RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 HUS1BQ8NHY5 278 aa10.22□□□□□ -0.77
CHRNA1-201ENST00000261007 MTERF3Q96E29 417 aa10.22□□□□□ -0.77
CHRNA1-201ENST00000261007 MTERF1Q99551 399 aaKnown RBP10.22□□□□□ -0.77
CHRNA1-201ENST00000261007 C1QTNF7Q9BXJ2 289 aa10.22□□□□□ -0.77
CHRNA1-201ENST00000261007 BHLHE41Q9C0J9 482 aaPredicted RBP10.22□□□□□ -0.77
CHRNA1-201ENST00000261007 PIGUQ9H490 435 aa10.22□□□□□ -0.77
CHRNA1-201ENST00000261007 NMNAT1Q9HAN9 279 aaPredicted RBP10.22□□□□□ -0.77
CHRNA1-201ENST00000261007 MCUBQ9NWR8 336 aa10.22□□□□□ -0.77
CHRNA1-201ENST00000261007 KCND3Q9UK17 655 aa10.22□□□□□ -0.77
CHRNA1-201ENST00000261007 RAB23Q9ULC3 237 aa10.22□□□□□ -0.77
CHRNA1-201ENST00000261007 DIMT1Q9UNQ2 313 aaKnown RBP10.22□□□□□ -0.77
CHRNA1-201ENST00000261007 KIAA0100Q14667 2235 aaKnown RBP10.22□□□□□ -0.77
CHRNA1-201ENST00000261007 GABRR3A8MPY1 467 aa10.21□□□□□ -0.77
CHRNA1-201ENST00000261007 MEN1O00255 615 aa10.21□□□□□ -0.77
CHRNA1-201ENST00000261007 WWP2O00308 870 aa10.21□□□□□ -0.77
CHRNA1-201ENST00000261007 CLEC2LP0C7M8 214 aa10.21□□□□□ -0.77
CHRNA1-201ENST00000261007 TNFRSF1BP20333 461 aa10.21□□□□□ -0.77
CHRNA1-201ENST00000261007 ACADLP28330 430 aa10.21□□□□□ -0.77
CHRNA1-201ENST00000261007 FGF9P31371 208 aaPredicted RBP10.21□□□□□ -0.77
CHRNA1-201ENST00000261007 GSTM5P46439 218 aa10.21□□□□□ -0.77
CHRNA1-201ENST00000261007 MVDP53602 400 aa10.21□□□□□ -0.77
CHRNA1-201ENST00000261007 ZNF91Q05481 1191 aa10.21□□□□□ -0.77
CHRNA1-201ENST00000261007 RGS1Q08116 209 aa10.21□□□□□ -0.77
CHRNA1-201ENST00000261007 ZNF763Q0D2J5 394 aa10.21□□□□□ -0.77
CHRNA1-201ENST00000261007 BAMBIQ13145 260 aa10.21□□□□□ -0.77
CHRNA1-201ENST00000261007 RUNX3Q13761 415 aa10.21□□□□□ -0.77
CHRNA1-201ENST00000261007 SCARB2Q14108 478 aa10.21□□□□□ -0.77
CHRNA1-201ENST00000261007 AGERQ15109 404 aa10.21□□□□□ -0.77
CHRNA1-201ENST00000261007 TJAP1Q5JTD0 557 aa10.21□□□□□ -0.77
CHRNA1-201ENST00000261007 LIPKQ5VXJ0 399 aa10.21□□□□□ -0.77
CHRNA1-201ENST00000261007 TEX261Q6UWH6 196 aa10.21□□□□□ -0.77
CHRNA1-201ENST00000261007 PDZD3Q86UT5 571 aa10.21□□□□□ -0.77
CHRNA1-201ENST00000261007 DCUN1D3Q8IWE4 304 aa10.21□□□□□ -0.77
CHRNA1-201ENST00000261007 YAF2Q8IY57 180 aa10.21□□□□□ -0.77
CHRNA1-201ENST00000261007 KRT78Q8N1N4 520 aa10.21□□□□□ -0.77
CHRNA1-201ENST00000261007 LILRA3Q8N6C8 439 aaPredicted RBP10.21□□□□□ -0.77
CHRNA1-201ENST00000261007 C12orf76Q8N812 135 aaPredicted RBP10.21□□□□□ -0.77
CHRNA1-201ENST00000261007 OR4A15Q8NGL6 344 aa10.21□□□□□ -0.77
CHRNA1-201ENST00000261007 SLC5A11Q8WWX8 675 aa10.21□□□□□ -0.77
CHRNA1-201ENST00000261007 NEIL2Q969S2 332 aa10.21□□□□□ -0.77
CHRNA1-201ENST00000261007 UPRTQ96BW1 309 aa10.21□□□□□ -0.77
CHRNA1-201ENST00000261007 COX14Q96I36 57 aa10.21□□□□□ -0.77
CHRNA1-201ENST00000261007 KATNB1Q9BVA0 655 aa10.21□□□□□ -0.77
CHRNA1-201ENST00000261007 ACAT2Q9BWD1 397 aa10.21□□□□□ -0.77
CHRNA1-201ENST00000261007 PITHD1Q9GZP4 211 aaPredicted RBP10.21□□□□□ -0.77
CHRNA1-201ENST00000261007 PCBD2Q9H0N5 130 aa10.21□□□□□ -0.77
CHRNA1-201ENST00000261007 SPNS1Q9H2V7 528 aa10.21□□□□□ -0.77
CHRNA1-201ENST00000261007 RANBP3Q9H6Z4 567 aaPredicted RBP10.21□□□□□ -0.77
CHRNA1-201ENST00000261007 PRM3Q9NNZ6 103 aa10.21□□□□□ -0.77
CHRNA1-201ENST00000261007 NLKQ9UBE8 527 aa10.21□□□□□ -0.77
CHRNA1-201ENST00000261007 REV1Q9UBZ9 1251 aa10.21□□□□□ -0.77
CHRNA1-201ENST00000261007 ATP6V1HQ9UI12 483 aa10.21□□□□□ -0.77
CHRNA1-201ENST00000261007 HCN2Q9UL51 889 aa10.21□□□□□ -0.77
CHRNA1-201ENST00000261007 MGAT4BQ9UQ53 548 aa10.21□□□□□ -0.77
CHRNA1-201ENST00000261007 GSTK1Q9Y2Q3 226 aa10.21□□□□□ -0.77
CHRNA1-201ENST00000261007 CDH10Q9Y6N8 788 aa10.21□□□□□ -0.77
CHRNA1-201ENST00000261007 U3KQ87 197 aa10.21□□□□□ -0.77
CHRNA1-201ENST00000261007 INMT-MINDY4F8WBC2 141 aa10.21□□□□□ -0.78
CHRNA1-201ENST00000261007 OPN1SWP03999 348 aa10.21□□□□□ -0.78
CHRNA1-201ENST00000261007 IFI30P13284 250 aa10.21□□□□□ -0.78
CHRNA1-201ENST00000261007 NPPBP16860 134 aa10.21□□□□□ -0.78
CHRNA1-201ENST00000261007 ZNF8P17098 575 aaPredicted RBP10.21□□□□□ -0.78
CHRNA1-201ENST00000261007 TNNI3P19429 210 aa10.21□□□□□ -0.78
CHRNA1-201ENST00000261007 POU3F3P20264 500 aaPredicted RBP10.21□□□□□ -0.78
CHRNA1-201ENST00000261007 IDSP22304 550 aa10.21□□□□□ -0.78
CHRNA1-201ENST00000261007 APEX1P27695 318 aaKnown RBP10.21□□□□□ -0.78
CHRNA1-201ENST00000261007 TALDO1P37837 337 aa10.21□□□□□ -0.78
CHRNA1-201ENST00000261007 P2RY2P41231 377 aa10.21□□□□□ -0.78
CHRNA1-201ENST00000261007 CRATP43155 626 aa10.21□□□□□ -0.78
CHRNA1-201ENST00000261007 EVX1P49640 407 aa10.21□□□□□ -0.78
CHRNA1-201ENST00000261007 EEF1A2Q05639 463 aaKnown RBP10.21□□□□□ -0.78
CHRNA1-201ENST00000261007 GAB1Q13480 694 aa10.21□□□□□ -0.78
CHRNA1-201ENST00000261007 TPBGQ13641 420 aa10.21□□□□□ -0.78
CHRNA1-201ENST00000261007 SLBPQ14493 270 aaKnown RBP eCLIP10.21□□□□□ -0.78
CHRNA1-201ENST00000261007 ZNF630Q2M218 657 aaPredicted RBP10.21□□□□□ -0.78
CHRNA1-201ENST00000261007 COL28A1Q2UY09 1125 aa10.21□□□□□ -0.78
CHRNA1-201ENST00000261007 LRRK1Q38SD2 2015 aa10.21□□□□□ -0.78
CHRNA1-201ENST00000261007 CCSMST1Q4G0I0 132 aa10.21□□□□□ -0.78
CHRNA1-201ENST00000261007 C22orf42Q6IC83 251 aa10.21□□□□□ -0.78
CHRNA1-201ENST00000261007 SDE2Q6IQ49 451 aa10.21□□□□□ -0.78
CHRNA1-201ENST00000261007 FAM122CQ6P4D5 195 aa10.21□□□□□ -0.78
CHRNA1-201ENST00000261007 NXPE4Q6UWF7 544 aa10.21□□□□□ -0.78
CHRNA1-201ENST00000261007 CASP12Q6UXS9 341 aa10.21□□□□□ -0.78
CHRNA1-201ENST00000261007 USP30Q70CQ3 517 aa10.21□□□□□ -0.78
CHRNA1-201ENST00000261007 IKBIPQ70UQ0 350 aa10.21□□□□□ -0.78
CHRNA1-201ENST00000261007 GET4Q7L5D6 327 aaPredicted RBP10.21□□□□□ -0.78
CHRNA1-201ENST00000261007 LRRTM4Q86VH4 590 aa10.21□□□□□ -0.78
CHRNA1-201ENST00000261007 LAPTM4BQ86VI4 370 aa10.21□□□□□ -0.78
CHRNA1-201ENST00000261007 AMZ2Q86W34 360 aa10.21□□□□□ -0.78
CHRNA1-201ENST00000261007 KIF18BQ86Y91 864 aa10.21□□□□□ -0.78
CHRNA1-201ENST00000261007 GPALPP1Q8IXQ4 340 aa10.21□□□□□ -0.78
CHRNA1-201ENST00000261007 UBE2J2Q8N2K1 259 aa10.21□□□□□ -0.78
CHRNA1-201ENST00000261007 RAB42Q8N4Z0 105 aa10.21□□□□□ -0.78
CHRNA1-201ENST00000261007 OXR1Q8N573 874 aa10.21□□□□□ -0.78
CHRNA1-201ENST00000261007 TMEM145Q8NBT3 493 aa10.21□□□□□ -0.78
CHRNA1-201ENST00000261007 SLC37A3Q8NCC5 494 aa10.21□□□□□ -0.78
CHRNA1-201ENST00000261007 TOR1AIP2Q8NFQ8 470 aa10.21□□□□□ -0.78
CHRNA1-201ENST00000261007 IL4I1Q96RQ9 567 aa10.21□□□□□ -0.78
CHRNA1-201ENST00000261007 TSSK6Q9BXA6 273 aa10.21□□□□□ -0.78
CHRNA1-201ENST00000261007 PRSS16Q9NQE7 514 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms