RNA–Protein interactions for RNA: ENST00000638794.1

SMN2-216, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-216ENST00000638794 PAFAH2Q99487 392 aa15.42■□□□□ 0.06
SMN2-216ENST00000638794 SH3GL2Q99962 352 aa15.42■□□□□ 0.06
SMN2-216ENST00000638794 GPATCH1Q9BRR8 931 aaKnown RBP15.42■□□□□ 0.06
SMN2-216ENST00000638794 BRINP2Q9C0B6 783 aa15.42■□□□□ 0.06
SMN2-216ENST00000638794 PRDM14Q9GZV8 571 aa15.42■□□□□ 0.06
SMN2-216ENST00000638794 NXF5Q9H1B4 397 aaKnown RBP15.42■□□□□ 0.06
SMN2-216ENST00000638794 CDC42EP4Q9H3Q1 356 aaKnown RBP15.42■□□□□ 0.06
SMN2-216ENST00000638794 ELOVL6Q9H5J4 265 aa15.42■□□□□ 0.06
SMN2-216ENST00000638794 FARSBQ9NSD9 589 aaKnown RBP15.42■□□□□ 0.06
SMN2-216ENST00000638794 CRIM1Q9NZV1 1036 aa15.42■□□□□ 0.06
SMN2-216ENST00000638794 CES1P1Q9UKY3 287 aa15.42■□□□□ 0.06
SMN2-216ENST00000638794 SLC12A4Q9UP95 1085 aa15.42■□□□□ 0.06
SMN2-216ENST00000638794 PCDHA9Q9Y5H5 950 aa15.42■□□□□ 0.06
SMN2-216ENST00000638794 PRRC2AP48634 2157 aaKnown RBP15.42■□□□□ 0.06
SMN2-216ENST00000638794 MPDZO75970 2070 aa15.42■□□□□ 0.06
SMN2-216ENST00000638794 PPP6CO00743 305 aa15.41■□□□□ 0.06
SMN2-216ENST00000638794 ABCB1P08183 1280 aaPredicted RBP15.41■□□□□ 0.06
SMN2-216ENST00000638794 RPS17P08708 135 aaKnown RBP15.41■□□□□ 0.06
SMN2-216ENST00000638794 KRT15P19012 456 aa15.41■□□□□ 0.06
SMN2-216ENST00000638794 TIMP3P35625 211 aa15.41■□□□□ 0.06
SMN2-216ENST00000638794 ASCL1P50553 236 aa15.41■□□□□ 0.06
SMN2-216ENST00000638794 RPP38P78345 283 aaKnown RBP15.41■□□□□ 0.06
SMN2-216ENST00000638794 MGAT2Q10469 447 aa15.41■□□□□ 0.06
SMN2-216ENST00000638794 GALNT1Q10472 559 aaPredicted RBP15.41■□□□□ 0.06
SMN2-216ENST00000638794 TOMM20Q15388 145 aa15.41■□□□□ 0.06
SMN2-216ENST00000638794 TSNAXIP1Q2TAA8 658 aa15.41■□□□□ 0.06
SMN2-216ENST00000638794 PRICKLE4Q2TBC4 344 aa15.41■□□□□ 0.06
SMN2-216ENST00000638794 NHSL2Q5HYW2 709 aa15.41■□□□□ 0.06
SMN2-216ENST00000638794 DCST1Q5T197 706 aa15.41■□□□□ 0.06
SMN2-216ENST00000638794 DESI1Q6ICB0 168 aa15.41■□□□□ 0.06
SMN2-216ENST00000638794 SLC48A1Q6P1K1 146 aa15.41■□□□□ 0.06
SMN2-216ENST00000638794 LETMD1Q6P1Q0 360 aa15.41■□□□□ 0.06
SMN2-216ENST00000638794 POMZP3Q6PJE2 187 aa15.41■□□□□ 0.06
SMN2-216ENST00000638794 FAM111BQ6SJ93 734 aa15.41■□□□□ 0.06
SMN2-216ENST00000638794 PM20D2Q8IYS1 436 aa15.41■□□□□ 0.06
SMN2-216ENST00000638794 VWA5B2Q8N398 1253 aa15.41■□□□□ 0.06
SMN2-216ENST00000638794 NTNG2Q96CW9 530 aa15.41■□□□□ 0.06
SMN2-216ENST00000638794 UGT2B28Q9BY64 529 aa15.41■□□□□ 0.06
SMN2-216ENST00000638794 POLDIP3Q9BY77 421 aaKnown RBP15.41■□□□□ 0.06
SMN2-216ENST00000638794 MAT2BQ9NZL9 334 aa15.41■□□□□ 0.06
SMN2-216ENST00000638794 MTRF1LQ9UGC7 380 aaKnown RBP15.41■□□□□ 0.06
SMN2-216ENST00000638794 CAMK2AQ9UQM7 478 aa15.41■□□□□ 0.06
SMN2-216ENST00000638794 ABCA4P78363 2273 aa15.4■□□□□ 0.06
SMN2-216ENST00000638794 C1orf226A1L170 272 aa15.4■□□□□ 0.06
SMN2-216ENST00000638794 GOLGA6L10A6NI86 522 aa15.4■□□□□ 0.06
SMN2-216ENST00000638794 GNB5O14775 395 aa15.4■□□□□ 0.06
SMN2-216ENST00000638794 ERAL1O75616 437 aaKnown RBP15.4■□□□□ 0.06
SMN2-216ENST00000638794 PPM1BO75688 479 aa15.4■□□□□ 0.06
SMN2-216ENST00000638794 PDYNP01213 254 aa15.4■□□□□ 0.06
SMN2-216ENST00000638794 ATP1B1P05026 303 aa15.4■□□□□ 0.06
SMN2-216ENST00000638794 BMP7P18075 431 aa15.4■□□□□ 0.06
SMN2-216ENST00000638794 TSPAN8P19075 237 aa15.4■□□□□ 0.06
SMN2-216ENST00000638794 PTPN6P29350 595 aa15.4■□□□□ 0.06
SMN2-216ENST00000638794 FEN1P39748 380 aaKnown RBP15.4■□□□□ 0.06
SMN2-216ENST00000638794 PEX19P40855 299 aa15.4■□□□□ 0.06
SMN2-216ENST00000638794 SERPINB9P50453 376 aa15.4■□□□□ 0.06
SMN2-216ENST00000638794 ZNF136P52737 540 aa15.4■□□□□ 0.06
SMN2-216ENST00000638794 CDH13P55290 713 aa15.4■□□□□ 0.06
SMN2-216ENST00000638794 EXOSC7Q15024 291 aaKnown RBP15.4■□□□□ 0.06
SMN2-216ENST00000638794 FBXL19-AS1Q494R0 122 aa15.4■□□□□ 0.06
SMN2-216ENST00000638794 EIPR1Q53HC9 387 aa15.4■□□□□ 0.06
SMN2-216ENST00000638794 WIPI1Q5MNZ9 446 aaPredicted RBP15.4■□□□□ 0.06
SMN2-216ENST00000638794 TIGD3Q6B0B8 471 aa15.4■□□□□ 0.06
SMN2-216ENST00000638794 SIMC1Q8NDZ2 872 aa15.4■□□□□ 0.06
SMN2-216ENST00000638794 TRPC4APQ8TEL6 797 aa15.4■□□□□ 0.06
SMN2-216ENST00000638794 ZNF483Q8TF39 744 aaPredicted RBP15.4■□□□□ 0.06
SMN2-216ENST00000638794 SELENOMQ8WWX9 145 aa15.4■□□□□ 0.06
SMN2-216ENST00000638794 RNASE6Q93091 150 aaKnown RBP15.4■□□□□ 0.06
SMN2-216ENST00000638794 HSPBAP1Q96EW2 488 aa15.4■□□□□ 0.06
SMN2-216ENST00000638794 MRPL57Q9BQC6 102 aaKnown RBP15.4■□□□□ 0.06
SMN2-216ENST00000638794 ITPAQ9BY32 194 aa15.4■□□□□ 0.06
SMN2-216ENST00000638794 CLEC4MQ9H2X3 399 aaPredicted RBP15.4■□□□□ 0.06
SMN2-216ENST00000638794 LIME1Q9H400 295 aa15.4■□□□□ 0.06
SMN2-216ENST00000638794 METTL7AQ9H8H3 244 aa15.4■□□□□ 0.06
SMN2-216ENST00000638794 RASSF1Q9NS23 344 aa15.4■□□□□ 0.06
SMN2-216ENST00000638794 ZNF629Q9UEG4 869 aaPredicted RBP15.4■□□□□ 0.06
SMN2-216ENST00000638794 BCAP29Q9UHQ4 241 aa15.4■□□□□ 0.06
SMN2-216ENST00000638794 FAM221AA4D161 298 aa15.39■□□□□ 0.05
SMN2-216ENST00000638794 GUCY1B2O75343 617 aa15.39■□□□□ 0.05
SMN2-216ENST00000638794 OTCP00480 354 aa15.39■□□□□ 0.05
SMN2-216ENST00000638794 IL2RAP01589 272 aa15.39■□□□□ 0.05
SMN2-216ENST00000638794 SBK3P0C264 359 aa15.39■□□□□ 0.05
SMN2-216ENST00000638794 COL6A2P12110 1019 aa15.39■□□□□ 0.05
SMN2-216ENST00000638794 CSNK2A2P19784 350 aaPredicted RBP15.39■□□□□ 0.05
SMN2-216ENST00000638794 DEKP35659 375 aaKnown RBP15.39■□□□□ 0.05
SMN2-216ENST00000638794 SOX18P35713 384 aa15.39■□□□□ 0.05
SMN2-216ENST00000638794 DUSP2Q05923 314 aa15.39■□□□□ 0.05
SMN2-216ENST00000638794 MAP4K2Q12851 820 aa15.39■□□□□ 0.05
SMN2-216ENST00000638794 FLYWCH1Q4VC44 716 aa15.39■□□□□ 0.05
SMN2-216ENST00000638794 NSUN5P2Q63ZY6 315 aa15.39■□□□□ 0.05
SMN2-216ENST00000638794 FAM180BQ6P0A1 224 aa15.39■□□□□ 0.05
SMN2-216ENST00000638794 ANGPTL8Q6UXH0 198 aa15.39■□□□□ 0.05
SMN2-216ENST00000638794 TAOK1Q7L7X3 1001 aa15.39■□□□□ 0.05
SMN2-216ENST00000638794 ADCY4Q8NFM4 1077 aa15.39■□□□□ 0.05
SMN2-216ENST00000638794 OR1J4Q8NGS1 313 aa15.39■□□□□ 0.05
SMN2-216ENST00000638794 NINJ1Q92982 152 aa15.39■□□□□ 0.05
SMN2-216ENST00000638794 HGDQ93099 445 aa15.39■□□□□ 0.05
SMN2-216ENST00000638794 TM4SF18Q96CE8 201 aa15.39■□□□□ 0.05
SMN2-216ENST00000638794 KLHL29Q96CT2 875 aa15.39■□□□□ 0.05
SMN2-216ENST00000638794 OMA1Q96E52 524 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms