RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 VipP32648 170 aa15.99■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Ankdd1bQ14DN9 521 aa15.99■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Havcr1Q5QNS5 305 aa15.99■□□□□ 0.15
Ctcf-201ENSMUST00000005841 EngQ63961 653 aa15.99■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Cdk6Q64261 326 aa15.99■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Pum1Q80U78 1189 aaKnown RBP15.99■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Slc5a7Q8BGY9 580 aa15.99■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Cxcl16Q8BSU2 246 aa15.99■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Vps9d1Q8C190 649 aa15.99■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Csnk1g3Q8C4X2 424 aa15.99■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Hus1bQ8K572 276 aa15.99■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Olfr345Q8VGK4 311 aa15.99■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Arpc3Q9JM76 178 aaKnown RBP15.99■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Gm15446D3Z5Y8 553 aa15.99■□□□□ 0.15
Ctcf-201ENSMUST00000005841 A530032D15RikE9Q422 215 aa15.99■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Fbxw9F8VPX2 458 aa15.99■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Zfp871G5E905 615 aa15.99■□□□□ 0.15
Ctcf-201ENSMUST00000005841 BckdkO55028 412 aa15.99■□□□□ 0.15
Ctcf-201ENSMUST00000005841 CcnkO88874 554 aa15.99■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Cyp17a1P27786 507 aa15.99■□□□□ 0.15
Ctcf-201ENSMUST00000005841 GlaP51569 419 aa15.99■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Slc16a3P57787 470 aa15.99■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Tmem270Q6UJB9 264 aa15.99■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Svs1Q6WIZ7 820 aa15.99■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Pum2Q80U58 1066 aaKnown RBP15.99■□□□□ 0.15
Ctcf-201ENSMUST00000005841 PeloQ80X73 385 aa15.99■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Wfikkn1Q8R0S6 552 aa15.99■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Tspan1Q99J59 240 aa15.99■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Mrpl43Q99N89 183 aa15.99■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Abcg5Q99PE8 652 aa15.99■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Klhl28Q9CR40 571 aa15.99■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Gdpd1Q9CRY7 314 aa15.99■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Dnmt3lQ9CWR8 421 aaKnown RBP15.99■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Olfr701Q9D3U9 316 aa15.99■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Cers5Q9D6K9 414 aa15.99■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Aff4Q9ESC8 1160 aa15.99■□□□□ 0.15
Ctcf-201ENSMUST00000005841 ChmlQ9QZD5 621 aa15.99■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Ighv11-2A0A075B5R8 117 aa15.99■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Gm31371A0A1D5RM70 265 aa15.99■□□□□ 0.15
Ctcf-201ENSMUST00000005841 AccsA2AIG8 502 aa15.99■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Gm21904A8HG57 180 aa15.99■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Trim30bE9PVL6 203 aa15.99■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Gm16494E9Q2Z4 87 aa15.99■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Gm3327F7C9A1 213 aa15.99■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Gm21866J3QMH4 180 aa15.99■□□□□ 0.15
Ctcf-201ENSMUST00000005841 G6pdxQ00612 515 aa15.99■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Cpxcr1Q3V0P1 322 aa15.99■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Adam26bQ6IMH6 699 aa15.99■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Olfr735Q7TRM4 354 aa15.99■□□□□ 0.15
Ctcf-201ENSMUST00000005841 C730034F03RikQ8BGL5 111 aa15.99■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Smyd4Q8BTK5 799 aa15.99■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Ugt2a3Q8BWQ1 534 aa15.99■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Neu4Q8BZL1 478 aa15.99■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Slc38a1Q8K2P7 485 aa15.99■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Abhd17cQ8VCV1 320 aa15.99■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Olfr1461Q8VEV7 312 aa15.99■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Cacng6Q8VHW3 260 aa15.99■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Slamf9Q9D780 285 aa15.99■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Serinc3Q9QZI9 472 aa15.99■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Igkv4-86A0A0G2JGE7 114 aa15.98■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Gm597E9Q8J5 896 aa15.98■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Gpr31F8VQN3 319 aa15.98■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Gm6401L7N2C0 213 aa15.98■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Rfx3P48381 749 aa15.98■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Tia1P52912 386 aaKnown RBP15.98■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Ctbp2P56546 445 aa15.98■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Gm853Q3UNZ2 425 aa15.98■□□□□ 0.15
Ctcf-201ENSMUST00000005841 H2-Q2Q4KN81 360 aa15.98■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Phf21aQ6ZPK0 659 aa15.98■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Tmed3Q78IS1 221 aa15.98■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Mal2Q8BI08 175 aa15.98■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Sec14l4Q8R0F9 403 aa15.98■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Oasl1Q8VI94 511 aa15.98■□□□□ 0.15
Ctcf-201ENSMUST00000005841 CmipQ9D486 773 aa15.98■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Kctd14A0A0U1RNG7 287 aa15.98■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Xlr4aA2BI40 215 aa15.98■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Cdh19E9Q3A7 770 aa15.98■□□□□ 0.15
Ctcf-201ENSMUST00000005841 H2-Q1O19441 368 aa15.98■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Gosr2O35166 212 aa15.98■□□□□ 0.15
Ctcf-201ENSMUST00000005841 CfbP04186 761 aa15.98■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Xlr4cQ3TKR2 215 aa15.98■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Usp30Q3UN04 517 aa15.98■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Elfn2Q68FM6 823 aa15.98■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Q8BL95 290 aa15.98■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Fcf1Q9CTH6 198 aa15.98■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Xlr4bQ9JJQ7 215 aa15.98■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Gm13124A2A752 406 aa15.98■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Srp54bE9PXC0 504 aa15.98■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Gm8180E9PXN0 145 aa15.98■□□□□ 0.15
Ctcf-201ENSMUST00000005841 2610001J05RikF2Z3Y9 59 aa15.98■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Srp54P14576 504 aa15.98■□□□□ 0.15
Ctcf-201ENSMUST00000005841 TsxP70675 144 aa15.98■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Gm11992Q5SS90 291 aa15.98■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Slc26a11Q80ZD3 593 aa15.98■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Fam83aQ8K2P2 436 aa15.98■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Gm45736A0A1B0GS18 427 aa15.97■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Tmem200cJ3QK46 637 aa15.97■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Olfr1249L7MU51 318 aa15.97■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Hes2O54792 157 aa15.97■□□□□ 0.15
Ctcf-201ENSMUST00000005841 Tcf3P15806 651 aa15.97■□□□□ 0.15
Retrieved 100 of 22,080 RNA–protein pairs in 22.3 ms