RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 CSF2P04141 144 aa12.61□□□□□ -0.39
COL1A1-201ENST00000225964 IER5LQ5T953 404 aa12.61□□□□□ -0.39
COL1A1-201ENST00000225964 EMC10Q5UCC4 262 aa12.61□□□□□ -0.39
COL1A1-201ENST00000225964 DUS1LQ6P1R4 473 aaKnown RBP12.61□□□□□ -0.39
COL1A1-201ENST00000225964 LANCL3Q6ZV70 420 aa12.61□□□□□ -0.39
COL1A1-201ENST00000225964 SFXN2Q96NB2 322 aa12.61□□□□□ -0.39
COL1A1-201ENST00000225964 OSBPL7Q9BZF2 842 aa12.61□□□□□ -0.39
COL1A1-201ENST00000225964 MYNNQ9NPC7 610 aa12.61□□□□□ -0.39
COL1A1-201ENST00000225964 SEC14L4Q9UDX3 406 aa12.61□□□□□ -0.39
COL1A1-201ENST00000225964 SLCO3A1Q9UIG8 710 aa12.61□□□□□ -0.39
COL1A1-201ENST00000225964 GXYLT2A0PJZ3 443 aa12.61□□□□□ -0.39
COL1A1-201ENST00000225964 CLCA1A8K7I4 914 aa12.61□□□□□ -0.39
COL1A1-201ENST00000225964 HHLA1C9JL84 531 aa12.61□□□□□ -0.39
COL1A1-201ENST00000225964 PHYHO14832 338 aa12.61□□□□□ -0.39
COL1A1-201ENST00000225964 CD53P19397 219 aa12.61□□□□□ -0.39
COL1A1-201ENST00000225964 VEGFBP49765 207 aa12.61□□□□□ -0.39
COL1A1-201ENST00000225964 AKR1C2P52895 323 aa12.61□□□□□ -0.39
COL1A1-201ENST00000225964 JAG1P78504 1218 aa12.61□□□□□ -0.39
COL1A1-201ENST00000225964 HTRA3P83110 453 aa12.61□□□□□ -0.39
COL1A1-201ENST00000225964 TLE3Q04726 772 aa12.61□□□□□ -0.39
COL1A1-201ENST00000225964 GPR157Q5UAW9 335 aa12.61□□□□□ -0.39
COL1A1-201ENST00000225964 FBXO46Q6PJ61 603 aaPredicted RBP12.61□□□□□ -0.39
COL1A1-201ENST00000225964 OR8J3Q8NGG0 315 aa12.61□□□□□ -0.39
COL1A1-201ENST00000225964 LATS1O95835 1130 aa12.6□□□□□ -0.39
COL1A1-201ENST00000225964 FESP07332 822 aa12.6□□□□□ -0.39
COL1A1-201ENST00000225964 DRD1P21728 446 aa12.6□□□□□ -0.39
COL1A1-201ENST00000225964 MFSD13AQ14CX5 517 aa12.6□□□□□ -0.39
COL1A1-201ENST00000225964 C6orf136Q5SQH8 315 aa12.6□□□□□ -0.39
COL1A1-201ENST00000225964 CFAP77Q6ZQR2 320 aa12.6□□□□□ -0.39
COL1A1-201ENST00000225964 ZNF610Q8N9Z0 462 aa12.6□□□□□ -0.39
COL1A1-201ENST00000225964 GLYATL2Q8WU03 294 aa12.6□□□□□ -0.39
COL1A1-201ENST00000225964 CREB3L1Q96BA8 519 aa12.6□□□□□ -0.39
COL1A1-201ENST00000225964 MYRFLQ96LU7 910 aa12.6□□□□□ -0.39
COL1A1-201ENST00000225964 SLC2A13Q96QE2 648 aa12.6□□□□□ -0.39
COL1A1-201ENST00000225964 SERINC2Q96SA4 455 aa12.6□□□□□ -0.39
COL1A1-201ENST00000225964 C2orf72A6NCS6 295 aa12.6□□□□□ -0.39
COL1A1-201ENST00000225964 IFNA1P01562 189 aa12.6□□□□□ -0.39
COL1A1-201ENST00000225964 DIO3P55073 304 aa12.6□□□□□ -0.39
COL1A1-201ENST00000225964 C3P1Q6ZMU1 363 aa12.6□□□□□ -0.39
COL1A1-201ENST00000225964 MRPL21Q7Z2W9 205 aaKnown RBP12.6□□□□□ -0.39
COL1A1-201ENST00000225964 CNEP1R1Q8N9A8 125 aa12.6□□□□□ -0.39
COL1A1-201ENST00000225964 OR51T1Q8NGJ9 327 aa12.6□□□□□ -0.39
COL1A1-201ENST00000225964 S100PBPQ96BU1 408 aa12.6□□□□□ -0.39
COL1A1-201ENST00000225964 ATG12O94817 140 aa12.6□□□□□ -0.39
COL1A1-201ENST00000225964 PRLP01236 227 aa12.6□□□□□ -0.39
COL1A1-201ENST00000225964 CEBPBP17676 345 aa12.6□□□□□ -0.39
COL1A1-201ENST00000225964 GDF1P27539 372 aa12.6□□□□□ -0.39
COL1A1-201ENST00000225964 P2RY2P41231 377 aa12.6□□□□□ -0.39
COL1A1-201ENST00000225964 CTXN1P60606 82 aa12.6□□□□□ -0.39
COL1A1-201ENST00000225964 NPRL3Q12980 569 aa12.6□□□□□ -0.39
COL1A1-201ENST00000225964 ZNF404Q494X3 552 aa12.6□□□□□ -0.39
COL1A1-201ENST00000225964 FAM180BQ6P0A1 224 aa12.6□□□□□ -0.39
COL1A1-201ENST00000225964 MAFIPQ8WZ33 124 aa12.6□□□□□ -0.39
COL1A1-201ENST00000225964 PSAT1Q9Y617 370 aa12.6□□□□□ -0.39
COL1A1-201ENST00000225964 A0A1B0GV50 99 aa12.6□□□□□ -0.39
COL1A1-201ENST00000225964 H3BSA7 217 aa12.6□□□□□ -0.39
COL1A1-201ENST00000225964 LCATP04180 440 aa12.6□□□□□ -0.39
COL1A1-201ENST00000225964 SPINT3P49223 89 aa12.6□□□□□ -0.39
COL1A1-201ENST00000225964 EEF1A2Q05639 463 aaKnown RBP12.6□□□□□ -0.39
COL1A1-201ENST00000225964 FADDQ13158 208 aa12.6□□□□□ -0.39
COL1A1-201ENST00000225964 EIF2B1Q14232 305 aaKnown RBP12.6□□□□□ -0.39
COL1A1-201ENST00000225964 EIF4HQ15056 248 aaKnown RBP12.6□□□□□ -0.39
COL1A1-201ENST00000225964 OR4K13Q8NH42 304 aa12.6□□□□□ -0.39
COL1A1-201ENST00000225964 C16orf78Q8WTQ4 265 aa12.6□□□□□ -0.39
COL1A1-201ENST00000225964 SLCO2A1Q92959 643 aa12.6□□□□□ -0.39
COL1A1-201ENST00000225964 RGCCQ9H4X1 137 aa12.6□□□□□ -0.39
COL1A1-201ENST00000225964 GPRC5BQ9NZH0 403 aa12.6□□□□□ -0.39
COL1A1-201ENST00000225964 SOX4Q06945 474 aaPredicted RBP12.6□□□□□ -0.39
COL1A1-201ENST00000225964 AADACL4Q5VUY2 407 aa12.6□□□□□ -0.39
COL1A1-201ENST00000225964 PRAMEF8Q5VWM4 474 aa12.6□□□□□ -0.39
COL1A1-201ENST00000225964 PRAMEF7Q5VXH5 474 aa12.6□□□□□ -0.39
COL1A1-201ENST00000225964 RABEPKQ7Z6M1 372 aa12.6□□□□□ -0.39
COL1A1-201ENST00000225964 CHPT1Q8WUD6 406 aa12.6□□□□□ -0.39
COL1A1-201ENST00000225964 ZUFSPQ96AP4 578 aa12.6□□□□□ -0.39
COL1A1-201ENST00000225964 SLC41A3Q96GZ6 507 aa12.6□□□□□ -0.39
COL1A1-201ENST00000225964 HOXD1Q9GZZ0 328 aa12.6□□□□□ -0.39
COL1A1-201ENST00000225964 HAO2Q9NYQ3 351 aa12.6□□□□□ -0.39
COL1A1-201ENST00000225964 SGK494L7N484 410 aa12.59□□□□□ -0.39
COL1A1-201ENST00000225964 ABOP16442 354 aa12.59□□□□□ -0.39
COL1A1-201ENST00000225964 TECRLQ5HYJ1 363 aa12.59□□□□□ -0.39
COL1A1-201ENST00000225964 NPRL2Q8WTW4 380 aa12.59□□□□□ -0.39
COL1A1-201ENST00000225964 PCYT2Q99447 389 aa12.59□□□□□ -0.39
COL1A1-201ENST00000225964 SYT4Q9H2B2 425 aa12.59□□□□□ -0.39
COL1A1-201ENST00000225964 DNAJB11Q9UBS4 358 aa12.59□□□□□ -0.39
COL1A1-201ENST00000225964 AP1M2Q9Y6Q5 423 aa12.59□□□□□ -0.39
COL1A1-201ENST00000225964 PPP1R3DO95685 299 aa12.59□□□□□ -0.39
COL1A1-201ENST00000225964 BPIP17213 487 aa12.59□□□□□ -0.39
COL1A1-201ENST00000225964 ERVK-16P61578 105 aa12.59□□□□□ -0.39
COL1A1-201ENST00000225964 C22orf42Q6IC83 251 aa12.59□□□□□ -0.39
COL1A1-201ENST00000225964 CHST14Q8NCH0 376 aa12.59□□□□□ -0.39
COL1A1-201ENST00000225964 RDH12Q96NR8 316 aa12.59□□□□□ -0.39
COL1A1-201ENST00000225964 RANBP9Q96S59 729 aa12.59□□□□□ -0.39
COL1A1-201ENST00000225964 C17orf105B2RV13 164 aa12.59□□□□□ -0.39
COL1A1-201ENST00000225964 SLITRK5O94991 958 aa12.59□□□□□ -0.39
COL1A1-201ENST00000225964 CER1O95813 267 aa12.59□□□□□ -0.39
COL1A1-201ENST00000225964 RBPJQ06330 500 aa12.59□□□□□ -0.39
COL1A1-201ENST00000225964 RPS26P11Q5JNZ5 115 aaPredicted RBP12.59□□□□□ -0.39
COL1A1-201ENST00000225964 ZNF773Q6PK81 442 aa12.59□□□□□ -0.39
COL1A1-201ENST00000225964 UNC5DQ6UXZ4 953 aa12.59□□□□□ -0.39
COL1A1-201ENST00000225964 ZFYVE21Q9BQ24 234 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms