RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 HMGN2P05204 90 aaKnown RBP11.41□□□□□ -0.58
CHPF2-201ENST00000035307 SLC19A1P41440 591 aa11.41□□□□□ -0.58
CHPF2-201ENST00000035307 DAPP51397 102 aa11.41□□□□□ -0.58
CHPF2-201ENST00000035307 SLC14A1Q13336 389 aa11.41□□□□□ -0.58
CHPF2-201ENST00000035307 MYBPC3Q14896 1274 aa11.41□□□□□ -0.58
CHPF2-201ENST00000035307 ZNF791Q3KP31 576 aaPredicted RBP11.41□□□□□ -0.58
CHPF2-201ENST00000035307 C6orf132Q5T0Z8 1188 aa11.41□□□□□ -0.58
CHPF2-201ENST00000035307 CPZQ66K79 652 aa11.41□□□□□ -0.58
CHPF2-201ENST00000035307 USP43Q70EL4 1123 aa11.41□□□□□ -0.58
CHPF2-201ENST00000035307 OR4C6Q8NH72 309 aa11.41□□□□□ -0.58
CHPF2-201ENST00000035307 FNDC8Q8TC99 324 aa11.41□□□□□ -0.58
CHPF2-201ENST00000035307 FAM46AQ96IP4 442 aaKnown RBP11.41□□□□□ -0.58
CHPF2-201ENST00000035307 TEX10Q9NXF1 929 aaPredicted RBP11.41□□□□□ -0.58
CHPF2-201ENST00000035307 ADAM30Q9UKF2 790 aa11.41□□□□□ -0.58
CHPF2-201ENST00000035307 MRPS33Q9Y291 106 aaKnown RBP11.41□□□□□ -0.58
CHPF2-201ENST00000035307 MED12Q93074 2177 aa11.41□□□□□ -0.58
CHPF2-201ENST00000035307 FAM183AA6NL82 134 aa11.4□□□□□ -0.58
CHPF2-201ENST00000035307 TFPIP10646 304 aa11.4□□□□□ -0.58
CHPF2-201ENST00000035307 NPPBP16860 134 aa11.4□□□□□ -0.58
CHPF2-201ENST00000035307 ZNF12P17014 697 aa11.4□□□□□ -0.58
CHPF2-201ENST00000035307 SUOXP51687 545 aa11.4□□□□□ -0.58
CHPF2-201ENST00000035307 CRISP1P54107 249 aa11.4□□□□□ -0.58
CHPF2-201ENST00000035307 CD83Q01151 205 aa11.4□□□□□ -0.58
CHPF2-201ENST00000035307 ZNF267Q14586 743 aaPredicted RBP11.4□□□□□ -0.58
CHPF2-201ENST00000035307 RPE65Q16518 533 aa11.4□□□□□ -0.58
CHPF2-201ENST00000035307 TMEM179BQ7Z7N9 219 aa11.4□□□□□ -0.58
CHPF2-201ENST00000035307 ZNF547Q8IVP9 402 aa11.4□□□□□ -0.58
CHPF2-201ENST00000035307 ZDHHC1Q8WTX9 485 aa11.4□□□□□ -0.58
CHPF2-201ENST00000035307 COQ10AQ96MF6 247 aa11.4□□□□□ -0.58
CHPF2-201ENST00000035307 TRNT1Q96Q11 434 aaKnown RBP11.4□□□□□ -0.58
CHPF2-201ENST00000035307 ZDHHC5Q9C0B5 715 aa11.4□□□□□ -0.58
CHPF2-201ENST00000035307 AMBRA1Q9C0C7 1298 aa11.4□□□□□ -0.58
CHPF2-201ENST00000035307 SMOC1Q9H4F8 434 aa11.4□□□□□ -0.58
CHPF2-201ENST00000035307 ZNF236Q9UL36 1845 aa11.4□□□□□ -0.58
CHPF2-201ENST00000035307 ASPDHA6ND91 283 aa11.4□□□□□ -0.58
CHPF2-201ENST00000035307 RIIAD1A6NNX1 92 aa11.4□□□□□ -0.58
CHPF2-201ENST00000035307 SMAD9O15198 467 aaKnown RBP11.4□□□□□ -0.58
CHPF2-201ENST00000035307 LAMTOR5O43504 91 aa11.4□□□□□ -0.58
CHPF2-201ENST00000035307 LINC00271P0C7V0 271 aa11.4□□□□□ -0.58
CHPF2-201ENST00000035307 SELENOWP63302 87 aa11.4□□□□□ -0.58
CHPF2-201ENST00000035307 FCHO2Q0JRZ9 810 aa11.4□□□□□ -0.58
CHPF2-201ENST00000035307 NKG7Q16617 165 aa11.4□□□□□ -0.58
CHPF2-201ENST00000035307 FBXO43Q4G163 708 aa11.4□□□□□ -0.58
CHPF2-201ENST00000035307 B3GNT8Q7Z7M8 397 aa11.4□□□□□ -0.58
CHPF2-201ENST00000035307 GALNT7Q86SF2 657 aa11.4□□□□□ -0.58
CHPF2-201ENST00000035307 OR52N2Q8NGI0 321 aa11.4□□□□□ -0.58
CHPF2-201ENST00000035307 OR9A2Q8NGT5 310 aa11.4□□□□□ -0.58
CHPF2-201ENST00000035307 OR8K3Q8NH51 312 aa11.4□□□□□ -0.58
CHPF2-201ENST00000035307 RASSF5Q8WWW0 418 aa11.4□□□□□ -0.58
CHPF2-201ENST00000035307 ZNF300Q96RE9 604 aaPredicted RBP11.4□□□□□ -0.58
CHPF2-201ENST00000035307 TTYH1Q9H313 450 aaPredicted RBP11.4□□□□□ -0.58
CHPF2-201ENST00000035307 ABCD2Q9UBJ2 740 aa11.4□□□□□ -0.58
CHPF2-201ENST00000035307 SIT1Q9Y3P8 196 aa11.4□□□□□ -0.58
CHPF2-201ENST00000035307 SLC9B1P1A6NJY1 282 aa11.4□□□□□ -0.59
CHPF2-201ENST00000035307 MAN2B1O00754 1011 aa11.4□□□□□ -0.59
CHPF2-201ENST00000035307 SLC16A5O15375 505 aa11.4□□□□□ -0.59
CHPF2-201ENST00000035307 PCDHGA12O60330 932 aa11.4□□□□□ -0.59
CHPF2-201ENST00000035307 ADAM23O75077 832 aa11.4□□□□□ -0.59
CHPF2-201ENST00000035307 REM1O75628 298 aa11.4□□□□□ -0.59
CHPF2-201ENST00000035307 ACADLP28330 430 aa11.4□□□□□ -0.59
CHPF2-201ENST00000035307 TMBIM6P55061 237 aa11.4□□□□□ -0.59
CHPF2-201ENST00000035307 TAS2R38P59533 333 aa11.4□□□□□ -0.59
CHPF2-201ENST00000035307 FGL2Q14314 439 aa11.4□□□□□ -0.59
CHPF2-201ENST00000035307 GPR18Q14330 331 aa11.4□□□□□ -0.59
CHPF2-201ENST00000035307 C6orf183Q5T699 404 aa11.4□□□□□ -0.59
CHPF2-201ENST00000035307 RANBP3LQ86VV4 465 aaPredicted RBP11.4□□□□□ -0.59
CHPF2-201ENST00000035307 ZNF420Q8TAQ5 688 aaPredicted RBP11.4□□□□□ -0.59
CHPF2-201ENST00000035307 PDLIM5Q96HC4 596 aaKnown RBP11.4□□□□□ -0.59
CHPF2-201ENST00000035307 OR4K3Q96R72 315 aa11.4□□□□□ -0.59
CHPF2-201ENST00000035307 RLIMQ9NVW2 624 aa11.4□□□□□ -0.59
CHPF2-201ENST00000035307 TAAR2Q9P1P5 351 aa11.4□□□□□ -0.59
CHPF2-201ENST00000035307 PEX16Q9Y5Y5 336 aa11.4□□□□□ -0.59
CHPF2-201ENST00000035307 BLOC1S5-TXNDC5H3BN57 136 aa11.39□□□□□ -0.59
CHPF2-201ENST00000035307 GPR37L1O60883 481 aa11.39□□□□□ -0.59
CHPF2-201ENST00000035307 SLC25A12O75746 678 aa11.39□□□□□ -0.59
CHPF2-201ENST00000035307 KCNK5O95279 499 aa11.39□□□□□ -0.59
CHPF2-201ENST00000035307 GKN3PP0CG01 181 aa11.39□□□□□ -0.59
CHPF2-201ENST00000035307 GSTM2P28161 218 aa11.39□□□□□ -0.59
CHPF2-201ENST00000035307 CD6P30203 668 aa11.39□□□□□ -0.59
CHPF2-201ENST00000035307 NAA10P41227 235 aaPredicted RBP11.39□□□□□ -0.59
CHPF2-201ENST00000035307 MLLT3P42568 568 aaPredicted RBP11.39□□□□□ -0.59
CHPF2-201ENST00000035307 SLC15A1P46059 708 aa11.39□□□□□ -0.59
CHPF2-201ENST00000035307 KCNC3Q14003 757 aa11.39□□□□□ -0.59
CHPF2-201ENST00000035307 ZFP69Q49AA0 526 aa11.39□□□□□ -0.59
CHPF2-201ENST00000035307 TTLL10Q6ZVT0 673 aa11.39□□□□□ -0.59
CHPF2-201ENST00000035307 IGFN1Q86VF2 1251 aa11.39□□□□□ -0.59
CHPF2-201ENST00000035307 RBM45Q8IUH3 476 aaKnown RBP11.39□□□□□ -0.59
CHPF2-201ENST00000035307 LNX2Q8N448 690 aa11.39□□□□□ -0.59
CHPF2-201ENST00000035307 HORMAD2Q8N7B1 307 aa11.39□□□□□ -0.59
CHPF2-201ENST00000035307 UFD1Q92890 307 aa11.39□□□□□ -0.59
CHPF2-201ENST00000035307 PEX11GQ96HA9 241 aa11.39□□□□□ -0.59
CHPF2-201ENST00000035307 OR8D2Q9GZM6 311 aa11.39□□□□□ -0.59
CHPF2-201ENST00000035307 TMEM9Q9P0T7 183 aa11.39□□□□□ -0.59
CHPF2-201ENST00000035307 CLCA3PQ9Y6N3 262 aa11.39□□□□□ -0.59
CHPF2-201ENST00000035307 H0YJX3 145 aa11.39□□□□□ -0.59
CHPF2-201ENST00000035307 WWP2O00308 870 aa11.39□□□□□ -0.59
CHPF2-201ENST00000035307 SSNA1O43805 119 aa11.39□□□□□ -0.59
CHPF2-201ENST00000035307 NOS1APO75052 506 aaPredicted RBP11.39□□□□□ -0.59
CHPF2-201ENST00000035307 FHP07954 510 aa11.39□□□□□ -0.59
CHPF2-201ENST00000035307 IGFBP1P08833 259 aaPredicted RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms