RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 TBX19O60806 448 aa9.54□□□□□ -0.88
COPB1-201ENST00000249923 ZIC2O95409 532 aaPredicted RBP9.54□□□□□ -0.88
COPB1-201ENST00000249923 PTTG1O95997 202 aa9.54□□□□□ -0.88
COPB1-201ENST00000249923 ATF4P18848 351 aaPredicted RBP9.54□□□□□ -0.88
COPB1-201ENST00000249923 DRD3P35462 400 aa9.54□□□□□ -0.88
COPB1-201ENST00000249923 RPL3P39023 403 aaKnown RBP9.54□□□□□ -0.88
COPB1-201ENST00000249923 ETV5P41161 510 aa9.54□□□□□ -0.88
COPB1-201ENST00000249923 ETV1P50549 477 aa9.54□□□□□ -0.88
COPB1-201ENST00000249923 TCEA2Q15560 299 aa9.54□□□□□ -0.88
COPB1-201ENST00000249923 PIP5KL1Q5T9C9 394 aa9.54□□□□□ -0.88
COPB1-201ENST00000249923 LIPKQ5VXJ0 399 aa9.54□□□□□ -0.88
COPB1-201ENST00000249923 DCUN1D3Q8IWE4 304 aa9.54□□□□□ -0.88
COPB1-201ENST00000249923 REM2Q8IYK8 340 aaPredicted RBP9.54□□□□□ -0.88
COPB1-201ENST00000249923 TBC1D19Q8N5T2 526 aa9.54□□□□□ -0.88
COPB1-201ENST00000249923 TMIEQ8NEW7 156 aa9.54□□□□□ -0.88
COPB1-201ENST00000249923 DCLRE1CQ96SD1 692 aaKnown RBP9.54□□□□□ -0.88
COPB1-201ENST00000249923 HOXD1Q9GZZ0 328 aa9.54□□□□□ -0.88
COPB1-201ENST00000249923 FAM240BA0A1B0GVZ2 78 aa9.54□□□□□ -0.88
COPB1-201ENST00000249923 PRNPP04156 253 aa9.54□□□□□ -0.88
COPB1-201ENST00000249923 CLEC2LP0C7M8 214 aa9.54□□□□□ -0.88
COPB1-201ENST00000249923 CHRNB1P11230 501 aa9.54□□□□□ -0.88
COPB1-201ENST00000249923 DDX5P17844 614 aaKnown RBP9.54□□□□□ -0.88
COPB1-201ENST00000249923 PRMT2P55345 433 aa9.54□□□□□ -0.88
COPB1-201ENST00000249923 RAB8AP61006 207 aa9.54□□□□□ -0.88
COPB1-201ENST00000249923 ZMYND11Q15326 602 aa9.54□□□□□ -0.88
COPB1-201ENST00000249923 ARHGAP15Q53QZ3 475 aa9.54□□□□□ -0.88
COPB1-201ENST00000249923 SYT14P1Q58G82 188 aa9.54□□□□□ -0.88
COPB1-201ENST00000249923 METRNLQ641Q3 311 aa9.54□□□□□ -0.88
COPB1-201ENST00000249923 LYPD8Q6UX82 237 aa9.54□□□□□ -0.88
COPB1-201ENST00000249923 NANOGP1Q8N7R0 232 aa9.54□□□□□ -0.88
COPB1-201ENST00000249923 C12orf76Q8N812 135 aaPredicted RBP9.54□□□□□ -0.88
COPB1-201ENST00000249923 OTUB2Q96DC9 234 aa9.54□□□□□ -0.88
COPB1-201ENST00000249923 AMDHD1Q96NU7 426 aa9.54□□□□□ -0.88
COPB1-201ENST00000249923 CTRCQ99895 268 aa9.54□□□□□ -0.88
COPB1-201ENST00000249923 SLC30A2Q9BRI3 323 aa9.54□□□□□ -0.88
COPB1-201ENST00000249923 YIPF4Q9BSR8 244 aa9.54□□□□□ -0.88
COPB1-201ENST00000249923 OR51I1Q9H343 314 aa9.54□□□□□ -0.88
COPB1-201ENST00000249923 XKR8Q9H6D3 395 aa9.54□□□□□ -0.88
COPB1-201ENST00000249923 NDUFB11Q9NX14 153 aa9.54□□□□□ -0.88
COPB1-201ENST00000249923 TESQ9UGI8 421 aaKnown RBP9.54□□□□□ -0.88
COPB1-201ENST00000249923 SPATA2Q9UM82 520 aa9.54□□□□□ -0.88
COPB1-201ENST00000249923 GPR55Q9Y2T6 319 aaPredicted RBP9.54□□□□□ -0.88
COPB1-201ENST00000249923 OR1A2Q9Y585 309 aa9.54□□□□□ -0.88
COPB1-201ENST00000249923 WDFY3Q8IZQ1 3526 aa9.53□□□□□ -0.88
COPB1-201ENST00000249923 FABP12A6NFH5 140 aa9.53□□□□□ -0.88
COPB1-201ENST00000249923 TEX46H3BTG2 121 aa9.53□□□□□ -0.88
COPB1-201ENST00000249923 PGRMC2O15173 223 aa9.53□□□□□ -0.88
COPB1-201ENST00000249923 H1F0P07305 194 aaKnown RBP9.53□□□□□ -0.88
COPB1-201ENST00000249923 UQCRC1P31930 480 aa9.53□□□□□ -0.88
COPB1-201ENST00000249923 XKP51811 444 aa9.53□□□□□ -0.88
COPB1-201ENST00000249923 CSNK1G2P78368 415 aa9.53□□□□□ -0.88
COPB1-201ENST00000249923 CDK3Q00526 305 aa9.53□□□□□ -0.88
COPB1-201ENST00000249923 RHAGQ02094 409 aa9.53□□□□□ -0.88
COPB1-201ENST00000249923 TARDBPQ13148 414 aaKnown RBP eCLIP9.53□□□□□ -0.88
COPB1-201ENST00000249923 ELAVL3Q14576 367 aaKnown RBP9.53□□□□□ -0.88
COPB1-201ENST00000249923 TMEM52BQ4KMG9 183 aa9.53□□□□□ -0.88
COPB1-201ENST00000249923 FNDC3BQ53EP0 1204 aaKnown RBP9.53□□□□□ -0.88
COPB1-201ENST00000249923 C2orf27AQ580R0 203 aa9.53□□□□□ -0.88
COPB1-201ENST00000249923 CEP78Q5JTW2 689 aa9.53□□□□□ -0.88
COPB1-201ENST00000249923 PHC2Q8IXK0 858 aa9.53□□□□□ -0.88
COPB1-201ENST00000249923 OR8H3Q8N146 312 aa9.53□□□□□ -0.88
COPB1-201ENST00000249923 OR8D4Q8NGM9 314 aa9.53□□□□□ -0.88
COPB1-201ENST00000249923 KLK6Q92876 244 aa9.53□□□□□ -0.88
COPB1-201ENST00000249923 RAD51AP1Q96B01 352 aa9.53□□□□□ -0.88
COPB1-201ENST00000249923 C17orf62Q9BQA9 187 aa9.53□□□□□ -0.88
COPB1-201ENST00000249923 TSSK6Q9BXA6 273 aa9.53□□□□□ -0.88
COPB1-201ENST00000249923 ASPNQ9BXN1 380 aa9.53□□□□□ -0.88
COPB1-201ENST00000249923 POLR2J2Q9GZM3 115 aaKnown RBP9.53□□□□□ -0.88
COPB1-201ENST00000249923 GPBP1L1Q9HC44 474 aaPredicted RBP9.53□□□□□ -0.88
COPB1-201ENST00000249923 SEMA3GQ9NS98 782 aa9.53□□□□□ -0.88
COPB1-201ENST00000249923 CLN6Q9NWW5 311 aa9.53□□□□□ -0.88
COPB1-201ENST00000249923 PLEKHM1Q9Y4G2 1056 aa9.53□□□□□ -0.88
COPB1-201ENST00000249923 INSL6Q9Y581 213 aa9.53□□□□□ -0.88
COPB1-201ENST00000249923 BTN3A3O00478 584 aa9.53□□□□□ -0.88
COPB1-201ENST00000249923 TOXO94900 526 aa9.53□□□□□ -0.88
COPB1-201ENST00000249923 CDRT1O95170 752 aa9.53□□□□□ -0.88
COPB1-201ENST00000249923 IFNA14P01570 189 aa9.53□□□□□ -0.88
COPB1-201ENST00000249923 PCCBP05166 539 aa9.53□□□□□ -0.88
COPB1-201ENST00000249923 EIF2S1P05198 315 aaKnown RBP9.53□□□□□ -0.88
COPB1-201ENST00000249923 OLR1P78380 273 aa9.53□□□□□ -0.88
COPB1-201ENST00000249923 FGL2Q14314 439 aa9.53□□□□□ -0.88
COPB1-201ENST00000249923 SPHARQ15513 63 aa9.53□□□□□ -0.88
COPB1-201ENST00000249923 WSCD2Q2TBF2 565 aa9.53□□□□□ -0.88
COPB1-201ENST00000249923 DCST1Q5T197 706 aa9.53□□□□□ -0.88
COPB1-201ENST00000249923 SHFQ7M4L6 423 aa9.53□□□□□ -0.88
COPB1-201ENST00000249923 DGLUCYQ7Z3D6 616 aa9.53□□□□□ -0.88
COPB1-201ENST00000249923 AMZ2Q86W34 360 aa9.53□□□□□ -0.88
COPB1-201ENST00000249923 AMIGO1Q86WK6 493 aa9.53□□□□□ -0.88
COPB1-201ENST00000249923 C17orf64Q86WR6 236 aa9.53□□□□□ -0.88
COPB1-201ENST00000249923 SYT14Q8NB59 555 aa9.53□□□□□ -0.88
COPB1-201ENST00000249923 C9orf43Q8TAL5 461 aaPredicted RBP9.53□□□□□ -0.88
COPB1-201ENST00000249923 KAT2AQ92830 837 aa9.53□□□□□ -0.88
COPB1-201ENST00000249923 SNAPC3Q92966 411 aa9.53□□□□□ -0.88
COPB1-201ENST00000249923 DPH7Q9BTV6 452 aa9.53□□□□□ -0.88
COPB1-201ENST00000249923 ZCCHC2Q9C0B9 1178 aaKnown RBP9.53□□□□□ -0.88
COPB1-201ENST00000249923 MIXL1Q9H2W2 232 aa9.53□□□□□ -0.88
COPB1-201ENST00000249923 EGLN3Q9H6Z9 239 aa9.53□□□□□ -0.88
COPB1-201ENST00000249923 MN1Q10571 1320 aaPredicted RBP9.53□□□□□ -0.88
COPB1-201ENST00000249923 ATG2BQ96BY7 2078 aa9.53□□□□□ -0.88
COPB1-201ENST00000249923 IGLON5A6NGN9 336 aa9.52□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms