N03 204 aa15.41■□□□□ 0.06
CHCHD3-201ENST00000262570 LRRC37BQ96QE4 947 aa15.41■□□□□ 0.06
CHCHD3-201ENST00000262570 GAL3ST4Q96RP7 486 aa15.41■□□□□ 0.06
CHCHD3-201ENST00000262570 CDCP1Q9H5V8 836 aa15.41■□□□□ 0.06
CHCHD3-201ENST00000262570 LIN28AQ9H9Z2 209 aaKnown RBP15.41■□□□□ 0.06
CHCHD3-201ENST00000262570 TEKT2Q9UIF3 430 aa15.41■□□□□ 0.06
CHCHD3-201ENST00000262570 NDUFAF1Q9Y375 327 aa15.41■□□□□ 0.06
CHCHD3-201ENST00000262570 MAN1A2O60476 641 aa15.4■□□□□ 0.06
CHCHD3-201ENST00000262570 DCTN3O75935 186 aa15.4■□□□□ 0.06
CHCHD3-201ENST00000262570 ZCCHC18P0CG32 403 aa15.4■□□□□ 0.06
CHCHD3-201ENST00000262570 UQCRC2P22695 453 aa15.4■□□□□ 0.06
CHCHD3-201ENST00000262570 PTPN6P29350 595 aa15.4■□□□□ 0.06
CHCHD3-201ENST00000262570 MLF1P58340 268 aa15.4■□□□□ 0.06
CHCHD3-201ENST00000262570 MAPRE2Q15555 327 aa15.4■□□□□ 0.06
CHCHD3-201ENST00000262570 MEP1AQ16819 746 aa15.4■□□□□ 0.06
CHCHD3-201ENST00000262570 SPDYE7PQ495Y7 208 aa15.4■□□□□ 0.06
CHCHD3-201ENST00000262570 C6orf10Q5SRN2 563 aa15.4■□□□□ 0.06
CHCHD3-201ENST00000262570 BHLHB9Q6PI77 547 aa15.4■□□□□ 0.06
CHCHD3-201ENST00000262570 C16orf47Q6ZP98 133 aaPredicted RBP15.4■□□□□ 0.06
CHCHD3-201ENST00000262570 ZNF621Q6ZSS3 439 aa15.4■□□□□ 0.06
CHCHD3-201ENST00000262570 TREML1Q86YW5 311 aa15.4■□□□□ 0.06
CHCHD3-201ENST00000262570 TRIML2Q8N7C3 387 aa15.4■□□□□ 0.06
CHCHD3-201ENST00000262570 OR56A1Q8NGH5 318 aa15.4■□□□□ 0.06
CHCHD3-201ENST00000262570 OR5AK3PQ8NH89 298 aa15.4■□□□□ 0.06
CHCHD3-201ENST00000262570 TP53INP1Q96A56 240 aa15.4■□□□□ 0.06
CHCHD3-201ENST00000262570 MS4A4EQ96PG1 132 aa15.4■□□□□ 0.06
CHCHD3-201ENST00000262570 PHF12Q96QT6 1004 aa15.4■□□□□ 0.06
CHCHD3-201ENST00000262570 SMAD5Q99717 465 aaKnown RBP15.4■□□□□ 0.06
CHCHD3-201ENST00000262570 ITPAQ9BY32 194 aa15.4■□□□□ 0.06
CHCHD3-201ENST00000262570 FOLH1BQ9HBA9 442 aa15.4■□□□□ 0.06
CHCHD3-201ENST00000262570 SLC6A13Q9NSD5 602 aa15.4■□□□□ 0.06
CHCHD3-201ENST00000262570 STMN3Q9NZ72 180 aa15.4■□□□□ 0.06
CHCHD3-201ENST00000262570 LEF1Q9UJU2 399 aaPredicted RBP15.4■□□□□ 0.06
CHCHD3-201ENST00000262570 LOC100653049A0A140TA62 436 aa15.39■□□□□ 0.05
CHCHD3-201ENST00000262570 CAPN14A8MX76 684 aa15.39■□□□□ 0.05
CHCHD3-201ENST00000262570 MKRN2OSH3BPM6 223 aa15.39■□□□□ 0.05
CHCHD3-201ENST00000262570 WWP2O00308 870 aa15.39■□□□□ 0.05
CHCHD3-201ENST00000262570 FBP2O00757 339 aa15.39■□□□□ 0.05
CHCHD3-201ENST00000262570 ANGPT2O15123 496 aa15.39■□□□□ 0.05
CHCHD3-201ENST00000262570 KRT34O76011 436 aa15.39■□□□□ 0.05
CHCHD3-201ENST00000262570 HMGN2P05204 90 aaKnown RBP15.39■□□□□ 0.05
CHCHD3-201ENST00000262570 GSNP06396 782 aa15.39■□□□□ 0.05
CHCHD3-201ENST00000262570 SOAT1P35610 550 aa15.39■□□□□ 0.05
CHCHD3-201ENST00000262570 PPICP45877 212 aa15.39■□□□□ 0.05
CHCHD3-201ENST00000262570 DCAF7P61962 342 aa15.39■□□□□ 0.05
CHCHD3-201ENST00000262570 GAB1Q13480 694 aa15.39■□□□□ 0.05
CHCHD3-201ENST00000262570 TP53BP2Q13625 1128 aa15.39■□□□□ 0.05
CHCHD3-201ENST00000262570 ABHD17BQ5VST6 288 aa15.39■□□□□ 0.05
CHCHD3-201ENST00000262570 HLA-DQA1Q5Y7H0 255 aa15.39■□□□□ 0.05
CHCHD3-201ENST00000262570 ISLR2Q6UXK2 745 aa15.39■□□□□ 0.05
CHCHD3-201ENST00000262570 SZRD1Q7Z422 152 aa15.39■□□□□ 0.05
CHCHD3-201ENST00000262570 RETREG3Q86VR2 466 aa15.39■□□□□ 0.05
CHCHD3-201ENST00000262570 SNX32Q86XE0 403 aa15.39■□□□□ 0.05
CHCHD3-201ENST00000262570 CLEC4FQ8N1N0 589 aa15.39■□□□□ 0.05
CHCHD3-201ENST00000262570 DPP10Q8N608 796 aa15.39■□□□□ 0.05
CHCHD3-201ENST00000262570 RP9Q8TA86 221 aaKnown RBP15.39■□□□□ 0.05
CHCHD3-201ENST00000262570 HOXB13Q92826 284 aaPredicted RBP15.39■□□□□ 0.05
CHCHD3-201ENST00000262570 ABHD17AQ96GS6 310 aa15.39■□□□□ 0.05
CHCHD3-201ENST00000262570 BTBD9Q96Q07 612 aa15.39■□□□□ 0.05
CHCHD3-201ENST00000262570 LMF1Q96S06 567 aa15.39■□□□□ 0.05
CHCHD3-201ENST00000262570 PAIP1Q9H074 479 aaKnown RBP15.39■□□□□ 0.05
CHCHD3-201ENST00000262570 GPATCH2Q9NW75 528 aa15.39■□□□□ 0.05
CHCHD3-201ENST00000262570 SLAMF8Q9P0V8 285 aa15.39■□□□□ 0.05
CHCHD3-201ENST00000262570 VPS4AQ9UN37 437 aa15.39■□□□□ 0.05
CHCHD3-201ENST00000262570 GPR55Q9Y2T6 319 aaPredicted RBP15.39■□□□□ 0.05
CHCHD3-201ENST00000262570 YARS2Q9Y2Z4 477 aaKnown RBP15.39■□□□□ 0.05
CHCHD3-201ENST00000262570 NBEAQ8NFP9 2946 aa15.38■□□□□ 0.05
CHCHD3-201ENST00000262570 A0A096LPI6 279 aa15.38■□□□□ 0.05
CHCHD3-201ENST00000262570 RNF103-CHMP3A0A140T963 221 aa15.38■□□□□ 0.05
CHCHD3-201ENST00000262570 ERN1O75460 977 aaKnown RBP15.38■□□□□ 0.05
CHCHD3-201ENST00000262570 ITGA10O75578 1167 aa15.38■□□□□ 0.05
CHCHD3-201ENST00000262570 OR2J2O76002 312 aa15.38■□□□□ 0.05
CHCHD3-201ENST00000262570 ALPPP05187 535 aa15.38■□□□□ 0.05
CHCHD3-201ENST00000262570 CT45A8P0DMV1 189 aa15.38■□□□□ 0.05
CHCHD3-201ENST00000262570 CT45A9P0DMV2 189 aa15.38■□□□□ 0.05
CHCHD3-201ENST00000262570 HOXB9P17482 250 aaPredicted RBP15.38■□□□□ 0.05
CHCHD3-201ENST00000262570 DRD5P21918 477 aa15.38■□□□□ 0.05
CHCHD3-201ENST00000262570 MAP3K8P41279 467 aa15.38■□□□□ 0.05
CHCHD3-201ENST00000262570 PSG6Q00889 435 aa15.38■□□□□ 0.05
CHCHD3-201ENST00000262570 CYLC2Q14093 348 aaPredicted RBP15.38■□□□□ 0.05
CHCHD3-201ENST00000262570 CT45A2Q5DJT8 189 aa15.38■□□□□ 0.05
CHCHD3-201ENST00000262570 PIGGQ5H8A4 983 aa15.38■□□□□ 0.05
CHCHD3-201ENST00000262570 EXOSC6Q5RKV6 272 aaKnown RBP15.38■□□□□ 0.05
CHCHD3-201ENST00000262570 LRIF1Q5T3J3 769 aa15.38■□□□□ 0.05
CHCHD3-201ENST00000262570 MFSD12Q6NUT3 480 aa15.38■□□□□ 0.05
CHCHD3-201ENST00000262570 ZCCHC12Q6PEW1 402 aa15.38■□□□□ 0.05
CHCHD3-201ENST00000262570 IGFL2Q6UWQ7 119 aa15.38■□□□□ 0.05
CHCHD3-201ENST00000262570 DNAJC14Q6Y2X3 702 aaPredicted RBP15.38■□□□□ 0.05
CHCHD3-201ENST00000262570 C6orf120Q7Z4R8 191 aa15.38■□□□□ 0.05
CHCHD3-201ENST00000262570 CDRT4Q8N9R6 151 aa15.38■□□□□ 0.05
CHCHD3-201ENST00000262570 NEURL3Q96EH8 262 aa15.38■□□□□ 0.05
CHCHD3-201ENST00000262570 LCORQ96JN0 433 aaPredicted RBP15.38■□□□□ 0.05
CHCHD3-201ENST00000262570 ARHGAP9Q9BRR9 750 aa15.38■□□□□ 0.05
CHCHD3-201ENST00000262570 SLC35A5Q9BS91 424 aa15.38■□□□□ 0.05
CHCHD3-201ENST00000262570 LMF2Q9BU23 707 aaKnown RBP15.38■□□□□ 0.05
CHCHD3-201ENST00000262570 NXF5Q9H1B4 397 aaKnown RBP15.38■□□□□ 0.05
CHCHD3-201ENST00000262570 EPS8L2Q9H6S3 715 aa15.38■□□□□ 0.05
CHCHD3-201ENST00000262570 ZBTB20Q9HC78 741 aaPredicted RBP15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms