RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Olfr744Q7TRM0 323 aa11.44□□□□□ -0.58
Trim56-201ENSMUST00000054384 IpmkQ7TT16 396 aa11.44□□□□□ -0.58
Trim56-201ENSMUST00000054384 Olfr1461Q8VEV7 312 aa11.44□□□□□ -0.58
Trim56-201ENSMUST00000054384 Eps8l3Q91WL0 600 aa11.44□□□□□ -0.58
Trim56-201ENSMUST00000054384 Gtpbp3Q923K4 492 aa11.44□□□□□ -0.58
Trim56-201ENSMUST00000054384 Fthl17Q99MX2 176 aa11.44□□□□□ -0.58
Trim56-201ENSMUST00000054384 RoraP51448 523 aa11.44□□□□□ -0.58
Trim56-201ENSMUST00000054384 Nell1Q2VWQ2 810 aa11.44□□□□□ -0.58
Trim56-201ENSMUST00000054384 OclnQ61146 521 aa11.44□□□□□ -0.58
Trim56-201ENSMUST00000054384 Acvr1bQ61271 505 aa11.44□□□□□ -0.58
Trim56-201ENSMUST00000054384 Olfr1085Q7TR64 313 aa11.44□□□□□ -0.58
Trim56-201ENSMUST00000054384 C8bQ8BH35 589 aa11.44□□□□□ -0.58
Trim56-201ENSMUST00000054384 Slco2b1Q8BXB6 683 aa11.44□□□□□ -0.58
Trim56-201ENSMUST00000054384 Sacm1lQ9EP69 587 aa11.44□□□□□ -0.58
Trim56-201ENSMUST00000054384 Cd209fD3Z1H5 274 aa11.44□□□□□ -0.58
Trim56-201ENSMUST00000054384 Chrna9G3X8Z7 479 aa11.44□□□□□ -0.58
Trim56-201ENSMUST00000054384 Socs2O35717 198 aa11.44□□□□□ -0.58
Trim56-201ENSMUST00000054384 Prss39O70169 367 aa11.44□□□□□ -0.58
Trim56-201ENSMUST00000054384 Aff3P51827 1254 aa11.44□□□□□ -0.58
Trim56-201ENSMUST00000054384 HgfQ08048 728 aa11.44□□□□□ -0.58
Trim56-201ENSMUST00000054384 Tead4Q62296 427 aa11.44□□□□□ -0.58
Trim56-201ENSMUST00000054384 Mindy2Q6PDI6 601 aa11.44□□□□□ -0.58
Trim56-201ENSMUST00000054384 Med16Q6PGF3 828 aa11.44□□□□□ -0.58
Trim56-201ENSMUST00000054384 Atg5Q99J83 275 aa11.44□□□□□ -0.58
Trim56-201ENSMUST00000054384 Prss56F2YMG0 604 aa11.44□□□□□ -0.58
Trim56-201ENSMUST00000054384 Dok2O70469 412 aa11.44□□□□□ -0.58
Trim56-201ENSMUST00000054384 Zfp26P10076 861 aa11.44□□□□□ -0.58
Trim56-201ENSMUST00000054384 Cd82P40237 266 aa11.44□□□□□ -0.58
Trim56-201ENSMUST00000054384 Gng8P63078 70 aa11.44□□□□□ -0.58
Trim56-201ENSMUST00000054384 Thoc6Q5U4D9 341 aa11.44□□□□□ -0.58
Trim56-201ENSMUST00000054384 Muc19Q6JHY2 733 aa11.44□□□□□ -0.58
Trim56-201ENSMUST00000054384 Arl11Q6P3A9 176 aa11.44□□□□□ -0.58
Trim56-201ENSMUST00000054384 Ces2bQ6PDB7 556 aa11.44□□□□□ -0.58
Trim56-201ENSMUST00000054384 Slc33a1Q99J27 550 aa11.44□□□□□ -0.58
Trim56-201ENSMUST00000054384 Thumpd1Q99J36 350 aaKnown RBP11.44□□□□□ -0.58
Trim56-201ENSMUST00000054384 Ppil3Q9D6L8 161 aa11.44□□□□□ -0.58
Trim56-201ENSMUST00000054384 Pramef25A2ASI9 494 aa11.44□□□□□ -0.58
Trim56-201ENSMUST00000054384 Jmjd7P0C872 316 aa11.44□□□□□ -0.58
Trim56-201ENSMUST00000054384 Cdh10P70408 788 aa11.44□□□□□ -0.58
Trim56-201ENSMUST00000054384 TefmQ5SSK3 364 aaKnown RBP11.44□□□□□ -0.58
Trim56-201ENSMUST00000054384 PgghgQ8BP56 690 aa11.44□□□□□ -0.58
Trim56-201ENSMUST00000054384 Nrip1Q8CBD1 1161 aa11.44□□□□□ -0.58
Trim56-201ENSMUST00000054384 Batf2Q8R1H8 277 aa11.44□□□□□ -0.58
Trim56-201ENSMUST00000054384 Q9D454 513 aa11.44□□□□□ -0.58
Trim56-201ENSMUST00000054384 ChrdQ9Z0E2 948 aa11.44□□□□□ -0.58
Trim56-201ENSMUST00000054384 Gm8765B7ZWJ3 1017 aa11.43□□□□□ -0.58
Trim56-201ENSMUST00000054384 Vmn1r14H3BJ46 303 aa11.43□□□□□ -0.58
Trim56-201ENSMUST00000054384 Gm6803J3QPI8 144 aa11.43□□□□□ -0.58
Trim56-201ENSMUST00000054384 St3gal5O88829 414 aa11.43□□□□□ -0.58
Trim56-201ENSMUST00000054384 Lefty2P57785 368 aa11.43□□□□□ -0.58
Trim56-201ENSMUST00000054384 Gm906Q3V0M1 1017 aa11.43□□□□□ -0.58
Trim56-201ENSMUST00000054384 FcrlbQ5DRQ8 427 aa11.43□□□□□ -0.58
Trim56-201ENSMUST00000054384 Mc2rQ64326 296 aa11.43□□□□□ -0.58
Trim56-201ENSMUST00000054384 Tmem151aQ6GQT5 468 aa11.43□□□□□ -0.58
Trim56-201ENSMUST00000054384 Syt14Q7TN84 555 aa11.43□□□□□ -0.58
Trim56-201ENSMUST00000054384 Tas2r140Q7TQA4 312 aa11.43□□□□□ -0.58
Trim56-201ENSMUST00000054384 Olfr1106Q7TR57 312 aa11.43□□□□□ -0.58
Trim56-201ENSMUST00000054384 Olfr907Q7TRC7 310 aa11.43□□□□□ -0.58
Trim56-201ENSMUST00000054384 JamlQ80UL9 379 aa11.43□□□□□ -0.58
Trim56-201ENSMUST00000054384 Nmral1Q8K2T1 309 aa11.43□□□□□ -0.58
Trim56-201ENSMUST00000054384 Coro6Q920M5 471 aa11.43□□□□□ -0.58
Trim56-201ENSMUST00000054384 Gm17949A0A1B0GRV7 212 aa11.43□□□□□ -0.58
Trim56-201ENSMUST00000054384 P03987 398 aa11.43□□□□□ -0.58
Trim56-201ENSMUST00000054384 Cdk1P11440 297 aa11.43□□□□□ -0.58
Trim56-201ENSMUST00000054384 Ccr5P51682 354 aa11.43□□□□□ -0.58
Trim56-201ENSMUST00000054384 Anxa11P97384 503 aaKnown RBP11.43□□□□□ -0.58
Trim56-201ENSMUST00000054384 Tex10Q3URQ0 928 aaKnown RBP11.43□□□□□ -0.58
Trim56-201ENSMUST00000054384 Jagn1Q5XKN4 183 aa11.43□□□□□ -0.58
Trim56-201ENSMUST00000054384 LctlQ8K1F9 566 aa11.43□□□□□ -0.58
Trim56-201ENSMUST00000054384 Phospho1Q8R2H9 267 aa11.43□□□□□ -0.58
Trim56-201ENSMUST00000054384 Metap1dQ9CPW9 335 aa11.43□□□□□ -0.58
Trim56-201ENSMUST00000054384 Ift22Q9DAI2 185 aa11.43□□□□□ -0.58
Trim56-201ENSMUST00000054384 Olfr1112A2ATA0 318 aa11.43□□□□□ -0.58
Trim56-201ENSMUST00000054384 Mgat4eA6H684 439 aa11.43□□□□□ -0.58
Trim56-201ENSMUST00000054384 Znf551B2RUI1 696 aa11.43□□□□□ -0.58
Trim56-201ENSMUST00000054384 AcadvlP50544 656 aa11.43□□□□□ -0.58
Trim56-201ENSMUST00000054384 PxkQ8BX57 582 aa11.43□□□□□ -0.58
Trim56-201ENSMUST00000054384 Esco2Q8CIB9 592 aaKnown RBP11.43□□□□□ -0.58
Trim56-201ENSMUST00000054384 Rbms2Q8VC70 383 aaKnown RBP11.43□□□□□ -0.58
Trim56-201ENSMUST00000054384 TipinQ91WA1 278 aa11.43□□□□□ -0.58
Trim56-201ENSMUST00000054384 Elp2Q91WG4 831 aaKnown RBP11.43□□□□□ -0.58
Trim56-201ENSMUST00000054384 Mettl18Q9CZ09 362 aa11.43□□□□□ -0.58
Trim56-201ENSMUST00000054384 Ovca2Q9D7E3 225 aa11.43□□□□□ -0.58
Trim56-201ENSMUST00000054384 Topbp1Q6ZQF0 1515 aa11.43□□□□□ -0.58
Trim56-201ENSMUST00000054384 Olfr424E9Q0Q2 315 aa11.43□□□□□ -0.58
Trim56-201ENSMUST00000054384 Ptpn2Q06180 406 aa11.43□□□□□ -0.58
Trim56-201ENSMUST00000054384 Glb1l2Q3UPY5 636 aa11.43□□□□□ -0.58
Trim56-201ENSMUST00000054384 CishQ62225 257 aa11.43□□□□□ -0.58
Trim56-201ENSMUST00000054384 Olfr1387Q8VFA9 311 aa11.43□□□□□ -0.58
Trim56-201ENSMUST00000054384 Gal3st1Q9JHE4 423 aa11.43□□□□□ -0.58
Trim56-201ENSMUST00000054384 ApipQ9WVQ5 241 aa11.43□□□□□ -0.58
Trim56-201ENSMUST00000054384 Tmem131lQ3U3D7 1597 aa11.43□□□□□ -0.58
Trim56-201ENSMUST00000054384 Grk6O70293 576 aa11.43□□□□□ -0.58
Trim56-201ENSMUST00000054384 SirpaP97797 513 aa11.43□□□□□ -0.58
Trim56-201ENSMUST00000054384 Xkr5Q5GH66 676 aa11.43□□□□□ -0.58
Trim56-201ENSMUST00000054384 Slc10a5Q5PT54 434 aa11.43□□□□□ -0.58
Trim56-201ENSMUST00000054384 Ppp5cQ60676 499 aa11.43□□□□□ -0.58
Trim56-201ENSMUST00000054384 Olfr1474Q7TQQ8 314 aa11.43□□□□□ -0.58
Trim56-201ENSMUST00000054384 Olfr437Q8VEV1 310 aa11.43□□□□□ -0.58
Trim56-201ENSMUST00000054384 VasnQ9CZT5 673 aa11.43□□□□□ -0.58
Retrieved 100 of 22,080 RNA–protein pairs in 29.5 ms