RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 NFKBIDQ8NI38 313 aa12.28□□□□□ -0.44
PHGDH-221ENST00000641573 LRTOMTQ8WZ04 291 aa12.28□□□□□ -0.44
PHGDH-221ENST00000641573 FGF11Q92914 225 aa12.28□□□□□ -0.44
PHGDH-221ENST00000641573 POP5Q969H6 163 aaKnown RBP12.28□□□□□ -0.44
PHGDH-221ENST00000641573 MVB12AQ96EY5 273 aa12.28□□□□□ -0.44
PHGDH-221ENST00000641573 SEPHS2Q99611 448 aa12.28□□□□□ -0.44
PHGDH-221ENST00000641573 TACO1Q9BSH4 297 aaKnown RBP12.28□□□□□ -0.44
PHGDH-221ENST00000641573 UGT2B28Q9BY64 529 aa12.28□□□□□ -0.44
PHGDH-221ENST00000641573 ASPSCR1Q9BZE9 553 aa12.28□□□□□ -0.44
PHGDH-221ENST00000641573 NRSN2Q9GZP1 204 aa12.28□□□□□ -0.44
PHGDH-221ENST00000641573 SERHL2Q9H4I8 314 aa12.28□□□□□ -0.44
PHGDH-221ENST00000641573 C3orf14Q9HBI5 128 aa12.28□□□□□ -0.44
PHGDH-221ENST00000641573 PRTFDC1Q9NRG1 225 aa12.28□□□□□ -0.44
PHGDH-221ENST00000641573 CDC14AQ9UNH5 594 aa12.28□□□□□ -0.44
PHGDH-221ENST00000641573 MRPS33Q9Y291 106 aaKnown RBP12.28□□□□□ -0.44
PHGDH-221ENST00000641573 TMEM184BQ9Y519 407 aaPredicted RBP12.28□□□□□ -0.44
PHGDH-221ENST00000641573 MAU2Q9Y6X3 613 aa12.28□□□□□ -0.44
PHGDH-221ENST00000641573 KNTC1P50748 2209 aa12.27□□□□□ -0.44
PHGDH-221ENST00000641573 PLOD2O00469 737 aa12.27□□□□□ -0.45
PHGDH-221ENST00000641573 CASQ2O14958 399 aaPredicted RBP12.27□□□□□ -0.45
PHGDH-221ENST00000641573 DSCR3O14972 297 aa12.27□□□□□ -0.45
PHGDH-221ENST00000641573 CTNSO60931 367 aa12.27□□□□□ -0.45
PHGDH-221ENST00000641573 PRKD3O94806 890 aa12.27□□□□□ -0.45
PHGDH-221ENST00000641573 NT5EP21589 574 aa12.27□□□□□ -0.45
PHGDH-221ENST00000641573 MATN1P21941 496 aa12.27□□□□□ -0.45
PHGDH-221ENST00000641573 ACP1P24666 158 aa12.27□□□□□ -0.45
PHGDH-221ENST00000641573 MAGEA8P43361 318 aa12.27□□□□□ -0.45
PHGDH-221ENST00000641573 OR1D4P47884 311 aa12.27□□□□□ -0.45
PHGDH-221ENST00000641573 KHKP50053 298 aa12.27□□□□□ -0.45
PHGDH-221ENST00000641573 CDK6Q00534 326 aa12.27□□□□□ -0.45
PHGDH-221ENST00000641573 CHRNB3Q05901 458 aa12.27□□□□□ -0.45
PHGDH-221ENST00000641573 ERV3-1Q14264 604 aa12.27□□□□□ -0.45
PHGDH-221ENST00000641573 TRIP10Q15642 601 aa12.27□□□□□ -0.45
PHGDH-221ENST00000641573 FAM98BQ52LJ0 330 aaKnown RBP12.27□□□□□ -0.45
PHGDH-221ENST00000641573 ZNF628Q5EBL2 1059 aa12.27□□□□□ -0.45
PHGDH-221ENST00000641573 PHF19Q5T6S3 580 aa12.27□□□□□ -0.45
PHGDH-221ENST00000641573 LPCAT4Q643R3 524 aa12.27□□□□□ -0.45
PHGDH-221ENST00000641573 SLITRK4Q8IW52 837 aa12.27□□□□□ -0.45
PHGDH-221ENST00000641573 SLC30A8Q8IWU4 369 aa12.27□□□□□ -0.45
PHGDH-221ENST00000641573 FAM86B1Q8N7N1 296 aa12.27□□□□□ -0.45
PHGDH-221ENST00000641573 TMEM102Q8N9M5 508 aaPredicted RBP12.27□□□□□ -0.45
PHGDH-221ENST00000641573 NUP43Q8NFH3 380 aa12.27□□□□□ -0.45
PHGDH-221ENST00000641573 OR7G2Q8NG99 324 aa12.27□□□□□ -0.45
PHGDH-221ENST00000641573 RNF145Q96MT1 663 aa12.27□□□□□ -0.45
PHGDH-221ENST00000641573 YIPF2Q9BWQ6 316 aa12.27□□□□□ -0.45
PHGDH-221ENST00000641573 OR51I1Q9H343 314 aa12.27□□□□□ -0.45
PHGDH-221ENST00000641573 A4GALTQ9NPC4 353 aa12.27□□□□□ -0.45
PHGDH-221ENST00000641573 DHCR7Q9UBM7 475 aaKnown RBP12.27□□□□□ -0.45
PHGDH-221ENST00000641573 TRPC4Q9UBN4 977 aa12.27□□□□□ -0.45
PHGDH-221ENST00000641573 RPS6KA6Q9UK32 745 aa12.27□□□□□ -0.45
PHGDH-221ENST00000641573 SAMD4AQ9UPU9 718 aaKnown RBP12.27□□□□□ -0.45
PHGDH-221ENST00000641573 ANGPT4Q9Y264 503 aa12.27□□□□□ -0.45
PHGDH-221ENST00000641573 PCDHGA1Q9Y5H4 931 aa12.27□□□□□ -0.45
PHGDH-221ENST00000641573 ATMQ13315 3056 aa12.26□□□□□ -0.45
PHGDH-221ENST00000641573 C5orf58C9J3I9 102 aa12.26□□□□□ -0.45
PHGDH-221ENST00000641573 D6RAR5 112 aa12.26□□□□□ -0.45
PHGDH-221ENST00000641573 AGRPO00253 132 aa12.26□□□□□ -0.45
PHGDH-221ENST00000641573 UPK1AO00322 258 aa12.26□□□□□ -0.45
PHGDH-221ENST00000641573 HMGN4O00479 90 aa12.26□□□□□ -0.45
PHGDH-221ENST00000641573 CLDN4O14493 209 aa12.26□□□□□ -0.45
PHGDH-221ENST00000641573 TPST1O60507 370 aa12.26□□□□□ -0.45
PHGDH-221ENST00000641573 RFPL3O75679 317 aa12.26□□□□□ -0.45
PHGDH-221ENST00000641573 ZNF682O95780 498 aa12.26□□□□□ -0.45
PHGDH-221ENST00000641573 ATP1B1P05026 303 aa12.26□□□□□ -0.45
PHGDH-221ENST00000641573 GP1BAP07359 652 aa12.26□□□□□ -0.45
PHGDH-221ENST00000641573 SLC35E2P0CK97 266 aa12.26□□□□□ -0.45
PHGDH-221ENST00000641573 ATXN8OSP0DMR3 200 aa12.26□□□□□ -0.45
PHGDH-221ENST00000641573 OR12D1P0DN82 309 aa12.26□□□□□ -0.45
PHGDH-221ENST00000641573 RAP2AP10114 183 aa12.26□□□□□ -0.45
PHGDH-221ENST00000641573 FCGR1AP12314 374 aa12.26□□□□□ -0.45
PHGDH-221ENST00000641573 FASP25445 335 aa12.26□□□□□ -0.45
PHGDH-221ENST00000641573 AQP1P29972 269 aa12.26□□□□□ -0.45
PHGDH-221ENST00000641573 XCR1P46094 333 aa12.26□□□□□ -0.45
PHGDH-221ENST00000641573 ANXA11P50995 505 aaKnown RBP12.26□□□□□ -0.45
PHGDH-221ENST00000641573 MRPS35P82673 323 aaKnown RBP12.26□□□□□ -0.45
PHGDH-221ENST00000641573 TLE3Q04726 772 aa12.26□□□□□ -0.45
PHGDH-221ENST00000641573 TARDBPQ13148 414 aaKnown RBP eCLIP12.26□□□□□ -0.45
PHGDH-221ENST00000641573 SLC13A2Q13183 592 aa12.26□□□□□ -0.45
PHGDH-221ENST00000641573 LASP1Q14847 261 aaKnown RBP12.26□□□□□ -0.45
PHGDH-221ENST00000641573 NKG7Q16617 165 aa12.26□□□□□ -0.45
PHGDH-221ENST00000641573 INTS11Q5TA45 600 aaKnown RBP12.26□□□□□ -0.45
PHGDH-221ENST00000641573 HMBOX1Q6NT76 420 aa12.26□□□□□ -0.45
PHGDH-221ENST00000641573 FAM111BQ6SJ93 734 aa12.26□□□□□ -0.45
PHGDH-221ENST00000641573 CBLL1Q75N03 491 aa12.26□□□□□ -0.45
PHGDH-221ENST00000641573 CCDC80Q76M96 950 aa12.26□□□□□ -0.45
PHGDH-221ENST00000641573 AMIGO2Q86SJ2 522 aa12.26□□□□□ -0.45
PHGDH-221ENST00000641573 GALNT10Q86SR1 603 aa12.26□□□□□ -0.45
PHGDH-221ENST00000641573 TMEM126BQ8IUX1 230 aa12.26□□□□□ -0.45
PHGDH-221ENST00000641573 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.26□□□□□ -0.45
PHGDH-221ENST00000641573 RAB8BQ92930 207 aa12.26□□□□□ -0.45
PHGDH-221ENST00000641573 PPWD1Q96BP3 646 aaKnown RBP12.26□□□□□ -0.45
PHGDH-221ENST00000641573 SLC47A1Q96FL8 570 aa12.26□□□□□ -0.45
PHGDH-221ENST00000641573 WBP1Q96G27 269 aa12.26□□□□□ -0.45
PHGDH-221ENST00000641573 C16orf58Q96GQ5 468 aa12.26□□□□□ -0.45
PHGDH-221ENST00000641573 PYURFQ96I23 114 aa12.26□□□□□ -0.45
PHGDH-221ENST00000641573 OR6C1Q96RD1 312 aa12.26□□□□□ -0.45
PHGDH-221ENST00000641573 YIPF4Q9BSR8 244 aa12.26□□□□□ -0.45
PHGDH-221ENST00000641573 CHID1Q9BWS9 393 aa12.26□□□□□ -0.45
PHGDH-221ENST00000641573 ANKRA2Q9H9E1 313 aa12.26□□□□□ -0.45
PHGDH-221ENST00000641573 DDX18Q9NVP1 670 aaKnown RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms