RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 GIMAP5Q96F15 307 aa15.2■□□□□ 0.02
UBE3D-201ENST00000237186 OR7D2Q96RA2 312 aa15.2■□□□□ 0.02
UBE3D-201ENST00000237186 MGLLQ99685 303 aa15.2■□□□□ 0.02
UBE3D-201ENST00000237186 POLDIP3Q9BY77 421 aaKnown RBP15.2■□□□□ 0.02
UBE3D-201ENST00000237186 RACGAP1Q9H0H5 632 aa15.2■□□□□ 0.02
UBE3D-201ENST00000237186 SLC38A1Q9H2H9 487 aa15.2■□□□□ 0.02
UBE3D-201ENST00000237186 DSN1Q9H410 356 aa15.2■□□□□ 0.02
UBE3D-201ENST00000237186 C11orf16Q9NQ32 467 aa15.2■□□□□ 0.02
UBE3D-201ENST00000237186 RHBDL2Q9NX52 303 aa15.2■□□□□ 0.02
UBE3D-201ENST00000237186 GIN1Q9NXP7 522 aa15.2■□□□□ 0.02
UBE3D-201ENST00000237186 CCDC59Q9P031 241 aaKnown RBP15.2■□□□□ 0.02
UBE3D-201ENST00000237186 MKLN1Q9UL63 735 aa15.2■□□□□ 0.02
UBE3D-201ENST00000237186 RPL36Q9Y3U8 105 aaKnown RBP15.2■□□□□ 0.02
UBE3D-201ENST00000237186 KCNE3Q9Y6H6 103 aa15.2■□□□□ 0.02
UBE3D-201ENST00000237186 A0A1W2PS29 197 aa15.2■□□□□ 0.02
UBE3D-201ENST00000237186 H3BN98 237 aa15.2■□□□□ 0.02
UBE3D-201ENST00000237186 C8orf89P0DMQ9 161 aa15.2■□□□□ 0.02
UBE3D-201ENST00000237186 GSTM3P21266 225 aa15.2■□□□□ 0.02
UBE3D-201ENST00000237186 MMP11P24347 488 aa15.2■□□□□ 0.02
UBE3D-201ENST00000237186 AK4P27144 223 aaPredicted RBP15.2■□□□□ 0.02
UBE3D-201ENST00000237186 CD40LGP29965 261 aa15.2■□□□□ 0.02
UBE3D-201ENST00000237186 PPP5CP53041 499 aa15.2■□□□□ 0.02
UBE3D-201ENST00000237186 MRPS21P82921 87 aaKnown RBP15.2■□□□□ 0.02
UBE3D-201ENST00000237186 FOXD4Q12950 439 aaPredicted RBP15.2■□□□□ 0.02
UBE3D-201ENST00000237186 HTR4Q13639 388 aa15.2■□□□□ 0.02
UBE3D-201ENST00000237186 TIMM50Q3ZCQ8 353 aa15.2■□□□□ 0.02
UBE3D-201ENST00000237186 GPAT3Q53EU6 434 aa15.2■□□□□ 0.02
UBE3D-201ENST00000237186 MFSD4BQ5TF39 518 aa15.2■□□□□ 0.02
UBE3D-201ENST00000237186 NIPAL1Q6NVV3 410 aa15.2■□□□□ 0.02
UBE3D-201ENST00000237186 ATCAYQ86WG3 371 aa15.2■□□□□ 0.02
UBE3D-201ENST00000237186 GJD3Q8N144 294 aa15.2■□□□□ 0.02
UBE3D-201ENST00000237186 AMER2Q8N7J2 671 aa15.2■□□□□ 0.02
UBE3D-201ENST00000237186 JPH3Q8WXH2 748 aaPredicted RBP15.2■□□□□ 0.02
UBE3D-201ENST00000237186 KLHL6Q8WZ60 621 aa15.2■□□□□ 0.02
UBE3D-201ENST00000237186 FGF11Q92914 225 aa15.2■□□□□ 0.02
UBE3D-201ENST00000237186 OR5M11Q96RB7 305 aa15.2■□□□□ 0.02
UBE3D-201ENST00000237186 IL4I1Q96RQ9 567 aa15.2■□□□□ 0.02
UBE3D-201ENST00000237186 ARHGDIGQ99819 225 aa15.2■□□□□ 0.02
UBE3D-201ENST00000237186 YIPF4Q9BSR8 244 aa15.2■□□□□ 0.02
UBE3D-201ENST00000237186 TAPBPLQ9BX59 468 aa15.2■□□□□ 0.02
UBE3D-201ENST00000237186 SRMSQ9H3Y6 488 aa15.2■□□□□ 0.02
UBE3D-201ENST00000237186 LSM2Q9Y333 95 aaKnown RBP15.2■□□□□ 0.02
UBE3D-201ENST00000237186 DOCK9Q9BZ29 2069 aa15.19■□□□□ 0.02
UBE3D-201ENST00000237186 SCAMP1O15126 338 aa15.19■□□□□ 0.02
UBE3D-201ENST00000237186 SOX14O95416 240 aa15.19■□□□□ 0.02
UBE3D-201ENST00000237186 NR2F6P10588 404 aa15.19■□□□□ 0.02
UBE3D-201ENST00000237186 ALPPL2P10696 532 aa15.19■□□□□ 0.02
UBE3D-201ENST00000237186 CSTF2P33240 577 aaKnown RBP eCLIP15.19■□□□□ 0.02
UBE3D-201ENST00000237186 BUD31P41223 144 aaPredicted RBP15.19■□□□□ 0.02
UBE3D-201ENST00000237186 MC3RP41968 323 aa15.19■□□□□ 0.02
UBE3D-201ENST00000237186 GIPRP48546 466 aa15.19■□□□□ 0.02
UBE3D-201ENST00000237186 CDK5Q00535 292 aa15.19■□□□□ 0.02
UBE3D-201ENST00000237186 RELAQ04206 551 aa15.19■□□□□ 0.02
UBE3D-201ENST00000237186 TPRG1LQ5T0D9 272 aa15.19■□□□□ 0.02
UBE3D-201ENST00000237186 HEPHL1Q6MZM0 1159 aa15.19■□□□□ 0.02
UBE3D-201ENST00000237186 OLIG3Q7RTU3 272 aa15.19■□□□□ 0.02
UBE3D-201ENST00000237186 KCT2Q8NC54 265 aa15.19■□□□□ 0.02
UBE3D-201ENST00000237186 OR9A2Q8NGT5 310 aa15.19■□□□□ 0.02
UBE3D-201ENST00000237186 TMEM80Q96HE8 168 aa15.19■□□□□ 0.02
UBE3D-201ENST00000237186 MRGPRX1Q96LB2 322 aa15.19■□□□□ 0.02
UBE3D-201ENST00000237186 OR2A5Q96R48 311 aa15.19■□□□□ 0.02
UBE3D-201ENST00000237186 ACTRT3Q9BYD9 372 aa15.19■□□□□ 0.02
UBE3D-201ENST00000237186 OR51E2Q9H255 320 aa15.19■□□□□ 0.02
UBE3D-201ENST00000237186 ANKRD19PQ9H560 264 aa15.19■□□□□ 0.02
UBE3D-201ENST00000237186 KCMF1Q9P0J7 381 aa15.19■□□□□ 0.02
UBE3D-201ENST00000237186 FUOMA2VDF0 154 aa15.18■□□□□ 0.02
UBE3D-201ENST00000237186 DUXAA6NLW8 204 aa15.18■□□□□ 0.02
UBE3D-201ENST00000237186 TAF4O00268 1085 aa15.18■□□□□ 0.02
UBE3D-201ENST00000237186 CCRL2O00421 344 aa15.18■□□□□ 0.02
UBE3D-201ENST00000237186 DSCR3O14972 297 aa15.18■□□□□ 0.02
UBE3D-201ENST00000237186 SCG5P05408 212 aa15.18■□□□□ 0.02
UBE3D-201ENST00000237186 ACADMP11310 421 aa15.18■□□□□ 0.02
UBE3D-201ENST00000237186 DRD1P21728 446 aa15.18■□□□□ 0.02
UBE3D-201ENST00000237186 PTGER1P34995 402 aa15.18■□□□□ 0.02
UBE3D-201ENST00000237186 DGKEP52429 567 aa15.18■□□□□ 0.02
UBE3D-201ENST00000237186 IFITM3Q01628 133 aa15.18■□□□□ 0.02
UBE3D-201ENST00000237186 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.18■□□□□ 0.02
UBE3D-201ENST00000237186 ATP1A4Q13733 1029 aa15.18■□□□□ 0.02
UBE3D-201ENST00000237186 INAVAQ3KP66 663 aa15.18■□□□□ 0.02
UBE3D-201ENST00000237186 ZNF311Q5JNZ3 666 aa15.18■□□□□ 0.02
UBE3D-201ENST00000237186 ZFPM2Q8WW38 1151 aa15.18■□□□□ 0.02
UBE3D-201ENST00000237186 OR2A14Q96R47 310 aa15.18■□□□□ 0.02
UBE3D-201ENST00000237186 SERINC2Q96SA4 455 aa15.18■□□□□ 0.02
UBE3D-201ENST00000237186 CDADC1Q9BWV3 514 aa15.18■□□□□ 0.02
UBE3D-201ENST00000237186 DNAAF2Q9NVR5 837 aaKnown RBP15.18■□□□□ 0.02
UBE3D-201ENST00000237186 TRNAU1APQ9NX07 287 aaKnown RBP15.18■□□□□ 0.02
UBE3D-201ENST00000237186 ANKMY1Q9P2S6 941 aa15.18■□□□□ 0.02
UBE3D-201ENST00000237186 PHF11Q9UIL8 331 aa15.18■□□□□ 0.02
UBE3D-201ENST00000237186 C10orf142B7Z368 130 aa15.18■□□□□ 0.02
UBE3D-201ENST00000237186 AGR2O95994 175 aa15.18■□□□□ 0.02
UBE3D-201ENST00000237186 SLC35G6P0C7Q6 338 aa15.18■□□□□ 0.02
UBE3D-201ENST00000237186 TNNI3P19429 210 aa15.18■□□□□ 0.02
UBE3D-201ENST00000237186 HNRNPA2B1P22626 353 aaKnown RBP15.18■□□□□ 0.02
UBE3D-201ENST00000237186 PRKAR1BP31321 381 aa15.18■□□□□ 0.02
UBE3D-201ENST00000237186 ACTR1BP42025 376 aa15.18■□□□□ 0.02
UBE3D-201ENST00000237186 PCYT1AP49585 367 aa15.18■□□□□ 0.02
UBE3D-201ENST00000237186 ACTR1AP61163 376 aa15.18■□□□□ 0.02
UBE3D-201ENST00000237186 YPEL5P62699 121 aa15.18■□□□□ 0.02
UBE3D-201ENST00000237186 TNFRSF17Q02223 184 aa15.18■□□□□ 0.02
UBE3D-201ENST00000237186 CHRNEQ04844 493 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms