RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 CHCHD6Q9BRQ6 235 aa14.84□□□□□ -0.03
LRFN1-201ENST00000248668 RAB11FIP5Q9BXF6 653 aa14.84□□□□□ -0.03
LRFN1-201ENST00000248668 UCK2Q9BZX2 261 aa14.84□□□□□ -0.03
LRFN1-201ENST00000248668 POLR2J3Q9H1A7 115 aaKnown RBP14.84□□□□□ -0.03
LRFN1-201ENST00000248668 TMEM74BQ9NUR3 256 aa14.84□□□□□ -0.03
LRFN1-201ENST00000248668 ADAM29Q9UKF5 820 aa14.84□□□□□ -0.03
LRFN1-201ENST00000248668 ENTPD6O75354 484 aa14.84□□□□□ -0.03
LRFN1-201ENST00000248668 CKMT1AP12532 417 aa14.84□□□□□ -0.03
LRFN1-201ENST00000248668 PVRP15151 417 aa14.84□□□□□ -0.03
LRFN1-201ENST00000248668 RAB15P59190 212 aa14.84□□□□□ -0.03
LRFN1-201ENST00000248668 DOC2BQ14184 412 aa14.84□□□□□ -0.03
LRFN1-201ENST00000248668 FAM209AQ5JX71 171 aa14.84□□□□□ -0.03
LRFN1-201ENST00000248668 C6orf132Q5T0Z8 1188 aa14.84□□□□□ -0.03
LRFN1-201ENST00000248668 MRGPRX1Q96LB2 322 aa14.84□□□□□ -0.03
LRFN1-201ENST00000248668 MARCH7Q9H992 704 aa14.84□□□□□ -0.03
LRFN1-201ENST00000248668 KCND3Q9UK17 655 aa14.84□□□□□ -0.03
LRFN1-201ENST00000248668 COLEC10Q9Y6Z7 277 aa14.84□□□□□ -0.03
LRFN1-201ENST00000248668 TDRD6O60522 2096 aaKnown RBP14.84□□□□□ -0.03
LRFN1-201ENST00000248668 GUCY1B2O75343 617 aa14.84□□□□□ -0.03
LRFN1-201ENST00000248668 APOL3O95236 402 aa14.84□□□□□ -0.03
LRFN1-201ENST00000248668 SIM1P81133 766 aaPredicted RBP14.84□□□□□ -0.03
LRFN1-201ENST00000248668 TMEM35AQ53FP2 167 aa14.84□□□□□ -0.03
LRFN1-201ENST00000248668 PODNL1Q6PEZ8 512 aa14.84□□□□□ -0.03
LRFN1-201ENST00000248668 TMEM92Q6UXU6 159 aa14.84□□□□□ -0.03
LRFN1-201ENST00000248668 MTSS1LQ765P7 747 aa14.84□□□□□ -0.03
LRFN1-201ENST00000248668 VN1R4Q7Z5H5 301 aa14.84□□□□□ -0.03
LRFN1-201ENST00000248668 IQCHQ86VS3 1027 aa14.84□□□□□ -0.03
LRFN1-201ENST00000248668 SLC30A8Q8IWU4 369 aa14.84□□□□□ -0.03
LRFN1-201ENST00000248668 SLC38A4Q969I6 547 aa14.84□□□□□ -0.03
LRFN1-201ENST00000248668 FNDC11Q9BVV2 318 aa14.84□□□□□ -0.03
LRFN1-201ENST00000248668 DCSTAMPQ9H295 470 aa14.84□□□□□ -0.03
LRFN1-201ENST00000248668 PIAS3Q9Y6X2 628 aa14.84□□□□□ -0.03
LRFN1-201ENST00000248668 TLR4O00206 839 aa14.83□□□□□ -0.04
LRFN1-201ENST00000248668 KPNA4O00629 521 aaPredicted RBP14.83□□□□□ -0.04
LRFN1-201ENST00000248668 TBX19O60806 448 aa14.83□□□□□ -0.04
LRFN1-201ENST00000248668 EPPINO95925 133 aa14.83□□□□□ -0.04
LRFN1-201ENST00000248668 UGT2B15P54855 530 aa14.83□□□□□ -0.04
LRFN1-201ENST00000248668 MLLT1Q03111 559 aaPredicted RBP14.83□□□□□ -0.04
LRFN1-201ENST00000248668 DGUOKQ16854 277 aa14.83□□□□□ -0.04
LRFN1-201ENST00000248668 ARMCX4Q5H9R4 360 aa14.83□□□□□ -0.04
LRFN1-201ENST00000248668 VRK2Q86Y07 508 aa14.83□□□□□ -0.04
LRFN1-201ENST00000248668 KRT73Q86Y46 540 aa14.83□□□□□ -0.04
LRFN1-201ENST00000248668 RPLP0P6Q8NHW5 317 aa14.83□□□□□ -0.04
LRFN1-201ENST00000248668 ARSGQ96EG1 525 aa14.83□□□□□ -0.04
LRFN1-201ENST00000248668 BMFQ96LC9 184 aa14.83□□□□□ -0.04
LRFN1-201ENST00000248668 SLC7A5P2Q9GIP4 190 aa14.83□□□□□ -0.04
LRFN1-201ENST00000248668 A4GNTQ9UNA3 340 aa14.83□□□□□ -0.04
LRFN1-201ENST00000248668 NTNG1Q9Y2I2 539 aa14.83□□□□□ -0.04
LRFN1-201ENST00000248668 WBP11Q9Y2W2 641 aaKnown RBP14.83□□□□□ -0.04
LRFN1-201ENST00000248668 ZAR1LA6NP61 321 aa14.83□□□□□ -0.04
LRFN1-201ENST00000248668 CLDN25C9JDP6 229 aa14.83□□□□□ -0.04
LRFN1-201ENST00000248668 CSNK2A2P19784 350 aaPredicted RBP14.83□□□□□ -0.04
LRFN1-201ENST00000248668 KHKP50053 298 aa14.83□□□□□ -0.04
LRFN1-201ENST00000248668 XKP51811 444 aa14.83□□□□□ -0.04
LRFN1-201ENST00000248668 UBE2UQ5VVX9 321 aa14.83□□□□□ -0.04
LRFN1-201ENST00000248668 PGBD2Q6P3X8 592 aa14.83□□□□□ -0.04
LRFN1-201ENST00000248668 TBC1D19Q8N5T2 526 aa14.83□□□□□ -0.04
LRFN1-201ENST00000248668 TCEANCQ8N8B7 351 aa14.83□□□□□ -0.04
LRFN1-201ENST00000248668 WDR36Q8NI36 951 aaKnown RBP14.83□□□□□ -0.04
LRFN1-201ENST00000248668 DYNC2LI1Q8TCX1 351 aa14.83□□□□□ -0.04
LRFN1-201ENST00000248668 HMGB4Q8WW32 186 aa14.83□□□□□ -0.04
LRFN1-201ENST00000248668 GABRG3Q99928 467 aa14.83□□□□□ -0.04
LRFN1-201ENST00000248668 TVP23BQ9NYZ1 205 aa14.83□□□□□ -0.04
LRFN1-201ENST00000248668 DDX5P17844 614 aaKnown RBP14.82□□□□□ -0.04
LRFN1-201ENST00000248668 NDUFV2P19404 249 aa14.82□□□□□ -0.04
LRFN1-201ENST00000248668 CHRNEQ04844 493 aa14.82□□□□□ -0.04
LRFN1-201ENST00000248668 SELENBP1Q13228 472 aa14.82□□□□□ -0.04
LRFN1-201ENST00000248668 DENND6BQ8NEG7 585 aa14.82□□□□□ -0.04
LRFN1-201ENST00000248668 NUP43Q8NFH3 380 aa14.82□□□□□ -0.04
LRFN1-201ENST00000248668 TRUB1Q8WWH5 349 aaKnown RBP14.82□□□□□ -0.04
LRFN1-201ENST00000248668 PITHD1Q9GZP4 211 aaPredicted RBP14.82□□□□□ -0.04
LRFN1-201ENST00000248668 C6orf62Q9GZU0 229 aaPredicted RBP14.82□□□□□ -0.04
LRFN1-201ENST00000248668 NECTIN3Q9NQS3 549 aa14.82□□□□□ -0.04
LRFN1-201ENST00000248668 TAS2R7Q9NYW3 318 aa14.82□□□□□ -0.04
LRFN1-201ENST00000248668 NCKAP1Q9Y2A7 1128 aa14.82□□□□□ -0.04
LRFN1-201ENST00000248668 CLDN24A6NM45 220 aa14.82□□□□□ -0.04
LRFN1-201ENST00000248668 P2RX6O15547 441 aa14.82□□□□□ -0.04
LRFN1-201ENST00000248668 F3P13726 295 aa14.82□□□□□ -0.04
LRFN1-201ENST00000248668 AVPR1BP47901 424 aa14.82□□□□□ -0.04
LRFN1-201ENST00000248668 OXA1LQ15070 435 aa14.82□□□□□ -0.04
LRFN1-201ENST00000248668 SLC48A1Q6P1K1 146 aa14.82□□□□□ -0.04
LRFN1-201ENST00000248668 SLC9A6Q92581 669 aa14.82□□□□□ -0.04
LRFN1-201ENST00000248668 GPA33Q99795 319 aa14.82□□□□□ -0.04
LRFN1-201ENST00000248668 LMAN2LQ9H0V9 348 aa14.82□□□□□ -0.04
LRFN1-201ENST00000248668 TCEAL2Q9H3H9 227 aaPredicted RBP14.82□□□□□ -0.04
LRFN1-201ENST00000248668 CLN6Q9NWW5 311 aa14.82□□□□□ -0.04
LRFN1-201ENST00000248668 REV1Q9UBZ9 1251 aa14.82□□□□□ -0.04
LRFN1-201ENST00000248668 GPR55Q9Y2T6 319 aaPredicted RBP14.82□□□□□ -0.04
LRFN1-201ENST00000248668 PRR19A6NJB7 356 aa14.82□□□□□ -0.04
LRFN1-201ENST00000248668 CPSF4LA6NMK7 179 aaKnown RBP14.82□□□□□ -0.04
LRFN1-201ENST00000248668 CTSVO60911 334 aa14.82□□□□□ -0.04
LRFN1-201ENST00000248668 BMP4P12644 408 aa14.82□□□□□ -0.04
LRFN1-201ENST00000248668 TBCEQ15813 527 aaPredicted RBP14.82□□□□□ -0.04
LRFN1-201ENST00000248668 MRM1Q6IN84 353 aaKnown RBP14.82□□□□□ -0.04
LRFN1-201ENST00000248668 USP43Q70EL4 1123 aa14.82□□□□□ -0.04
LRFN1-201ENST00000248668 NATD1Q8N6N6 113 aa14.82□□□□□ -0.04
LRFN1-201ENST00000248668 OR4K5Q8NGD3 323 aa14.82□□□□□ -0.04
LRFN1-201ENST00000248668 S1PR5Q9H228 398 aa14.82□□□□□ -0.04
LRFN1-201ENST00000248668 RERGLQ9H628 205 aa14.82□□□□□ -0.04
LRFN1-201ENST00000248668 CLEC2DQ9UHP7 191 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms