RNA–Protein interactions for RNA: ENST00000640482.1

VEGFA-230, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,065 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-230ENST00000640482 CRHR1P34998 444 aa23.16■■□□□ 1.3
VEGFA-230ENST00000640482 FBXW4P57775 412 aa23.16■■□□□ 1.3
VEGFA-230ENST00000640482 RAE1P78406 368 aaKnown RBP23.16■■□□□ 1.3
VEGFA-230ENST00000640482 MGAT2Q10469 447 aa23.16■■□□□ 1.3
VEGFA-230ENST00000640482 HEPACAMQ14CZ8 416 aa23.16■■□□□ 1.3
VEGFA-230ENST00000640482 CFAP157Q5JU67 520 aa23.16■■□□□ 1.3
VEGFA-230ENST00000640482 ACAD11Q709F0 780 aa23.16■■□□□ 1.3
VEGFA-230ENST00000640482 SAMD14Q8IZD0 417 aaPredicted RBP23.16■■□□□ 1.3
VEGFA-230ENST00000640482 CCDC63Q8NA47 563 aa23.16■■□□□ 1.3
VEGFA-230ENST00000640482 RDH11Q8TC12 318 aa23.16■■□□□ 1.3
VEGFA-230ENST00000640482 SPPL2AQ8TCT8 520 aa23.16■■□□□ 1.3
VEGFA-230ENST00000640482 CNRIP1Q96F85 164 aaPredicted RBP23.16■■□□□ 1.3
VEGFA-230ENST00000640482 APIPQ96GX9 242 aa23.16■■□□□ 1.3
VEGFA-230ENST00000640482 ZNF681Q96N22 645 aa23.16■■□□□ 1.3
VEGFA-230ENST00000640482 HEY2Q9UBP5 337 aa23.16■■□□□ 1.3
VEGFA-230ENST00000640482 ACAD8Q9UKU7 415 aa23.16■■□□□ 1.3
VEGFA-230ENST00000640482 LRRC3CA6NJW4 275 aa23.15■■□□□ 1.3
VEGFA-230ENST00000640482 COPEO14579 308 aa23.15■■□□□ 1.3
VEGFA-230ENST00000640482 PLIN3O60664 434 aa23.15■■□□□ 1.3
VEGFA-230ENST00000640482 CDH16O75309 829 aa23.15■■□□□ 1.3
VEGFA-230ENST00000640482 CRCPO75575 148 aa23.15■■□□□ 1.3
VEGFA-230ENST00000640482 SNRPB2P08579 225 aaKnown RBP23.15■■□□□ 1.3
VEGFA-230ENST00000640482 RFPL3SP0C7P2 107 aa23.15■■□□□ 1.3
VEGFA-230ENST00000640482 ACVR2AP27037 513 aa23.15■■□□□ 1.3
VEGFA-230ENST00000640482 GSTM5P46439 218 aa23.15■■□□□ 1.3
VEGFA-230ENST00000640482 NAGLUP54802 743 aa23.15■■□□□ 1.3
VEGFA-230ENST00000640482 DNAJB13P59910 316 aa23.15■■□□□ 1.3
VEGFA-230ENST00000640482 EXOSC7Q15024 291 aaKnown RBP23.15■■□□□ 1.3
VEGFA-230ENST00000640482 WLSQ5T9L3 541 aa23.15■■□□□ 1.3
VEGFA-230ENST00000640482 ZNF585AQ6P3V2 769 aa23.15■■□□□ 1.3
VEGFA-230ENST00000640482 FRMD7Q6ZUT3 714 aa23.15■■□□□ 1.3
VEGFA-230ENST00000640482 ADCY4Q8NFM4 1077 aa23.15■■□□□ 1.3
VEGFA-230ENST00000640482 EPS8L3Q8TE67 593 aaKnown RBP23.15■■□□□ 1.3
VEGFA-230ENST00000640482 CTHRC1Q96CG8 243 aa23.15■■□□□ 1.3
VEGFA-230ENST00000640482 NXF5Q9H1B4 397 aaKnown RBP23.15■■□□□ 1.3
VEGFA-230ENST00000640482 GIMAP4Q9NUV9 329 aa23.15■■□□□ 1.3
VEGFA-230ENST00000640482 PRODH2Q9UF12 536 aa23.15■■□□□ 1.3
VEGFA-230ENST00000640482 DTX4Q9Y2E6 619 aa23.15■■□□□ 1.3
VEGFA-230ENST00000640482 EML6Q6ZMW3 1958 aa23.14■■□□□ 1.3
VEGFA-230ENST00000640482 C19orf84I3L1E1 186 aa23.14■■□□□ 1.29
VEGFA-230ENST00000640482 UBFD1O14562 309 aaKnown RBP23.14■■□□□ 1.29
VEGFA-230ENST00000640482 TRIM3O75382 744 aaPredicted RBP23.14■■□□□ 1.29
VEGFA-230ENST00000640482 SNX4O95219 450 aa23.14■■□□□ 1.29
VEGFA-230ENST00000640482 ABCD3P28288 659 aa23.14■■□□□ 1.29
VEGFA-230ENST00000640482 CHRNB4P30926 498 aa23.14■■□□□ 1.29
VEGFA-230ENST00000640482 DUSP2Q05923 314 aa23.14■■□□□ 1.29
VEGFA-230ENST00000640482 BTKQ06187 659 aa23.14■■□□□ 1.29
VEGFA-230ENST00000640482 PMPCAQ10713 525 aa23.14■■□□□ 1.29
VEGFA-230ENST00000640482 IMPG1Q17R60 797 aa23.14■■□□□ 1.29
VEGFA-230ENST00000640482 SPDYAQ5MJ70 313 aa23.14■■□□□ 1.29
VEGFA-230ENST00000640482 FAM180BQ6P0A1 224 aa23.14■■□□□ 1.29
VEGFA-230ENST00000640482 GALNT18Q6P9A2 607 aa23.14■■□□□ 1.29
VEGFA-230ENST00000640482 SCIMPQ6UWF3 145 aa23.14■■□□□ 1.29
VEGFA-230ENST00000640482 GDF7Q7Z4P5 450 aa23.14■■□□□ 1.29
VEGFA-230ENST00000640482 PRR22Q8IZ63 422 aa23.14■■□□□ 1.29
VEGFA-230ENST00000640482 LIX1Q8N485 282 aa23.14■■□□□ 1.29
VEGFA-230ENST00000640482 OR52R1Q8NGF1 315 aa23.14■■□□□ 1.29
VEGFA-230ENST00000640482 C16orf78Q8WTQ4 265 aa23.14■■□□□ 1.29
VEGFA-230ENST00000640482 HSPBAP1Q96EW2 488 aa23.14■■□□□ 1.29
VEGFA-230ENST00000640482 LCORQ96JN0 433 aaPredicted RBP23.14■■□□□ 1.29
VEGFA-230ENST00000640482 ITPAQ9BY32 194 aa23.14■■□□□ 1.29
VEGFA-230ENST00000640482 ACKR4Q9NPB9 350 aa23.14■■□□□ 1.29
VEGFA-230ENST00000640482 SIRT5Q9NXA8 310 aa23.14■■□□□ 1.29
VEGFA-230ENST00000640482 MID2Q9UJV3 735 aa23.14■■□□□ 1.29
VEGFA-230ENST00000640482 TEX15Q9BXT5 2789 aa23.13■■□□□ 1.29
VEGFA-230ENST00000640482 NOTCH2Q04721 2471 aa23.13■■□□□ 1.29
VEGFA-230ENST00000640482 ACOX3O15254 700 aa23.13■■□□□ 1.29
VEGFA-230ENST00000640482 WDR1O75083 606 aa23.13■■□□□ 1.29
VEGFA-230ENST00000640482 BCAS2O75934 225 aaPredicted RBP23.13■■□□□ 1.29
VEGFA-230ENST00000640482 CBX7O95931 251 aa23.13■■□□□ 1.29
VEGFA-230ENST00000640482 ANXA4P09525 319 aaPredicted RBP23.13■■□□□ 1.29
VEGFA-230ENST00000640482 PCSK2P16519 638 aa23.13■■□□□ 1.29
VEGFA-230ENST00000640482 NAGAP17050 411 aa23.13■■□□□ 1.29
VEGFA-230ENST00000640482 KRT4P19013 534 aa23.13■■□□□ 1.29
VEGFA-230ENST00000640482 GDF1P27539 372 aa23.13■■□□□ 1.29
VEGFA-230ENST00000640482 FOXA1P55317 472 aa23.13■■□□□ 1.29
VEGFA-230ENST00000640482 DCAF7P61962 342 aa23.13■■□□□ 1.29
VEGFA-230ENST00000640482 LTB4RQ15722 352 aa23.13■■□□□ 1.29
VEGFA-230ENST00000640482 PACS2Q86VP3 889 aa23.13■■□□□ 1.29
VEGFA-230ENST00000640482 CCDC116Q8IYX3 515 aa23.13■■□□□ 1.29
VEGFA-230ENST00000640482 RPRMLQ8N4K4 120 aa23.13■■□□□ 1.29
VEGFA-230ENST00000640482 ZNF675Q8TD23 568 aa23.13■■□□□ 1.29
VEGFA-230ENST00000640482 EXOSC8Q96B26 276 aaKnown RBP23.13■■□□□ 1.29
VEGFA-230ENST00000640482 RILPQ96NA2 401 aa23.13■■□□□ 1.29
VEGFA-230ENST00000640482 EBPLQ9BY08 206 aa23.13■■□□□ 1.29
VEGFA-230ENST00000640482 ANGPTL4Q9BY76 406 aa23.13■■□□□ 1.29
VEGFA-230ENST00000640482 SHCBP1LQ9BZQ2 653 aa23.13■■□□□ 1.29
VEGFA-230ENST00000640482 TNFRSF10DQ9UBN6 386 aa23.13■■□□□ 1.29
VEGFA-230ENST00000640482 RNF6Q9Y252 685 aa23.13■■□□□ 1.29
VEGFA-230ENST00000640482 PLLPQ9Y342 182 aa23.13■■□□□ 1.29
VEGFA-230ENST00000640482 PPM1BO75688 479 aa23.12■■□□□ 1.29
VEGFA-230ENST00000640482 CPA3P15088 417 aa23.12■■□□□ 1.29
VEGFA-230ENST00000640482 MASP1P48740 699 aa23.12■■□□□ 1.29
VEGFA-230ENST00000640482 NUP107P57740 925 aa23.12■■□□□ 1.29
VEGFA-230ENST00000640482 DUSP8Q13202 625 aa23.12■■□□□ 1.29
VEGFA-230ENST00000640482 NNATQ16517 81 aa23.12■■□□□ 1.29
VEGFA-230ENST00000640482 TRMT12Q53H54 448 aaKnown RBP23.12■■□□□ 1.29
VEGFA-230ENST00000640482 ZNF628Q5EBL2 1059 aa23.12■■□□□ 1.29
VEGFA-230ENST00000640482 B3GNT6Q6ZMB0 384 aa23.12■■□□□ 1.29
VEGFA-230ENST00000640482 SRRM1Q8IYB3 904 aaKnown RBP23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms