RNA–Protein interactions for RNA: ENST00000639956.1

SPIN3-232, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 2,998 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-232ENST00000639956 TBRG1Q3YBR2 411 aa11.78□□□□□ -0.52
SPIN3-232ENST00000639956 C9orf64Q5T6V5 341 aa11.78□□□□□ -0.52
SPIN3-232ENST00000639956 ZNF793Q6ZN11 406 aa11.78□□□□□ -0.52
SPIN3-232ENST00000639956 ANKRD33Q7Z3H0 272 aa11.78□□□□□ -0.52
SPIN3-232ENST00000639956 VRK2Q86Y07 508 aa11.78□□□□□ -0.52
SPIN3-232ENST00000639956 LINC01555Q8NAE3 123 aa11.78□□□□□ -0.52
SPIN3-232ENST00000639956 OR4F15Q8NGB8 312 aa11.78□□□□□ -0.52
SPIN3-232ENST00000639956 OR2L2Q8NH16 312 aa11.78□□□□□ -0.52
SPIN3-232ENST00000639956 C9orf43Q8TAL5 461 aaPredicted RBP11.78□□□□□ -0.52
SPIN3-232ENST00000639956 CXorf40AQ8TE69 158 aa11.78□□□□□ -0.52
SPIN3-232ENST00000639956 OR5P2Q8WZ92 322 aa11.78□□□□□ -0.52
SPIN3-232ENST00000639956 ZNF354BQ96LW1 612 aa11.78□□□□□ -0.52
SPIN3-232ENST00000639956 ZNF607Q96SK3 696 aa11.78□□□□□ -0.52
SPIN3-232ENST00000639956 TAPBPLQ9BX59 468 aa11.78□□□□□ -0.52
SPIN3-232ENST00000639956 TMEM245Q9H330 911 aa11.78□□□□□ -0.52
SPIN3-232ENST00000639956 C6orf106Q9H6K1 298 aaPredicted RBP11.78□□□□□ -0.52
SPIN3-232ENST00000639956 CERS4Q9HA82 394 aa11.78□□□□□ -0.52
SPIN3-232ENST00000639956 SLC25A19Q9HC21 320 aa11.78□□□□□ -0.52
SPIN3-232ENST00000639956 MBNL1Q9NR56 388 aaKnown RBP11.78□□□□□ -0.52
SPIN3-232ENST00000639956 CRNNQ9UBG3 495 aaPredicted RBP11.78□□□□□ -0.52
SPIN3-232ENST00000639956 RPL36Q9Y3U8 105 aaKnown RBP11.78□□□□□ -0.52
SPIN3-232ENST00000639956 C4orf51C9J302 202 aa11.77□□□□□ -0.52
SPIN3-232ENST00000639956 NDUFS4O43181 175 aa11.77□□□□□ -0.52
SPIN3-232ENST00000639956 CHRM4P08173 479 aa11.77□□□□□ -0.52
SPIN3-232ENST00000639956 KELP23276 732 aa11.77□□□□□ -0.52
SPIN3-232ENST00000639956 APEX1P27695 318 aaKnown RBP11.77□□□□□ -0.52
SPIN3-232ENST00000639956 ATP6V1E1P36543 226 aa11.77□□□□□ -0.52
SPIN3-232ENST00000639956 GIPRP48546 466 aa11.77□□□□□ -0.52
SPIN3-232ENST00000639956 ILKQ13418 452 aa11.77□□□□□ -0.52
SPIN3-232ENST00000639956 ZNF234Q14588 700 aa11.77□□□□□ -0.52
SPIN3-232ENST00000639956 SYT14P1Q58G82 188 aa11.77□□□□□ -0.52
SPIN3-232ENST00000639956 TUBA3EQ6PEY2 450 aa11.77□□□□□ -0.52
SPIN3-232ENST00000639956 UBE3DQ7Z6J8 389 aa11.77□□□□□ -0.52
SPIN3-232ENST00000639956 OR4N5Q8IXE1 308 aa11.77□□□□□ -0.52
SPIN3-232ENST00000639956 APOBEC4Q8WW27 367 aaKnown RBP11.77□□□□□ -0.52
SPIN3-232ENST00000639956 OR8D1Q8WZ84 308 aa11.77□□□□□ -0.52
SPIN3-232ENST00000639956 TP53INP1Q96A56 240 aa11.77□□□□□ -0.52
SPIN3-232ENST00000639956 MAPRE3Q9UPY8 281 aa11.77□□□□□ -0.52
SPIN3-232ENST00000639956 V9GYH0 126 aa11.77□□□□□ -0.52
SPIN3-232ENST00000639956 DENND4CQ5VZ89 1909 aa11.77□□□□□ -0.53
SPIN3-232ENST00000639956 ZC3H12DA2A288 527 aaKnown RBP11.77□□□□□ -0.53
SPIN3-232ENST00000639956 SH3D21A4FU49 640 aa11.77□□□□□ -0.53
SPIN3-232ENST00000639956 KIAA0355O15063 1070 aa11.77□□□□□ -0.53
SPIN3-232ENST00000639956 SLC2A10O95528 541 aa11.77□□□□□ -0.53
SPIN3-232ENST00000639956 PRNPP04156 253 aa11.77□□□□□ -0.53
SPIN3-232ENST00000639956 CLTBP09497 229 aa11.77□□□□□ -0.53
SPIN3-232ENST00000639956 FUT1P19526 365 aa11.77□□□□□ -0.53
SPIN3-232ENST00000639956 GPR4P46093 362 aa11.77□□□□□ -0.53
SPIN3-232ENST00000639956 HTR3AP46098 478 aa11.77□□□□□ -0.53
SPIN3-232ENST00000639956 CAMK1Q14012 370 aa11.77□□□□□ -0.53
SPIN3-232ENST00000639956 LTB4RQ15722 352 aa11.77□□□□□ -0.53
SPIN3-232ENST00000639956 ZNF791Q3KP31 576 aaPredicted RBP11.77□□□□□ -0.53
SPIN3-232ENST00000639956 PDZK1Q5T2W1 519 aa11.77□□□□□ -0.53
SPIN3-232ENST00000639956 SLX4IPQ5VYV7 408 aa11.77□□□□□ -0.53
SPIN3-232ENST00000639956 SLC30A8Q8IWU4 369 aa11.77□□□□□ -0.53
SPIN3-232ENST00000639956 TMEM145Q8NBT3 493 aa11.77□□□□□ -0.53
SPIN3-232ENST00000639956 OR8J1Q8NGP2 316 aa11.77□□□□□ -0.53
SPIN3-232ENST00000639956 ZBED6CLQ96FA7 236 aaPredicted RBP11.77□□□□□ -0.53
SPIN3-232ENST00000639956 PAWRQ96IZ0 340 aaKnown RBP11.77□□□□□ -0.53
SPIN3-232ENST00000639956 METTL2AQ96IZ6 378 aaKnown RBP11.77□□□□□ -0.53
SPIN3-232ENST00000639956 CTRCQ99895 268 aa11.77□□□□□ -0.53
SPIN3-232ENST00000639956 MND1Q9BWT6 205 aa11.77□□□□□ -0.53
SPIN3-232ENST00000639956 ANKHQ9HCJ1 492 aa11.77□□□□□ -0.53
SPIN3-232ENST00000639956 FZD3Q9NPG1 666 aa11.77□□□□□ -0.53
SPIN3-232ENST00000639956 CNOT2Q9NZN8 540 aaKnown RBP11.77□□□□□ -0.53
SPIN3-232ENST00000639956 MGAT4BQ9UQ53 548 aa11.77□□□□□ -0.53
SPIN3-232ENST00000639956 CLCA3PQ9Y6N3 262 aa11.77□□□□□ -0.53
SPIN3-232ENST00000639956 EPPINO95925 133 aa11.76□□□□□ -0.53
SPIN3-232ENST00000639956 CISD3P0C7P0 127 aa11.76□□□□□ -0.53
SPIN3-232ENST00000639956 RFX3P48380 749 aa11.76□□□□□ -0.53
SPIN3-232ENST00000639956 PXNP49023 591 aaPredicted RBP11.76□□□□□ -0.53
SPIN3-232ENST00000639956 CCR8P51685 355 aa11.76□□□□□ -0.53
SPIN3-232ENST00000639956 TAS2R41P59536 307 aa11.76□□□□□ -0.53
SPIN3-232ENST00000639956 SNRPNP63162 240 aaKnown RBP11.76□□□□□ -0.53
SPIN3-232ENST00000639956 LARS2Q15031 903 aaKnown RBP11.76□□□□□ -0.53
SPIN3-232ENST00000639956 ZNF658BQ4V348 819 aaPredicted RBP11.76□□□□□ -0.53
SPIN3-232ENST00000639956 PIP5KL1Q5T9C9 394 aa11.76□□□□□ -0.53
SPIN3-232ENST00000639956 RRM2BQ7LG56 351 aa11.76□□□□□ -0.53
SPIN3-232ENST00000639956 PRICKLE2Q7Z3G6 844 aa11.76□□□□□ -0.53
SPIN3-232ENST00000639956 NUDT13Q86X67 352 aa11.76□□□□□ -0.53
SPIN3-232ENST00000639956 DCUN1D3Q8IWE4 304 aa11.76□□□□□ -0.53
SPIN3-232ENST00000639956 HOMEZQ8IX15 550 aa11.76□□□□□ -0.53
SPIN3-232ENST00000639956 NANOGP1Q8N7R0 232 aa11.76□□□□□ -0.53
SPIN3-232ENST00000639956 OR52P1PQ8NH57 321 aa11.76□□□□□ -0.53
SPIN3-232ENST00000639956 SMAP2Q8WU79 429 aaPredicted RBP11.76□□□□□ -0.53
SPIN3-232ENST00000639956 PIK3R3Q92569 461 aa11.76□□□□□ -0.53
SPIN3-232ENST00000639956 UBE2E3Q969T4 207 aa11.76□□□□□ -0.53
SPIN3-232ENST00000639956 RNFT2Q96EX2 444 aa11.76□□□□□ -0.53
SPIN3-232ENST00000639956 ZNF582Q96NG8 517 aaPredicted RBP11.76□□□□□ -0.53
SPIN3-232ENST00000639956 TTTY10Q9BZA0 68 aa11.76□□□□□ -0.53
SPIN3-232ENST00000639956 NDEL1Q9GZM8 345 aa11.76□□□□□ -0.53
SPIN3-232ENST00000639956 RANGRFQ9HD47 186 aaPredicted RBP11.76□□□□□ -0.53
SPIN3-232ENST00000639956 KCND3Q9UK17 655 aa11.76□□□□□ -0.53
SPIN3-232ENST00000639956 STUB1Q9UNE7 303 aa11.76□□□□□ -0.53
SPIN3-232ENST00000639956 LSM2Q9Y333 95 aaKnown RBP11.76□□□□□ -0.53
SPIN3-232ENST00000639956 ATG4BQ9Y4P1 393 aa11.76□□□□□ -0.53
SPIN3-232ENST00000639956 ALPK2Q86TB3 2170 aa11.76□□□□□ -0.53
SPIN3-232ENST00000639956 SNRNP200O75643 2136 aaKnown RBP11.76□□□□□ -0.53
SPIN3-232ENST00000639956 ARID1BQ8NFD5 2236 aaPredicted RBP11.76□□□□□ -0.53
SPIN3-232ENST00000639956 HRO43593 1189 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms