RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 LAX1Q8IWV1 398 aa13.55□□□□□ -0.24
HIF3A-202ENST00000244303 PHC2Q8IXK0 858 aa13.55□□□□□ -0.24
HIF3A-202ENST00000244303 OR8H2Q8N162 312 aa13.55□□□□□ -0.24
HIF3A-202ENST00000244303 IL17RCQ8NAC3 791 aa13.55□□□□□ -0.24
HIF3A-202ENST00000244303 BBS10Q8TAM1 723 aa13.55□□□□□ -0.24
HIF3A-202ENST00000244303 LRR1Q96L50 414 aa13.55□□□□□ -0.24
HIF3A-202ENST00000244303 NDEL1Q9GZM8 345 aa13.55□□□□□ -0.24
HIF3A-202ENST00000244303 QRSL1Q9H0R6 528 aaKnown RBP13.55□□□□□ -0.24
HIF3A-202ENST00000244303 TP63Q9H3D4 680 aaPredicted RBP13.55□□□□□ -0.24
HIF3A-202ENST00000244303 NEK6Q9HC98 313 aa13.55□□□□□ -0.24
HIF3A-202ENST00000244303 IMP3Q9NV31 184 aaKnown RBP13.55□□□□□ -0.24
HIF3A-202ENST00000244303 ZSCAN32Q9NX65 697 aa13.55□□□□□ -0.24
HIF3A-202ENST00000244303 YBX2Q9Y2T7 364 aaKnown RBP13.55□□□□□ -0.24
HIF3A-202ENST00000244303 H3BQ06 376 aaPredicted RBP13.55□□□□□ -0.24
HIF3A-202ENST00000244303 PGRMC2O15173 223 aa13.55□□□□□ -0.24
HIF3A-202ENST00000244303 KAT7O95251 611 aa13.55□□□□□ -0.24
HIF3A-202ENST00000244303 RAB36O95755 333 aa13.55□□□□□ -0.24
HIF3A-202ENST00000244303 LGI1O95970 557 aa13.55□□□□□ -0.24
HIF3A-202ENST00000244303 HMGN2P05204 90 aaKnown RBP13.55□□□□□ -0.24
HIF3A-202ENST00000244303 ETV5P41161 510 aa13.55□□□□□ -0.24
HIF3A-202ENST00000244303 BCL6P41182 706 aa13.55□□□□□ -0.24
HIF3A-202ENST00000244303 GIPRP48546 466 aa13.55□□□□□ -0.24
HIF3A-202ENST00000244303 ETV1P50549 477 aa13.55□□□□□ -0.24
HIF3A-202ENST00000244303 MXD1Q05195 221 aa13.55□□□□□ -0.24
HIF3A-202ENST00000244303 DUSP2Q05923 314 aa13.55□□□□□ -0.24
HIF3A-202ENST00000244303 ZMAT1Q5H9K5 638 aa13.55□□□□□ -0.24
HIF3A-202ENST00000244303 C1orf94Q6P1W5 598 aa13.55□□□□□ -0.24
HIF3A-202ENST00000244303 USP30Q70CQ3 517 aa13.55□□□□□ -0.24
HIF3A-202ENST00000244303 RAB42Q8N4Z0 105 aa13.55□□□□□ -0.24
HIF3A-202ENST00000244303 OR8K5Q8NH50 307 aa13.55□□□□□ -0.24
HIF3A-202ENST00000244303 PRRC1Q96M27 445 aa13.55□□□□□ -0.24
HIF3A-202ENST00000244303 ZNF582Q96NG8 517 aaPredicted RBP13.55□□□□□ -0.24
HIF3A-202ENST00000244303 CAMK1GQ96NX5 476 aa13.55□□□□□ -0.24
HIF3A-202ENST00000244303 FAIM2Q9BWQ8 316 aa13.55□□□□□ -0.24
HIF3A-202ENST00000244303 PLA2G12AQ9BZM1 189 aa13.55□□□□□ -0.24
HIF3A-202ENST00000244303 PLA2G2FQ9BZM2 168 aa13.55□□□□□ -0.24
HIF3A-202ENST00000244303 IGFLR1Q9H665 355 aa13.55□□□□□ -0.24
HIF3A-202ENST00000244303 BCL2L10Q9HD36 194 aa13.55□□□□□ -0.24
HIF3A-202ENST00000244303 FBXW2Q9UKT8 454 aa13.55□□□□□ -0.24
HIF3A-202ENST00000244303 ACSL5Q9ULC5 683 aa13.55□□□□□ -0.24
HIF3A-202ENST00000244303 TBC1D24Q9ULP9 559 aa13.55□□□□□ -0.24
HIF3A-202ENST00000244303 SSR3Q9UNL2 185 aa13.55□□□□□ -0.24
HIF3A-202ENST00000244303 DIMT1Q9UNQ2 313 aaKnown RBP13.55□□□□□ -0.24
HIF3A-202ENST00000244303 TRAPPC4Q9Y296 219 aa13.55□□□□□ -0.24
HIF3A-202ENST00000244303 V9GYH0 126 aa13.55□□□□□ -0.24
HIF3A-202ENST00000244303 MID1O15344 667 aa13.54□□□□□ -0.24
HIF3A-202ENST00000244303 ERI3O43414 337 aaKnown RBP13.54□□□□□ -0.24
HIF3A-202ENST00000244303 WASP42768 502 aa13.54□□□□□ -0.24
HIF3A-202ENST00000244303 RAB28P51157 221 aa13.54□□□□□ -0.24
HIF3A-202ENST00000244303 CDK5Q00535 292 aa13.54□□□□□ -0.24
HIF3A-202ENST00000244303 SLAMF1Q13291 335 aa13.54□□□□□ -0.24
HIF3A-202ENST00000244303 SLC9A5Q14940 896 aa13.54□□□□□ -0.24
HIF3A-202ENST00000244303 NDUFA9Q16795 377 aa13.54□□□□□ -0.24
HIF3A-202ENST00000244303 AGBL4Q5VU57 503 aa13.54□□□□□ -0.24
HIF3A-202ENST00000244303 KIF18BQ86Y91 864 aa13.54□□□□□ -0.24
HIF3A-202ENST00000244303 CCDC116Q8IYX3 515 aa13.54□□□□□ -0.24
HIF3A-202ENST00000244303 PSD4Q8NDX1 1056 aa13.54□□□□□ -0.24
HIF3A-202ENST00000244303 IL17RDQ8NFM7 739 aa13.54□□□□□ -0.24
HIF3A-202ENST00000244303 OR9Q1Q8NGQ5 310 aa13.54□□□□□ -0.24
HIF3A-202ENST00000244303 SUN3Q8TAQ9 357 aa13.54□□□□□ -0.24
HIF3A-202ENST00000244303 OR2A14Q96R47 310 aa13.54□□□□□ -0.24
HIF3A-202ENST00000244303 SPATA5L1Q9BVQ7 753 aa13.54□□□□□ -0.24
HIF3A-202ENST00000244303 PRR14Q9BWN1 585 aa13.54□□□□□ -0.24
HIF3A-202ENST00000244303 TEX101Q9BY14 249 aa13.54□□□□□ -0.24
HIF3A-202ENST00000244303 EGLN3Q9H6Z9 239 aa13.54□□□□□ -0.24
HIF3A-202ENST00000244303 WDR26Q9H7D7 661 aa13.54□□□□□ -0.24
HIF3A-202ENST00000244303 TESQ9UGI8 421 aaKnown RBP13.54□□□□□ -0.24
HIF3A-202ENST00000244303 KCNK6Q9Y257 313 aa13.54□□□□□ -0.24
HIF3A-202ENST00000244303 CARD8Q9Y2G2 431 aa13.54□□□□□ -0.24
HIF3A-202ENST00000244303 A0A1W2PR48 441 aa13.53□□□□□ -0.24
HIF3A-202ENST00000244303 A0A1W2PS29 197 aa13.53□□□□□ -0.24
HIF3A-202ENST00000244303 APOL3O95236 402 aa13.53□□□□□ -0.24
HIF3A-202ENST00000244303 C8orf89P0DMQ9 161 aa13.53□□□□□ -0.24
HIF3A-202ENST00000244303 MAN2A2P49641 1150 aa13.53□□□□□ -0.24
HIF3A-202ENST00000244303 PSPHP78330 225 aa13.53□□□□□ -0.24
HIF3A-202ENST00000244303 IFITM2Q01629 132 aa13.53□□□□□ -0.24
HIF3A-202ENST00000244303 HYAL2Q12891 473 aa13.53□□□□□ -0.24
HIF3A-202ENST00000244303 IRF4Q15306 451 aa13.53□□□□□ -0.24
HIF3A-202ENST00000244303 SNAPC1Q16533 368 aa13.53□□□□□ -0.24
HIF3A-202ENST00000244303 FLYWCH1Q4VC44 716 aa13.53□□□□□ -0.24
HIF3A-202ENST00000244303 GPAT3Q53EU6 434 aa13.53□□□□□ -0.24
HIF3A-202ENST00000244303 ATAT1Q5SQI0 421 aa13.53□□□□□ -0.24
HIF3A-202ENST00000244303 LINC00471Q8N535 108 aa13.53□□□□□ -0.24
HIF3A-202ENST00000244303 C17orf50Q8WW18 174 aa13.53□□□□□ -0.24
HIF3A-202ENST00000244303 FGF11Q92914 225 aa13.53□□□□□ -0.24
HIF3A-202ENST00000244303 CHFRQ96EP1 664 aa13.53□□□□□ -0.24
HIF3A-202ENST00000244303 CNRIP1Q96F85 164 aaPredicted RBP13.53□□□□□ -0.24
HIF3A-202ENST00000244303 C16orf58Q96GQ5 468 aa13.53□□□□□ -0.24
HIF3A-202ENST00000244303 TXNL4BQ9NX01 149 aaKnown RBP13.53□□□□□ -0.24
HIF3A-202ENST00000244303 MUTYHQ9UIF7 546 aa13.53□□□□□ -0.24
HIF3A-202ENST00000244303 ATG4BQ9Y4P1 393 aa13.53□□□□□ -0.24
HIF3A-202ENST00000244303 NOX1Q9Y5S8 564 aa13.53□□□□□ -0.24
HIF3A-202ENST00000244303 KCNE3Q9Y6H6 103 aa13.53□□□□□ -0.24
HIF3A-202ENST00000244303 ATG2BQ96BY7 2078 aa13.53□□□□□ -0.24
HIF3A-202ENST00000244303 PLD2O14939 933 aa13.53□□□□□ -0.24
HIF3A-202ENST00000244303 CDRT1O95170 752 aa13.53□□□□□ -0.24
HIF3A-202ENST00000244303 CHRM5P08912 532 aaPredicted RBP13.53□□□□□ -0.24
HIF3A-202ENST00000244303 EFNB1P98172 346 aa13.53□□□□□ -0.24
HIF3A-202ENST00000244303 RUNX1T1Q06455 604 aa13.53□□□□□ -0.24
HIF3A-202ENST00000244303 ZIC1Q15915 447 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms