RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 SFTPBP07988 381 aa13.14□□□□□ -0.31
HCFC2-201ENST00000229330 FRKP42685 505 aaPredicted RBP13.14□□□□□ -0.31
HCFC2-201ENST00000229330 ZNF783Q6ZMS7 281 aa13.14□□□□□ -0.31
HCFC2-201ENST00000229330 LRRC28Q86X40 367 aaPredicted RBP13.14□□□□□ -0.31
HCFC2-201ENST00000229330 SUN3Q8TAQ9 357 aa13.14□□□□□ -0.31
HCFC2-201ENST00000229330 TMEM174Q8WUU8 243 aa13.14□□□□□ -0.31
HCFC2-201ENST00000229330 SMPDL3AQ92484 453 aa13.14□□□□□ -0.31
HCFC2-201ENST00000229330 TMEM19Q96HH6 336 aa13.14□□□□□ -0.31
HCFC2-201ENST00000229330 RAD9AQ99638 391 aa13.14□□□□□ -0.31
HCFC2-201ENST00000229330 SLC6A7Q99884 636 aa13.14□□□□□ -0.31
HCFC2-201ENST00000229330 PSD2Q9BQI7 771 aa13.14□□□□□ -0.31
HCFC2-201ENST00000229330 WASH6PQ9NQA3 447 aa13.14□□□□□ -0.31
HCFC2-201ENST00000229330 PRMT8Q9NR22 394 aaPredicted RBP13.14□□□□□ -0.31
HCFC2-201ENST00000229330 TREX1Q9NSU2 369 aa13.14□□□□□ -0.31
HCFC2-201ENST00000229330 TIAM2Q8IVF5 1701 aa13.14□□□□□ -0.31
HCFC2-201ENST00000229330 POM121CA8CG34 1229 aa13.14□□□□□ -0.31
HCFC2-201ENST00000229330 SNAPINO95295 136 aa13.14□□□□□ -0.31
HCFC2-201ENST00000229330 MEF2AQ02078 507 aaPredicted RBP13.14□□□□□ -0.31
HCFC2-201ENST00000229330 RAB40BQ12829 278 aa13.14□□□□□ -0.31
HCFC2-201ENST00000229330 OR5T2Q8NGG2 359 aa13.14□□□□□ -0.31
HCFC2-201ENST00000229330 OR9A1PQ8NGU1 263 aa13.14□□□□□ -0.31
HCFC2-201ENST00000229330 OR2AJ1Q8NGZ0 328 aa13.14□□□□□ -0.31
HCFC2-201ENST00000229330 TAPBPLQ9BX59 468 aa13.14□□□□□ -0.31
HCFC2-201ENST00000229330 FAM155AB1AL88 458 aaPredicted RBP13.14□□□□□ -0.31
HCFC2-201ENST00000229330 PTHP01270 115 aa13.14□□□□□ -0.31
HCFC2-201ENST00000229330 TPMTP51580 245 aa13.14□□□□□ -0.31
HCFC2-201ENST00000229330 OPCMLQ14982 345 aa13.14□□□□□ -0.31
HCFC2-201ENST00000229330 DPY19L2P1Q6NXN4 242 aa13.14□□□□□ -0.31
HCFC2-201ENST00000229330 GPRIN1Q7Z2K8 1008 aa13.14□□□□□ -0.31
HCFC2-201ENST00000229330 NUP54Q7Z3B4 507 aa13.14□□□□□ -0.31
HCFC2-201ENST00000229330 SULT1C2O00338 296 aa13.14□□□□□ -0.31
HCFC2-201ENST00000229330 CD3GP09693 182 aa13.14□□□□□ -0.31
HCFC2-201ENST00000229330 CERS1P27544 350 aa13.14□□□□□ -0.31
HCFC2-201ENST00000229330 PREPP48147 710 aa13.14□□□□□ -0.31
HCFC2-201ENST00000229330 SUSD1Q6UWL2 747 aa13.14□□□□□ -0.31
HCFC2-201ENST00000229330 RFPL4BQ6ZWI9 263 aa13.14□□□□□ -0.31
HCFC2-201ENST00000229330 FBXL21Q9UKT6 434 aa13.14□□□□□ -0.31
HCFC2-201ENST00000229330 AP1M2Q9Y6Q5 423 aa13.14□□□□□ -0.31
HCFC2-201ENST00000229330 A0A1W2PPL8 197 aa13.14□□□□□ -0.31
HCFC2-201ENST00000229330 OR2A25A4D2G3 310 aa13.14□□□□□ -0.31
HCFC2-201ENST00000229330 NDUFS4O43181 175 aa13.14□□□□□ -0.31
HCFC2-201ENST00000229330 C1GALT1C1LP0DN25 315 aa13.14□□□□□ -0.31
HCFC2-201ENST00000229330 AKT2P31751 481 aa13.14□□□□□ -0.31
HCFC2-201ENST00000229330 PIGAP37287 484 aa13.14□□□□□ -0.31
HCFC2-201ENST00000229330 ENPP2Q13822 863 aa13.14□□□□□ -0.31
HCFC2-201ENST00000229330 CDNFQ49AH0 187 aa13.14□□□□□ -0.31
HCFC2-201ENST00000229330 GSG1LQ6UXU4 331 aa13.14□□□□□ -0.31
HCFC2-201ENST00000229330 SVBPQ8N300 66 aa13.14□□□□□ -0.31
HCFC2-201ENST00000229330 OR5T3Q8NGG3 340 aa13.14□□□□□ -0.31
HCFC2-201ENST00000229330 DEC1Q9P2X7 70 aa13.14□□□□□ -0.31
HCFC2-201ENST00000229330 GNRH1P01148 92 aa13.13□□□□□ -0.31
HCFC2-201ENST00000229330 VIPR1P32241 457 aa13.13□□□□□ -0.31
HCFC2-201ENST00000229330 LIPAP38571 399 aa13.13□□□□□ -0.31
HCFC2-201ENST00000229330 GPR4P46093 362 aa13.13□□□□□ -0.31
HCFC2-201ENST00000229330 PLBD1Q6P4A8 553 aa13.13□□□□□ -0.31
HCFC2-201ENST00000229330 FN3KQ9H479 309 aa13.13□□□□□ -0.31
HCFC2-201ENST00000229330 TRPM3Q9HCF6 1732 aaPredicted RBP13.13□□□□□ -0.31
HCFC2-201ENST00000229330 TRBV23OR9-2A0A075B6M9 112 aa13.13□□□□□ -0.31
HCFC2-201ENST00000229330 MT-ND4P03905 459 aa13.13□□□□□ -0.31
HCFC2-201ENST00000229330 CD9P21926 228 aa13.13□□□□□ -0.31
HCFC2-201ENST00000229330 LRRC32Q14392 662 aa13.13□□□□□ -0.31
HCFC2-201ENST00000229330 RAB41Q5JT25 222 aa13.13□□□□□ -0.31
HCFC2-201ENST00000229330 PM20D1Q6GTS8 502 aa13.13□□□□□ -0.31
HCFC2-201ENST00000229330 FRMPD2BQ6IN97 320 aa13.13□□□□□ -0.31
HCFC2-201ENST00000229330 TBPL2Q6SJ96 375 aa13.13□□□□□ -0.31
HCFC2-201ENST00000229330 Q6ZPB1 254 aaPredicted RBP13.13□□□□□ -0.31
HCFC2-201ENST00000229330 HMGN2P46Q86SG4 172 aa13.13□□□□□ -0.31
HCFC2-201ENST00000229330 FCRL1Q96LA6 429 aa13.13□□□□□ -0.31
HCFC2-201ENST00000229330 ZNF583Q96ND8 569 aa13.13□□□□□ -0.31
HCFC2-201ENST00000229330 PBDC1Q9BVG4 233 aa13.13□□□□□ -0.31
HCFC2-201ENST00000229330 METTL17Q9H7H0 456 aaPredicted RBP13.13□□□□□ -0.31
HCFC2-201ENST00000229330 BTNL2Q9UIR0 455 aa13.13□□□□□ -0.31
HCFC2-201ENST00000229330 TRIM64A6NGJ6 449 aa13.13□□□□□ -0.31
HCFC2-201ENST00000229330 TRIM64BA6NI03 449 aa13.13□□□□□ -0.31
HCFC2-201ENST00000229330 TXNL1O43396 289 aa13.13□□□□□ -0.31
HCFC2-201ENST00000229330 ZNF30P17039 623 aa13.13□□□□□ -0.31
HCFC2-201ENST00000229330 PSMD8P48556 350 aa13.13□□□□□ -0.31
HCFC2-201ENST00000229330 DLX5P56178 289 aa13.13□□□□□ -0.31
HCFC2-201ENST00000229330 HES5Q5TA89 166 aa13.13□□□□□ -0.31
HCFC2-201ENST00000229330 GDPD3Q7L5L3 318 aa13.13□□□□□ -0.31
HCFC2-201ENST00000229330 BOLLQ8N9W6 283 aaKnown RBP13.13□□□□□ -0.31
HCFC2-201ENST00000229330 THAP4Q8WY91 577 aa13.13□□□□□ -0.31
HCFC2-201ENST00000229330 FAM46AQ96IP4 442 aaKnown RBP13.13□□□□□ -0.31
HCFC2-201ENST00000229330 WDR83Q9BRX9 315 aaKnown RBP13.13□□□□□ -0.31
HCFC2-201ENST00000229330 PRDM9Q9NQV7 894 aa13.13□□□□□ -0.31
HCFC2-201ENST00000229330 PDLIM7Q9NR12 457 aa13.13□□□□□ -0.31
HCFC2-201ENST00000229330 SMLR1H3BR10 107 aa13.13□□□□□ -0.31
HCFC2-201ENST00000229330 TUBG1P23258 451 aa13.13□□□□□ -0.31
HCFC2-201ENST00000229330 ACTBP60709 375 aa13.13□□□□□ -0.31
HCFC2-201ENST00000229330 RAP2BP61225 183 aa13.13□□□□□ -0.31
HCFC2-201ENST00000229330 ACTG1P63261 375 aa13.13□□□□□ -0.31
HCFC2-201ENST00000229330 ZNF616Q08AN1 781 aa13.13□□□□□ -0.31
HCFC2-201ENST00000229330 GXYLT1Q4G148 440 aa13.13□□□□□ -0.31
HCFC2-201ENST00000229330 ZNF529Q6P280 563 aa13.13□□□□□ -0.31
HCFC2-201ENST00000229330 BRAT1Q6PJG6 821 aa13.13□□□□□ -0.31
HCFC2-201ENST00000229330 MAMDC4Q6UXC1 1216 aa13.13□□□□□ -0.31
HCFC2-201ENST00000229330 SLC22A15Q8IZD6 547 aa13.13□□□□□ -0.31
HCFC2-201ENST00000229330 KCT2Q8NC54 265 aa13.13□□□□□ -0.31
HCFC2-201ENST00000229330 OR51A7Q8NH64 312 aa13.13□□□□□ -0.31
HCFC2-201ENST00000229330 ISL2Q96A47 359 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms