RNA–Protein interactions for RNA: ENST00000640306.1

HNRNPU-228, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-228ENST00000640306 ARRDC3Q96B67 414 aa15.62■□□□□ 0.09
HNRNPU-228ENST00000640306 OTULINQ96BN8 352 aa15.62■□□□□ 0.09
HNRNPU-228ENST00000640306 RNF31Q96EP0 1072 aa15.62■□□□□ 0.09
HNRNPU-228ENST00000640306 COQ10AQ96MF6 247 aa15.62■□□□□ 0.09
HNRNPU-228ENST00000640306 EQTNQ9NQ60 294 aa15.62■□□□□ 0.09
HNRNPU-228ENST00000640306 COL4A6Q14031 1691 aa15.62■□□□□ 0.09
HNRNPU-228ENST00000640306 SCAMP1O15126 338 aa15.62■□□□□ 0.09
HNRNPU-228ENST00000640306 MOSPD3O75425 235 aa15.62■□□□□ 0.09
HNRNPU-228ENST00000640306 ALDH6A1Q02252 535 aaKnown RBP15.62■□□□□ 0.09
HNRNPU-228ENST00000640306 PLPP4Q5VZY2 271 aa15.62■□□□□ 0.09
HNRNPU-228ENST00000640306 CNKSR3Q6P9H4 555 aa15.62■□□□□ 0.09
HNRNPU-228ENST00000640306 NLGN4YQ8NFZ3 816 aaPredicted RBP15.62■□□□□ 0.09
HNRNPU-228ENST00000640306 UBE2E3Q969T4 207 aa15.62■□□□□ 0.09
HNRNPU-228ENST00000640306 NXPE3Q969Y0 559 aa15.62■□□□□ 0.09
HNRNPU-228ENST00000640306 RAD51AP1Q96B01 352 aa15.62■□□□□ 0.09
HNRNPU-228ENST00000640306 RNFT2Q96EX2 444 aa15.62■□□□□ 0.09
HNRNPU-228ENST00000640306 MS4A8Q9BY19 250 aa15.62■□□□□ 0.09
HNRNPU-228ENST00000640306 ZBP1Q9H171 429 aa15.62■□□□□ 0.09
HNRNPU-228ENST00000640306 TCF20Q9UGU0 1960 aaKnown RBP15.62■□□□□ 0.09
HNRNPU-228ENST00000640306 MYO10Q9HD67 2058 aa15.62■□□□□ 0.09
HNRNPU-228ENST00000640306 RGS13O14921 159 aa15.61■□□□□ 0.09
HNRNPU-228ENST00000640306 LCMT2O60294 686 aaKnown RBP15.61■□□□□ 0.09
HNRNPU-228ENST00000640306 RHOP08100 348 aa15.61■□□□□ 0.09
HNRNPU-228ENST00000640306 ST8SIA6P61647 398 aa15.61■□□□□ 0.09
HNRNPU-228ENST00000640306 GLYR1Q49A26 553 aaPredicted RBP15.61■□□□□ 0.09
HNRNPU-228ENST00000640306 LILRA6Q6PI73 481 aa15.61■□□□□ 0.09
HNRNPU-228ENST00000640306 B3GLCTQ6Y288 498 aa15.61■□□□□ 0.09
HNRNPU-228ENST00000640306 CCDC149Q6ZUS6 474 aa15.61■□□□□ 0.09
HNRNPU-228ENST00000640306 SLC35G5Q96KT7 338 aa15.61■□□□□ 0.09
HNRNPU-228ENST00000640306 KATNB1Q9BVA0 655 aa15.61■□□□□ 0.09
HNRNPU-228ENST00000640306 TMED9Q9BVK6 235 aa15.61■□□□□ 0.09
HNRNPU-228ENST00000640306 TRMT61BQ9BVS5 477 aaKnown RBP15.61■□□□□ 0.09
HNRNPU-228ENST00000640306 HDHD5Q9BXW7 423 aa15.61■□□□□ 0.09
HNRNPU-228ENST00000640306 ZCCHC2Q9C0B9 1178 aaKnown RBP15.61■□□□□ 0.09
HNRNPU-228ENST00000640306 SLC22A4Q9H015 551 aa15.61■□□□□ 0.09
HNRNPU-228ENST00000640306 XKR8Q9H6D3 395 aa15.61■□□□□ 0.09
HNRNPU-228ENST00000640306 TBC1D17Q9HA65 648 aa15.61■□□□□ 0.09
HNRNPU-228ENST00000640306 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.61■□□□□ 0.09
HNRNPU-228ENST00000640306 MAN2C1Q9NTJ4 1040 aa15.61■□□□□ 0.09
HNRNPU-228ENST00000640306 SNX7Q9UNH6 387 aa15.61■□□□□ 0.09
HNRNPU-228ENST00000640306 GRIP1Q9Y3R0 1128 aa15.61■□□□□ 0.09
HNRNPU-228ENST00000640306 CLCA3PQ9Y6N3 262 aa15.61■□□□□ 0.09
HNRNPU-228ENST00000640306 DENND4CQ5VZ89 1909 aa15.61■□□□□ 0.09
HNRNPU-228ENST00000640306 KIAA1671Q9BY89 1806 aa15.61■□□□□ 0.09
HNRNPU-228ENST00000640306 PDE9AO76083 593 aa15.61■□□□□ 0.09
HNRNPU-228ENST00000640306 EPPINO95925 133 aa15.61■□□□□ 0.09
HNRNPU-228ENST00000640306 PTPN2P17706 415 aa15.61■□□□□ 0.09
HNRNPU-228ENST00000640306 ENDOUP21128 410 aaKnown RBP15.61■□□□□ 0.09
HNRNPU-228ENST00000640306 MYL9P24844 172 aa15.61■□□□□ 0.09
HNRNPU-228ENST00000640306 KIR2DL3P43628 341 aa15.61■□□□□ 0.09
HNRNPU-228ENST00000640306 UBE3AQ05086 875 aa15.61■□□□□ 0.09
HNRNPU-228ENST00000640306 CCDC85BQ15834 202 aaPredicted RBP15.61■□□□□ 0.09
HNRNPU-228ENST00000640306 Q5BKY6 102 aa15.61■□□□□ 0.09
HNRNPU-228ENST00000640306 KIF18BQ86Y91 864 aa15.61■□□□□ 0.09
HNRNPU-228ENST00000640306 FBXO15Q8NCQ5 510 aaPredicted RBP15.61■□□□□ 0.09
HNRNPU-228ENST00000640306 SETD6Q8TBK2 473 aa15.61■□□□□ 0.09
HNRNPU-228ENST00000640306 ZG16BQ96DA0 208 aa15.61■□□□□ 0.09
HNRNPU-228ENST00000640306 KCTD7Q96MP8 289 aa15.61■□□□□ 0.09
HNRNPU-228ENST00000640306 GLIPR2Q9H4G4 154 aa15.61■□□□□ 0.09
HNRNPU-228ENST00000640306 C11orf49Q9H6J7 331 aa15.61■□□□□ 0.09
HNRNPU-228ENST00000640306 NEUROD4Q9HD90 331 aa15.61■□□□□ 0.09
HNRNPU-228ENST00000640306 NDRG2Q9UN36 371 aaKnown RBP15.61■□□□□ 0.09
HNRNPU-228ENST00000640306 KCNE3Q9Y6H6 103 aa15.61■□□□□ 0.09
HNRNPU-228ENST00000640306 TSPAN11A1L157 253 aa15.61■□□□□ 0.09
HNRNPU-228ENST00000640306 B4DXG7 233 aa15.61■□□□□ 0.09
HNRNPU-228ENST00000640306 HOXB3P14651 431 aaPredicted RBP15.61■□□□□ 0.09
HNRNPU-228ENST00000640306 ITGB7P26010 798 aa15.61■□□□□ 0.09
HNRNPU-228ENST00000640306 MAPK9P45984 424 aa15.61■□□□□ 0.09
HNRNPU-228ENST00000640306 MAN2A2P49641 1150 aa15.61■□□□□ 0.09
HNRNPU-228ENST00000640306 NCBP2P52298 156 aaKnown RBP eCLIP15.61■□□□□ 0.093e-12■■■■□ 22.6
HNRNPU-228ENST00000640306 FABP5Q01469 135 aa15.61■□□□□ 0.09
HNRNPU-228ENST00000640306 P2RY14Q15391 338 aa15.61■□□□□ 0.09
HNRNPU-228ENST00000640306 GPAT3Q53EU6 434 aa15.61■□□□□ 0.09
HNRNPU-228ENST00000640306 FBXO46Q6PJ61 603 aaPredicted RBP15.61■□□□□ 0.09
HNRNPU-228ENST00000640306 GDPGP1Q6ZNW5 385 aa15.61■□□□□ 0.09
HNRNPU-228ENST00000640306 SLC30A8Q8IWU4 369 aa15.61■□□□□ 0.09
HNRNPU-228ENST00000640306 ZBED6CLQ96FA7 236 aaPredicted RBP15.61■□□□□ 0.09
HNRNPU-228ENST00000640306 C16orf58Q96GQ5 468 aa15.61■□□□□ 0.09
HNRNPU-228ENST00000640306 LRRC3BQ96PB8 259 aa15.61■□□□□ 0.09
HNRNPU-228ENST00000640306 AIF1LQ9BQI0 150 aa15.61■□□□□ 0.09
HNRNPU-228ENST00000640306 OR52A5Q9H2C5 316 aa15.61■□□□□ 0.09
HNRNPU-228ENST00000640306 P2RX2Q9UBL9 471 aa15.61■□□□□ 0.09
HNRNPU-228ENST00000640306 NTNG1Q9Y2I2 539 aa15.61■□□□□ 0.09
HNRNPU-228ENST00000640306 IQCMA0A1B0GVH7 501 aa15.6■□□□□ 0.09
HNRNPU-228ENST00000640306 SLC35F4A4IF30 521 aa15.6■□□□□ 0.09
HNRNPU-228ENST00000640306 FAM172BPA6NC97 362 aa15.6■□□□□ 0.09
HNRNPU-228ENST00000640306 CASKO14936 926 aa15.6■□□□□ 0.09
HNRNPU-228ENST00000640306 LALBAP00709 142 aa15.6■□□□□ 0.09
HNRNPU-228ENST00000640306 CHRM4P08173 479 aa15.6■□□□□ 0.09
HNRNPU-228ENST00000640306 NR2F6P10588 404 aa15.6■□□□□ 0.09
HNRNPU-228ENST00000640306 PCBP4P57723 403 aaKnown RBP15.6■□□□□ 0.09
HNRNPU-228ENST00000640306 RAB25P57735 213 aa15.6■□□□□ 0.09
HNRNPU-228ENST00000640306 ERVFC1P60507 584 aa15.6■□□□□ 0.09
HNRNPU-228ENST00000640306 TCEA2Q15560 299 aa15.6■□□□□ 0.09
HNRNPU-228ENST00000640306 DDI2Q5TDH0 399 aa15.6■□□□□ 0.09
HNRNPU-228ENST00000640306 TBC1D19Q8N5T2 526 aa15.6■□□□□ 0.09
HNRNPU-228ENST00000640306 OR4F15Q8NGB8 312 aa15.6■□□□□ 0.09
HNRNPU-228ENST00000640306 ENKURQ8TC29 256 aa15.6■□□□□ 0.09
HNRNPU-228ENST00000640306 NFKBIL1Q9UBC1 381 aaPredicted RBP15.6■□□□□ 0.09
HNRNPU-228ENST00000640306 DIMT1Q9UNQ2 313 aaKnown RBP15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms