RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 TMEM215Q68D42 235 aa12.26□□□□□ -0.45
SNX1-201ENST00000261889 KIF18BQ86Y91 864 aa12.26□□□□□ -0.45
SNX1-201ENST00000261889 OR51G2Q8NGK0 314 aa12.26□□□□□ -0.45
SNX1-201ENST00000261889 NEIL3Q8TAT5 605 aa12.26□□□□□ -0.45
SNX1-201ENST00000261889 HCAR2Q8TDS4 363 aa12.26□□□□□ -0.45
SNX1-201ENST00000261889 SLC25A19Q9HC21 320 aa12.26□□□□□ -0.45
SNX1-201ENST00000261889 NUDT15Q9NV35 164 aa12.26□□□□□ -0.45
SNX1-201ENST00000261889 NDUFB11Q9NX14 153 aa12.26□□□□□ -0.45
SNX1-201ENST00000261889 I3L521 148 aa12.26□□□□□ -0.45
SNX1-201ENST00000261889 BTN3A3O00478 584 aa12.26□□□□□ -0.45
SNX1-201ENST00000261889 CCL16O15467 120 aa12.26□□□□□ -0.45
SNX1-201ENST00000261889 NARSO43776 548 aaKnown RBP12.26□□□□□ -0.45
SNX1-201ENST00000261889 REM1O75628 298 aa12.26□□□□□ -0.45
SNX1-201ENST00000261889 GYPBP06028 91 aa12.26□□□□□ -0.45
SNX1-201ENST00000261889 CTSLP07711 333 aa12.26□□□□□ -0.45
SNX1-201ENST00000261889 TFPIP10646 304 aa12.26□□□□□ -0.45
SNX1-201ENST00000261889 GNSP15586 552 aa12.26□□□□□ -0.45
SNX1-201ENST00000261889 FGFBP1Q14512 234 aa12.26□□□□□ -0.45
SNX1-201ENST00000261889 COL26A1Q96A83 441 aa12.26□□□□□ -0.45
SNX1-201ENST00000261889 TBC1D20Q96BZ9 403 aa12.26□□□□□ -0.45
SNX1-201ENST00000261889 MAGEB10Q96LZ2 347 aaPredicted RBP12.26□□□□□ -0.45
SNX1-201ENST00000261889 MAPKAP1Q9BPZ7 522 aa12.26□□□□□ -0.45
SNX1-201ENST00000261889 C17orf62Q9BQA9 187 aa12.26□□□□□ -0.45
SNX1-201ENST00000261889 ORAI3Q9BRQ5 295 aa12.26□□□□□ -0.45
SNX1-201ENST00000261889 C11orf49Q9H6J7 331 aa12.26□□□□□ -0.45
SNX1-201ENST00000261889 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.26□□□□□ -0.45
SNX1-201ENST00000261889 POM121CA8CG34 1229 aa12.26□□□□□ -0.45
SNX1-201ENST00000261889 ZNF197O14709 1029 aa12.26□□□□□ -0.45
SNX1-201ENST00000261889 KIAA0355O15063 1070 aa12.26□□□□□ -0.45
SNX1-201ENST00000261889 NPC1O15118 1278 aa12.26□□□□□ -0.45
SNX1-201ENST00000261889 PTHLHP12272 177 aa12.26□□□□□ -0.45
SNX1-201ENST00000261889 ARSBP15848 533 aa12.26□□□□□ -0.45
SNX1-201ENST00000261889 AHRP35869 848 aa12.26□□□□□ -0.45
SNX1-201ENST00000261889 ASMTP46597 345 aa12.26□□□□□ -0.45
SNX1-201ENST00000261889 CCR6P51684 374 aa12.26□□□□□ -0.45
SNX1-201ENST00000261889 NCF4Q15080 339 aa12.26□□□□□ -0.45
SNX1-201ENST00000261889 KLHL12Q53G59 568 aa12.26□□□□□ -0.45
SNX1-201ENST00000261889 OXR1Q8N573 874 aa12.26□□□□□ -0.45
SNX1-201ENST00000261889 ING5Q8WYH8 240 aa12.26□□□□□ -0.45
SNX1-201ENST00000261889 MSANTD3Q96H12 275 aa12.26□□□□□ -0.45
SNX1-201ENST00000261889 TMEM169Q96HH4 297 aa12.26□□□□□ -0.45
SNX1-201ENST00000261889 EXTL2Q9UBQ6 330 aa12.26□□□□□ -0.45
SNX1-201ENST00000261889 HCN2Q9UL51 889 aa12.26□□□□□ -0.45
SNX1-201ENST00000261889 WNT6Q9Y6F9 365 aa12.26□□□□□ -0.45
SNX1-201ENST00000261889 VPS13AQ96RL7 3174 aa12.25□□□□□ -0.45
SNX1-201ENST00000261889 TMEM189-UBE2V1I3L0A0 370 aa12.25□□□□□ -0.45
SNX1-201ENST00000261889 PLPP1O14494 284 aa12.25□□□□□ -0.45
SNX1-201ENST00000261889 ARAFP10398 606 aa12.25□□□□□ -0.45
SNX1-201ENST00000261889 ELK1P19419 428 aa12.25□□□□□ -0.45
SNX1-201ENST00000261889 RECQLP46063 649 aaPredicted RBP12.25□□□□□ -0.45
SNX1-201ENST00000261889 GIPRP48546 466 aa12.25□□□□□ -0.45
SNX1-201ENST00000261889 VN1R5Q7Z5H4 357 aa12.25□□□□□ -0.45
SNX1-201ENST00000261889 OR51L1Q8NGJ5 315 aa12.25□□□□□ -0.45
SNX1-201ENST00000261889 OR2A12Q8NGT7 310 aa12.25□□□□□ -0.45
SNX1-201ENST00000261889 DPCDQ9BVM2 203 aaPredicted RBP12.25□□□□□ -0.45
SNX1-201ENST00000261889 OR51I1Q9H343 314 aa12.25□□□□□ -0.45
SNX1-201ENST00000261889 DYRK1BQ9Y463 629 aa12.25□□□□□ -0.45
SNX1-201ENST00000261889 INMT-MINDY4F8WBC2 141 aa12.25□□□□□ -0.45
SNX1-201ENST00000261889 H7C4K7 107 aa12.25□□□□□ -0.45
SNX1-201ENST00000261889 HMGN4O00479 90 aa12.25□□□□□ -0.45
SNX1-201ENST00000261889 SMAD9O15198 467 aaKnown RBP12.25□□□□□ -0.45
SNX1-201ENST00000261889 TMPRSS11DO60235 418 aa12.25□□□□□ -0.45
SNX1-201ENST00000261889 ACVR1BP36896 505 aa12.25□□□□□ -0.45
SNX1-201ENST00000261889 HCCSP53701 268 aa12.25□□□□□ -0.45
SNX1-201ENST00000261889 SIGIRRQ6IA17 410 aa12.25□□□□□ -0.45
SNX1-201ENST00000261889 FAM83HQ6ZRV2 1179 aaPredicted RBP12.25□□□□□ -0.45
SNX1-201ENST00000261889 FAM9CQ8IZT9 166 aa12.25□□□□□ -0.45
SNX1-201ENST00000261889 OR11H4Q8NGC9 324 aa12.25□□□□□ -0.45
SNX1-201ENST00000261889 MKRN2Q9H000 416 aaKnown RBP12.25□□□□□ -0.45
SNX1-201ENST00000261889 C6orf106Q9H6K1 298 aaPredicted RBP12.25□□□□□ -0.45
SNX1-201ENST00000261889 ZCCHC3Q9NUD5 404 aaKnown RBP12.25□□□□□ -0.45
SNX1-201ENST00000261889 RPL36Q9Y3U8 105 aaKnown RBP12.25□□□□□ -0.45
SNX1-201ENST00000261889 SIRT4Q9Y6E7 314 aaPredicted RBP12.25□□□□□ -0.45
SNX1-201ENST00000261889 PLXNA3P51805 1871 aa12.25□□□□□ -0.45
SNX1-201ENST00000261889 A0A075B6Q4 140 aa12.24□□□□□ -0.45
SNX1-201ENST00000261889 H0YIV9 168 aa12.24□□□□□ -0.45
SNX1-201ENST00000261889 PI15O43692 258 aa12.24□□□□□ -0.45
SNX1-201ENST00000261889 NOS1APO75052 506 aaPredicted RBP12.24□□□□□ -0.45
SNX1-201ENST00000261889 HSD3B1P14060 373 aa12.24□□□□□ -0.45
SNX1-201ENST00000261889 MAGEB1P43366 347 aa12.24□□□□□ -0.45
SNX1-201ENST00000261889 LIMS1P48059 325 aa12.24□□□□□ -0.45
SNX1-201ENST00000261889 AP1S2P56377 157 aa12.24□□□□□ -0.45
SNX1-201ENST00000261889 VSX2P58304 361 aaPredicted RBP12.24□□□□□ -0.45
SNX1-201ENST00000261889 NTHL1P78549 312 aa12.24□□□□□ -0.45
SNX1-201ENST00000261889 MRPL28Q13084 256 aaKnown RBP12.24□□□□□ -0.45
SNX1-201ENST00000261889 SPIN4Q56A73 249 aa12.24□□□□□ -0.45
SNX1-201ENST00000261889 SLX4IPQ5VYV7 408 aa12.24□□□□□ -0.45
SNX1-201ENST00000261889 RAET1GQ6H3X3 334 aa12.24□□□□□ -0.45
SNX1-201ENST00000261889 ANKRD54Q6NXT1 300 aa12.24□□□□□ -0.45
SNX1-201ENST00000261889 GDPD4Q6W3E5 623 aa12.24□□□□□ -0.45
SNX1-201ENST00000261889 PRSS45Q7RTY3 260 aa12.24□□□□□ -0.45
SNX1-201ENST00000261889 PRICKLE2Q7Z3G6 844 aa12.24□□□□□ -0.45
SNX1-201ENST00000261889 VRK2Q86Y07 508 aa12.24□□□□□ -0.45
SNX1-201ENST00000261889 CCDC116Q8IYX3 515 aa12.24□□□□□ -0.45
SNX1-201ENST00000261889 GDF15Q99988 308 aa12.24□□□□□ -0.45
SNX1-201ENST00000261889 E9PQ18 207 aa12.24□□□□□ -0.45
SNX1-201ENST00000261889 ARHGEF9O43307 516 aa12.24□□□□□ -0.45
SNX1-201ENST00000261889 SERPINI2O75830 405 aa12.24□□□□□ -0.45
SNX1-201ENST00000261889 GATBO75879 557 aaKnown RBP12.24□□□□□ -0.45
SNX1-201ENST00000261889 ELFN1P0C7U0 828 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms