RNA–Protein interactions for RNA: ENST00000640131.1

SPIN3-236, Transcript of spindlin family member 3, humanhuman

TSL 1 (best)

Gene SPIN3, Length 2,938 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-236ENST00000640131 CPPED1Q9BRF8 314 aaPredicted RBP11.74□□□□□ -0.53
SPIN3-236ENST00000640131 CCM2Q9BSQ5 444 aa11.74□□□□□ -0.53
SPIN3-236ENST00000640131 DPCDQ9BVM2 203 aaPredicted RBP11.74□□□□□ -0.53
SPIN3-236ENST00000640131 TMEM106CQ9BVX2 250 aa11.74□□□□□ -0.53
SPIN3-236ENST00000640131 VPS29Q9UBQ0 182 aa11.74□□□□□ -0.53
SPIN3-236ENST00000640131 TRAPPC4Q9Y296 219 aa11.74□□□□□ -0.53
SPIN3-236ENST00000640131 MYO10Q9HD67 2058 aa11.74□□□□□ -0.53
SPIN3-236ENST00000640131 TRIM3O75382 744 aaPredicted RBP11.74□□□□□ -0.53
SPIN3-236ENST00000640131 ERN1O75460 977 aaKnown RBP11.74□□□□□ -0.53
SPIN3-236ENST00000640131 SOD1P00441 154 aa11.74□□□□□ -0.53
SPIN3-236ENST00000640131 CATP04040 527 aaKnown RBP11.74□□□□□ -0.53
SPIN3-236ENST00000640131 ALPLP05186 524 aa11.74□□□□□ -0.53
SPIN3-236ENST00000640131 EPHX1P07099 455 aa11.74□□□□□ -0.53
SPIN3-236ENST00000640131 HEXBP07686 556 aa11.74□□□□□ -0.53
SPIN3-236ENST00000640131 MPC1LP0DKB6 136 aa11.74□□□□□ -0.53
SPIN3-236ENST00000640131 CD53P19397 219 aa11.74□□□□□ -0.53
SPIN3-236ENST00000640131 PCP4P48539 62 aa11.74□□□□□ -0.53
SPIN3-236ENST00000640131 ABATP80404 500 aa11.74□□□□□ -0.53
SPIN3-236ENST00000640131 HYAL2Q12891 473 aa11.74□□□□□ -0.53
SPIN3-236ENST00000640131 FGFBP1Q14512 234 aa11.74□□□□□ -0.53
SPIN3-236ENST00000640131 PDE12Q6L8Q7 609 aaKnown RBP11.74□□□□□ -0.53
SPIN3-236ENST00000640131 ZNF480Q8WV37 535 aa11.74□□□□□ -0.53
SPIN3-236ENST00000640131 CMTM7Q96FZ5 175 aa11.74□□□□□ -0.53
SPIN3-236ENST00000640131 UBQLN2Q9UHD9 624 aa11.74□□□□□ -0.53
SPIN3-236ENST00000640131 ACSL6Q9UKU0 697 aa11.74□□□□□ -0.53
SPIN3-236ENST00000640131 SESN1Q9Y6P5 492 aa11.74□□□□□ -0.53
SPIN3-236ENST00000640131 A0A1W2PQ09 198 aa11.73□□□□□ -0.53
SPIN3-236ENST00000640131 hCG_1807616A0A1W2PRN6 198 aa11.73□□□□□ -0.53
SPIN3-236ENST00000640131 H7C2Y5 167 aa11.73□□□□□ -0.53
SPIN3-236ENST00000640131 SLCO2B1O94956 709 aa11.73□□□□□ -0.53
SPIN3-236ENST00000640131 OPN1SWP03999 348 aa11.73□□□□□ -0.53
SPIN3-236ENST00000640131 PCCBP05166 539 aa11.73□□□□□ -0.53
SPIN3-236ENST00000640131 LCKP06239 509 aa11.73□□□□□ -0.53
SPIN3-236ENST00000640131 ANXA4P09525 319 aaPredicted RBP11.73□□□□□ -0.53
SPIN3-236ENST00000640131 ZNF806P0C7X5 589 aa11.73□□□□□ -0.53
SPIN3-236ENST00000640131 UMPSP11172 480 aa11.73□□□□□ -0.53
SPIN3-236ENST00000640131 TNFRSF1BP20333 461 aa11.73□□□□□ -0.53
SPIN3-236ENST00000640131 CSNK2BP67870 215 aa11.73□□□□□ -0.53
SPIN3-236ENST00000640131 DMC1Q14565 340 aa11.73□□□□□ -0.53
SPIN3-236ENST00000640131 ZNF234Q14588 700 aa11.73□□□□□ -0.53
SPIN3-236ENST00000640131 ANKRD54Q6NXT1 300 aa11.73□□□□□ -0.53
SPIN3-236ENST00000640131 FBXO46Q6PJ61 603 aaPredicted RBP11.73□□□□□ -0.53
SPIN3-236ENST00000640131 FAM83HQ6ZRV2 1179 aaPredicted RBP11.73□□□□□ -0.53
SPIN3-236ENST00000640131 NKAIN4Q8IVV8 208 aa11.73□□□□□ -0.53
SPIN3-236ENST00000640131 L3MBTL4Q8NA19 623 aa11.73□□□□□ -0.53
SPIN3-236ENST00000640131 OR5T2Q8NGG2 359 aa11.73□□□□□ -0.53
SPIN3-236ENST00000640131 OR5AK3PQ8NH89 298 aa11.73□□□□□ -0.53
SPIN3-236ENST00000640131 ZNF431Q8TF32 576 aaPredicted RBP11.73□□□□□ -0.53
SPIN3-236ENST00000640131 NUS1Q96E22 293 aa11.73□□□□□ -0.53
SPIN3-236ENST00000640131 MUTYHQ9UIF7 546 aa11.73□□□□□ -0.53
SPIN3-236ENST00000640131 DBX1A6NMT0 343 aa11.73□□□□□ -0.53
SPIN3-236ENST00000640131 CLIC1O00299 241 aa11.73□□□□□ -0.53
SPIN3-236ENST00000640131 PCDHGA12O60330 932 aa11.73□□□□□ -0.53
SPIN3-236ENST00000640131 MT-ND2P03891 347 aa11.73□□□□□ -0.53
SPIN3-236ENST00000640131 TPOP07202 933 aa11.73□□□□□ -0.53
SPIN3-236ENST00000640131 PTPN6P29350 595 aa11.73□□□□□ -0.53
SPIN3-236ENST00000640131 GSTM5P46439 218 aa11.73□□□□□ -0.53
SPIN3-236ENST00000640131 LBX1P52954 281 aa11.73□□□□□ -0.53
SPIN3-236ENST00000640131 RPA4Q13156 261 aa11.73□□□□□ -0.53
SPIN3-236ENST00000640131 GPR19Q15760 415 aa11.73□□□□□ -0.53
SPIN3-236ENST00000640131 BAK1Q16611 211 aa11.73□□□□□ -0.53
SPIN3-236ENST00000640131 TATDN3Q17R31 274 aa11.73□□□□□ -0.53
SPIN3-236ENST00000640131 PAN3Q58A45 887 aaKnown RBP11.73□□□□□ -0.53
SPIN3-236ENST00000640131 CHMP1BQ7LBR1 199 aa11.73□□□□□ -0.53
SPIN3-236ENST00000640131 CELF5Q8N6W0 485 aaKnown RBP11.73□□□□□ -0.53
SPIN3-236ENST00000640131 NLGN4YQ8NFZ3 816 aaPredicted RBP11.73□□□□□ -0.53
SPIN3-236ENST00000640131 CNIH3Q8TBE1 160 aa11.73□□□□□ -0.53
SPIN3-236ENST00000640131 TCEAL3Q969E4 200 aa11.73□□□□□ -0.53
SPIN3-236ENST00000640131 RAB7BQ96AH8 199 aa11.73□□□□□ -0.53
SPIN3-236ENST00000640131 ZNF251Q9BRH9 671 aa11.73□□□□□ -0.53
SPIN3-236ENST00000640131 PAPOLGQ9BWT3 736 aaKnown RBP11.73□□□□□ -0.53
SPIN3-236ENST00000640131 ACTR6Q9GZN1 396 aa11.73□□□□□ -0.53
SPIN3-236ENST00000640131 MUC13Q9H3R2 512 aa11.73□□□□□ -0.53
SPIN3-236ENST00000640131 ZNF768Q9H5H4 540 aaKnown RBP11.73□□□□□ -0.53
SPIN3-236ENST00000640131 WBP1LQ9NX94 342 aa11.73□□□□□ -0.53
SPIN3-236ENST00000640131 DEC1Q9P2X7 70 aa11.73□□□□□ -0.53
SPIN3-236ENST00000640131 ALG5Q9Y673 324 aa11.73□□□□□ -0.53
SPIN3-236ENST00000640131 CKAP5Q14008 2032 aa11.73□□□□□ -0.53
SPIN3-236ENST00000640131 SCN2AQ99250 2005 aa11.73□□□□□ -0.53
SPIN3-236ENST00000640131 WASHC1A8K0Z3 465 aa11.73□□□□□ -0.53
SPIN3-236ENST00000640131 RFXAPO00287 272 aa11.73□□□□□ -0.53
SPIN3-236ENST00000640131 HRO43593 1189 aa11.73□□□□□ -0.53
SPIN3-236ENST00000640131 CCNDBP1O95273 360 aa11.73□□□□□ -0.53
SPIN3-236ENST00000640131 ACPPP15309 386 aa11.73□□□□□ -0.53
SPIN3-236ENST00000640131 ZNF8P17098 575 aaPredicted RBP11.73□□□□□ -0.53
SPIN3-236ENST00000640131 CHMP24386 653 aa11.73□□□□□ -0.53
SPIN3-236ENST00000640131 DDX6P26196 483 aaKnown RBP eCLIP11.73□□□□□ -0.53
SPIN3-236ENST00000640131 TIE1P35590 1138 aa11.73□□□□□ -0.53
SPIN3-236ENST00000640131 SLBPQ14493 270 aaKnown RBP eCLIP11.73□□□□□ -0.53
SPIN3-236ENST00000640131 ZC3H12BQ5HYM0 836 aaKnown RBP11.73□□□□□ -0.53
SPIN3-236ENST00000640131 C9orf50Q5SZB4 431 aa11.73□□□□□ -0.53
SPIN3-236ENST00000640131 C9orf64Q5T6V5 341 aa11.73□□□□□ -0.53
SPIN3-236ENST00000640131 ZDHHC20Q5W0Z9 365 aa11.73□□□□□ -0.53
SPIN3-236ENST00000640131 ZNF852Q6ZMS4 543 aa11.73□□□□□ -0.53
SPIN3-236ENST00000640131 KRT74Q7RTS7 529 aa11.73□□□□□ -0.53
SPIN3-236ENST00000640131 SLC16A13Q7RTY0 426 aa11.73□□□□□ -0.53
SPIN3-236ENST00000640131 LSRQ86X29 649 aaPredicted RBP11.73□□□□□ -0.53
SPIN3-236ENST00000640131 ZNF547Q8IVP9 402 aa11.73□□□□□ -0.53
SPIN3-236ENST00000640131 PAPD5Q8NDF8 572 aaKnown RBP11.73□□□□□ -0.53
SPIN3-236ENST00000640131 FGF13Q92913 245 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms