RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 RDH16O75452 317 aa13.4□□□□□ -0.26
RTFDC1-201ENST00000023939 SOX30O94993 753 aa13.4□□□□□ -0.26
RTFDC1-201ENST00000023939 EPPINO95925 133 aa13.4□□□□□ -0.26
RTFDC1-201ENST00000023939 H1F0P07305 194 aaKnown RBP13.4□□□□□ -0.26
RTFDC1-201ENST00000023939 SLC35E2P0CK97 266 aa13.4□□□□□ -0.26
RTFDC1-201ENST00000023939 IL5RAQ01344 420 aa13.4□□□□□ -0.26
RTFDC1-201ENST00000023939 IL1RL1Q01638 556 aa13.4□□□□□ -0.26
RTFDC1-201ENST00000023939 DMWDQ09019 674 aa13.4□□□□□ -0.26
RTFDC1-201ENST00000023939 MGAT2Q10469 447 aa13.4□□□□□ -0.26
RTFDC1-201ENST00000023939 PRICKLE4Q2TBC4 344 aa13.4□□□□□ -0.26
RTFDC1-201ENST00000023939 DEFB110Q30KQ9 67 aa13.4□□□□□ -0.26
RTFDC1-201ENST00000023939 ARHGAP11BQ3KRB8 267 aa13.4□□□□□ -0.26
RTFDC1-201ENST00000023939 TCTE1Q5JU00 501 aa13.4□□□□□ -0.26
RTFDC1-201ENST00000023939 AP1ARQ63HQ0 302 aa13.4□□□□□ -0.26
RTFDC1-201ENST00000023939 DHRS4L2Q6PKH6 230 aa13.4□□□□□ -0.26
RTFDC1-201ENST00000023939 FAM92BQ6ZTR7 304 aa13.4□□□□□ -0.26
RTFDC1-201ENST00000023939 C16orf62Q7Z3J2 963 aa13.4□□□□□ -0.26
RTFDC1-201ENST00000023939 OR9A4Q8NGU2 314 aa13.4□□□□□ -0.26
RTFDC1-201ENST00000023939 HOXB13Q92826 284 aaPredicted RBP13.4□□□□□ -0.26
RTFDC1-201ENST00000023939 COL26A1Q96A83 441 aa13.4□□□□□ -0.26
RTFDC1-201ENST00000023939 CNDP2Q96KP4 475 aaKnown RBP13.4□□□□□ -0.26
RTFDC1-201ENST00000023939 TSC22D3Q99576 134 aa13.4□□□□□ -0.26
RTFDC1-201ENST00000023939 PIGUQ9H490 435 aa13.4□□□□□ -0.26
RTFDC1-201ENST00000023939 TRIM45Q9H8W5 580 aaPredicted RBP13.4□□□□□ -0.26
RTFDC1-201ENST00000023939 ZNF556Q9HAH1 456 aa13.4□□□□□ -0.26
RTFDC1-201ENST00000023939 EQTNQ9NQ60 294 aa13.4□□□□□ -0.26
RTFDC1-201ENST00000023939 PRDM6Q9NQX0 595 aa13.4□□□□□ -0.26
RTFDC1-201ENST00000023939 STARD5Q9NSY2 213 aa13.4□□□□□ -0.26
RTFDC1-201ENST00000023939 RLIMQ9NVW2 624 aa13.4□□□□□ -0.26
RTFDC1-201ENST00000023939 CEP192Q8TEP8 1941 aa13.39□□□□□ -0.27
RTFDC1-201ENST00000023939 SCN3AQ9NY46 2000 aa13.39□□□□□ -0.27
RTFDC1-201ENST00000023939 A0A1W2PRQ8 180 aa13.39□□□□□ -0.27
RTFDC1-201ENST00000023939 RHPN2P1A8MT19 583 aa13.39□□□□□ -0.27
RTFDC1-201ENST00000023939 ZNF701M0R085 212 aaPredicted RBP13.39□□□□□ -0.27
RTFDC1-201ENST00000023939 FAAHO00519 579 aa13.39□□□□□ -0.27
RTFDC1-201ENST00000023939 FOXS1O43638 330 aa13.39□□□□□ -0.27
RTFDC1-201ENST00000023939 NUDT21O43809 227 aaKnown RBP13.39□□□□□ -0.27
RTFDC1-201ENST00000023939 NSA2O95478 260 aaKnown RBP13.39□□□□□ -0.27
RTFDC1-201ENST00000023939 ADAP00813 363 aa13.39□□□□□ -0.27
RTFDC1-201ENST00000023939 CTSBP07858 339 aa13.39□□□□□ -0.27
RTFDC1-201ENST00000023939 RNH1P13489 461 aaKnown RBP13.39□□□□□ -0.27
RTFDC1-201ENST00000023939 CYP4B1P13584 511 aa13.39□□□□□ -0.27
RTFDC1-201ENST00000023939 EPHA2P29317 976 aa13.39□□□□□ -0.27
RTFDC1-201ENST00000023939 PRKAR1BP31321 381 aa13.39□□□□□ -0.27
RTFDC1-201ENST00000023939 MAP3K8P41279 467 aa13.39□□□□□ -0.27
RTFDC1-201ENST00000023939 CTSKP43235 329 aa13.39□□□□□ -0.27
RTFDC1-201ENST00000023939 CSNK2BP67870 215 aa13.39□□□□□ -0.27
RTFDC1-201ENST00000023939 TEKQ02763 1124 aa13.39□□□□□ -0.27
RTFDC1-201ENST00000023939 DGCR6Q14129 220 aa13.39□□□□□ -0.27
RTFDC1-201ENST00000023939 NR1D2Q14995 579 aa13.39□□□□□ -0.27
RTFDC1-201ENST00000023939 MAD2L1BPQ15013 274 aaPredicted RBP13.39□□□□□ -0.27
RTFDC1-201ENST00000023939 PROX2Q3B8N5 592 aa13.39□□□□□ -0.27
RTFDC1-201ENST00000023939 COMTD1Q86VU5 262 aa13.39□□□□□ -0.27
RTFDC1-201ENST00000023939 CCDC71Q8IV32 467 aaPredicted RBP13.39□□□□□ -0.27
RTFDC1-201ENST00000023939 TAGAPQ8N103 731 aa13.39□□□□□ -0.27
RTFDC1-201ENST00000023939 SLC16A11Q8NCK7 471 aa13.39□□□□□ -0.27
RTFDC1-201ENST00000023939 OR6C4Q8NGE1 309 aa13.39□□□□□ -0.27
RTFDC1-201ENST00000023939 OTUB1Q96FW1 271 aaPredicted RBP13.39□□□□□ -0.27
RTFDC1-201ENST00000023939 STACQ99469 402 aa13.39□□□□□ -0.27
RTFDC1-201ENST00000023939 ARHGDIGQ99819 225 aa13.39□□□□□ -0.27
RTFDC1-201ENST00000023939 ADNPQ9H2P0 1102 aa13.39□□□□□ -0.27
RTFDC1-201ENST00000023939 ANKRA2Q9H9E1 313 aa13.39□□□□□ -0.27
RTFDC1-201ENST00000023939 PDE7BQ9NP56 450 aa13.39□□□□□ -0.27
RTFDC1-201ENST00000023939 DUSP22Q9NRW4 184 aa13.39□□□□□ -0.27
RTFDC1-201ENST00000023939 MAT2BQ9NZL9 334 aa13.39□□□□□ -0.27
RTFDC1-201ENST00000023939 SEMA5BQ9P283 1151 aa13.39□□□□□ -0.27
RTFDC1-201ENST00000023939 TMCC3Q9ULS5 477 aa13.39□□□□□ -0.27
RTFDC1-201ENST00000023939 A4GNTQ9UNA3 340 aa13.39□□□□□ -0.27
RTFDC1-201ENST00000023939 SATB2Q9UPW6 733 aa13.39□□□□□ -0.27
RTFDC1-201ENST00000023939 RNF215Q9Y6U7 377 aa13.39□□□□□ -0.27
RTFDC1-201ENST00000023939 EML5Q05BV3 1969 aa13.39□□□□□ -0.27
RTFDC1-201ENST00000023939 TRBV4-1A0A0J9YWV2 114 aa13.39□□□□□ -0.27
RTFDC1-201ENST00000023939 FAM227AF5H4B4 570 aa13.39□□□□□ -0.27
RTFDC1-201ENST00000023939 B4GAT1O43505 415 aa13.39□□□□□ -0.27
RTFDC1-201ENST00000023939 KIF1CO43896 1103 aaKnown RBP13.39□□□□□ -0.27
RTFDC1-201ENST00000023939 MRPS14O60783 128 aaKnown RBP13.39□□□□□ -0.27
RTFDC1-201ENST00000023939 SDC3O75056 442 aa13.39□□□□□ -0.27
RTFDC1-201ENST00000023939 LDB3O75112 727 aa13.39□□□□□ -0.27
RTFDC1-201ENST00000023939 ZBTB11O95625 1053 aaPredicted RBP13.39□□□□□ -0.27
RTFDC1-201ENST00000023939 ANGPTL1O95841 491 aa13.39□□□□□ -0.27
RTFDC1-201ENST00000023939 ALPPP05187 535 aa13.39□□□□□ -0.27
RTFDC1-201ENST00000023939 GSTT1P30711 240 aa13.39□□□□□ -0.27
RTFDC1-201ENST00000023939 GGT2P36268 569 aa13.39□□□□□ -0.27
RTFDC1-201ENST00000023939 GPR3P46089 330 aa13.39□□□□□ -0.27
RTFDC1-201ENST00000023939 IGLV3-21P80748 117 aaPredicted RBP13.39□□□□□ -0.27
RTFDC1-201ENST00000023939 CHRNEQ04844 493 aa13.39□□□□□ -0.27
RTFDC1-201ENST00000023939 GANABQ14697 944 aaKnown RBP13.39□□□□□ -0.27
RTFDC1-201ENST00000023939 TRMT12Q53H54 448 aaKnown RBP13.39□□□□□ -0.27
RTFDC1-201ENST00000023939 KCTD8Q6ZWB6 473 aa13.39□□□□□ -0.27
RTFDC1-201ENST00000023939 GPR141Q7Z602 305 aa13.39□□□□□ -0.27
RTFDC1-201ENST00000023939 LACC1Q8IV20 430 aa13.39□□□□□ -0.27
RTFDC1-201ENST00000023939 LINC00471Q8N535 108 aa13.39□□□□□ -0.27
RTFDC1-201ENST00000023939 CDRT4Q8N9R6 151 aa13.39□□□□□ -0.27
RTFDC1-201ENST00000023939 OR9Q2Q8NGE9 314 aa13.39□□□□□ -0.27
RTFDC1-201ENST00000023939 PMM1Q92871 262 aa13.39□□□□□ -0.27
RTFDC1-201ENST00000023939 FKBP10Q96AY3 582 aa13.39□□□□□ -0.27
RTFDC1-201ENST00000023939 TMIGD2Q96BF3 282 aa13.39□□□□□ -0.27
RTFDC1-201ENST00000023939 NIPSNAP1Q9BPW8 284 aa13.39□□□□□ -0.27
RTFDC1-201ENST00000023939 DUSP21Q9H596 190 aa13.39□□□□□ -0.27
RTFDC1-201ENST00000023939 MTHFD2LQ9H903 347 aaPredicted RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms