RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 KDM8Q8N371 416 aa10.61□□□□□ -0.71
MSH6-201ENST00000234420 OR52H1Q8NGJ2 320 aa10.61□□□□□ -0.71
MSH6-201ENST00000234420 HS6ST2Q96MM7 605 aa10.61□□□□□ -0.71
MSH6-201ENST00000234420 CD180Q99467 661 aa10.61□□□□□ -0.71
MSH6-201ENST00000234420 HDHD5Q9BXW7 423 aa10.61□□□□□ -0.71
MSH6-201ENST00000234420 APOBEC3BQ9UH17 382 aaKnown RBP10.61□□□□□ -0.71
MSH6-201ENST00000234420 EXOSC1Q9Y3B2 195 aaKnown RBP10.61□□□□□ -0.71
MSH6-201ENST00000234420 RIPK3Q9Y572 518 aa10.61□□□□□ -0.71
MSH6-201ENST00000234420 A0A1B0GVM2 712 aa10.61□□□□□ -0.71
MSH6-201ENST00000234420 DSTNP60981 165 aa10.61□□□□□ -0.71
MSH6-201ENST00000234420 TAGLNQ01995 201 aaKnown RBP10.61□□□□□ -0.71
MSH6-201ENST00000234420 NFATC3Q12968 1075 aa10.61□□□□□ -0.71
MSH6-201ENST00000234420 TMEM201Q5SNT2 666 aa10.61□□□□□ -0.71
MSH6-201ENST00000234420 OR1J4Q8NGS1 313 aa10.61□□□□□ -0.71
MSH6-201ENST00000234420 PITX2Q99697 317 aa10.61□□□□□ -0.71
MSH6-201ENST00000234420 RCBTB2O95199 551 aa10.61□□□□□ -0.71
MSH6-201ENST00000234420 CA3P07451 260 aa10.61□□□□□ -0.71
MSH6-201ENST00000234420 GNB1P62873 340 aa10.61□□□□□ -0.71
MSH6-201ENST00000234420 GLT8D1Q68CQ7 371 aa10.61□□□□□ -0.71
MSH6-201ENST00000234420 BAGE3Q86Y29 109 aa10.61□□□□□ -0.71
MSH6-201ENST00000234420 BAGE2Q86Y30 109 aa10.61□□□□□ -0.71
MSH6-201ENST00000234420 OR2A12Q8NGT7 310 aa10.61□□□□□ -0.71
MSH6-201ENST00000234420 ZNF75AQ96N20 296 aa10.61□□□□□ -0.71
MSH6-201ENST00000234420 CGREF1Q99674 301 aa10.61□□□□□ -0.71
MSH6-201ENST00000234420 PLA2G12BQ9BX93 195 aa10.61□□□□□ -0.71
MSH6-201ENST00000234420 TRAV20A0A0B4J274 112 aa10.6□□□□□ -0.71
MSH6-201ENST00000234420 MYBPHLA2RUH7 354 aa10.6□□□□□ -0.71
MSH6-201ENST00000234420 TGOLN2O43493 480 aa10.6□□□□□ -0.71
MSH6-201ENST00000234420 ANGPTL7O43827 346 aa10.6□□□□□ -0.71
MSH6-201ENST00000234420 CREG1O75629 220 aa10.6□□□□□ -0.71
MSH6-201ENST00000234420 CDK2P24941 298 aa10.6□□□□□ -0.71
MSH6-201ENST00000234420 SSTR4P31391 388 aa10.6□□□□□ -0.71
MSH6-201ENST00000234420 GGT5P36269 586 aa10.6□□□□□ -0.71
MSH6-201ENST00000234420 PTPRCAPQ14761 206 aa10.6□□□□□ -0.71
MSH6-201ENST00000234420 YIF1BQ5BJH7 314 aa10.6□□□□□ -0.71
MSH6-201ENST00000234420 CAMKVQ8NCB2 501 aa10.6□□□□□ -0.71
MSH6-201ENST00000234420 SORCS1Q8WY21 1168 aa10.6□□□□□ -0.71
MSH6-201ENST00000234420 NELL2Q99435 816 aa10.6□□□□□ -0.71
MSH6-201ENST00000234420 ULBP3Q9BZM4 244 aa10.6□□□□□ -0.71
MSH6-201ENST00000234420 POLHQ9Y253 713 aa10.6□□□□□ -0.71
MSH6-201ENST00000234420 PLSCR5A0PG75 271 aa10.6□□□□□ -0.71
MSH6-201ENST00000234420 SHISA7A6NL88 538 aa10.6□□□□□ -0.71
MSH6-201ENST00000234420 SLC1A7O00341 560 aa10.6□□□□□ -0.71
MSH6-201ENST00000234420 UPK1BO75841 260 aa10.6□□□□□ -0.71
MSH6-201ENST00000234420 CD3GP09693 182 aa10.6□□□□□ -0.71
MSH6-201ENST00000234420 BMP8BP34820 402 aa10.6□□□□□ -0.71
MSH6-201ENST00000234420 EIF2DP41214 584 aaKnown RBP10.6□□□□□ -0.71
MSH6-201ENST00000234420 ARSFP54793 590 aa10.6□□□□□ -0.71
MSH6-201ENST00000234420 BMP8AQ7Z5Y6 402 aa10.6□□□□□ -0.71
MSH6-201ENST00000234420 A2ML1A8K2U0 1454 aa10.6□□□□□ -0.71
MSH6-201ENST00000234420 A0A1W2PS29 197 aa10.6□□□□□ -0.71
MSH6-201ENST00000234420 C20orf202A1L168 122 aa10.6□□□□□ -0.71
MSH6-201ENST00000234420 TP53P04637 393 aaPredicted RBP10.6□□□□□ -0.71
MSH6-201ENST00000234420 DPYSL2Q16555 572 aa10.6□□□□□ -0.71
MSH6-201ENST00000234420 ZNF679Q8IYX0 411 aa10.6□□□□□ -0.71
MSH6-201ENST00000234420 OR4C5Q8NGB2 326 aa10.6□□□□□ -0.71
MSH6-201ENST00000234420 RGMAQ96B86 450 aa10.6□□□□□ -0.71
MSH6-201ENST00000234420 A0A1W2PQL4 384 aaPredicted RBP10.6□□□□□ -0.71
MSH6-201ENST00000234420 IGLON5A6NGN9 336 aa10.6□□□□□ -0.71
MSH6-201ENST00000234420 HEPACAM2A8MVW5 462 aa10.6□□□□□ -0.71
MSH6-201ENST00000234420 TMEM233B4DJY2 109 aa10.6□□□□□ -0.71
MSH6-201ENST00000234420 LYRM1O43325 122 aa10.6□□□□□ -0.71
MSH6-201ENST00000234420 TPSB2P20231 275 aa10.6□□□□□ -0.71
MSH6-201ENST00000234420 FRKP42685 505 aaPredicted RBP10.6□□□□□ -0.71
MSH6-201ENST00000234420 CX3CR1P49238 355 aa10.6□□□□□ -0.71
MSH6-201ENST00000234420 TPMTP51580 245 aa10.6□□□□□ -0.71
MSH6-201ENST00000234420 DLX2Q07687 328 aaPredicted RBP10.6□□□□□ -0.71
MSH6-201ENST00000234420 RAB35Q15286 201 aa10.6□□□□□ -0.71
MSH6-201ENST00000234420 TPSAB1Q15661 275 aa10.6□□□□□ -0.71
MSH6-201ENST00000234420 SLC35G1Q2M3R5 365 aa10.6□□□□□ -0.71
MSH6-201ENST00000234420 ITPRIPL2Q3MIP1 535 aa10.6□□□□□ -0.71
MSH6-201ENST00000234420 HSH2DQ96JZ2 352 aa10.6□□□□□ -0.71
MSH6-201ENST00000234420 C17orf62Q9BQA9 187 aa10.6□□□□□ -0.71
MSH6-201ENST00000234420 ASB6Q9NWX5 421 aa10.6□□□□□ -0.71
MSH6-201ENST00000234420 SAGE1Q9NXZ1 904 aa10.6□□□□□ -0.71
MSH6-201ENST00000234420 SLC7A11Q9UPY5 501 aa10.6□□□□□ -0.71
MSH6-201ENST00000234420 IQGAP3Q86VI3 1631 aa10.6□□□□□ -0.71
MSH6-201ENST00000234420 ANKUB1A6NFN9 424 aa10.6□□□□□ -0.71
MSH6-201ENST00000234420 C5orf60A6NFR6 353 aa10.6□□□□□ -0.71
MSH6-201ENST00000234420 AP1G1O43747 822 aa10.6□□□□□ -0.71
MSH6-201ENST00000234420 FPR1P21462 350 aa10.6□□□□□ -0.71
MSH6-201ENST00000234420 HMGCS1Q01581 520 aa10.6□□□□□ -0.71
MSH6-201ENST00000234420 NSDHLQ15738 373 aa10.6□□□□□ -0.71
MSH6-201ENST00000234420 FLYWCH1Q4VC44 716 aa10.6□□□□□ -0.71
MSH6-201ENST00000234420 C6orf141Q5SZD1 244 aa10.6□□□□□ -0.71
MSH6-201ENST00000234420 LCN10Q6JVE6 187 aa10.6□□□□□ -0.71
MSH6-201ENST00000234420 TRIM46Q7Z4K8 759 aa10.6□□□□□ -0.71
MSH6-201ENST00000234420 PLD4Q96BZ4 506 aa10.6□□□□□ -0.71
MSH6-201ENST00000234420 NARFLQ9H6Q4 476 aa10.6□□□□□ -0.71
MSH6-201ENST00000234420 PRTFDC1Q9NRG1 225 aa10.6□□□□□ -0.71
MSH6-201ENST00000234420 ZNF358Q9NW07 568 aa10.6□□□□□ -0.71
MSH6-201ENST00000234420 HSFX1Q9UBD0 423 aa10.6□□□□□ -0.71
MSH6-201ENST00000234420 USP31Q70CQ4 1352 aa10.6□□□□□ -0.71
MSH6-201ENST00000234420 TNS2Q63HR2 1409 aa10.6□□□□□ -0.71
MSH6-201ENST00000234420 TET3O43151 1660 aa10.6□□□□□ -0.71
MSH6-201ENST00000234420 FAM237AA0A1B0GTK4 181 aa10.6□□□□□ -0.71
MSH6-201ENST00000234420 BTBD17A6NE02 478 aa10.6□□□□□ -0.71
MSH6-201ENST00000234420 CAPN5O15484 640 aaPredicted RBP10.6□□□□□ -0.71
MSH6-201ENST00000234420 KNG1P01042 644 aa10.6□□□□□ -0.71
MSH6-201ENST00000234420 ZNF28P17035 718 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms