RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 UBE2UQ5VVX9 321 aa17.63■□□□□ 0.41
SCARB2-213ENST00000638680 PCDHB16Q9NRJ7 776 aa17.63■□□□□ 0.41
SCARB2-213ENST00000638680 GALTP07902 379 aa17.63■□□□□ 0.41
SCARB2-213ENST00000638680 LSSP48449 732 aa17.63■□□□□ 0.41
SCARB2-213ENST00000638680 GPR143P51810 404 aa17.63■□□□□ 0.41
SCARB2-213ENST00000638680 KEAP1Q14145 624 aa17.63■□□□□ 0.41
SCARB2-213ENST00000638680 NNATQ16517 81 aa17.63■□□□□ 0.41
SCARB2-213ENST00000638680 OR4C11Q6IEV9 310 aa17.63■□□□□ 0.41
SCARB2-213ENST00000638680 LETMD1Q6P1Q0 360 aa17.63■□□□□ 0.41
SCARB2-213ENST00000638680 ARHGAP11AQ6P4F7 1023 aa17.63■□□□□ 0.41
SCARB2-213ENST00000638680 OR52E2Q8NGJ4 325 aa17.63■□□□□ 0.41
SCARB2-213ENST00000638680 FKBP10Q96AY3 582 aa17.63■□□□□ 0.41
SCARB2-213ENST00000638680 BOCQ9BWV1 1114 aa17.63■□□□□ 0.41
SCARB2-213ENST00000638680 GSRP00390 522 aa17.63■□□□□ 0.41
SCARB2-213ENST00000638680 MECP2P51608 486 aaKnown RBP17.63■□□□□ 0.41
SCARB2-213ENST00000638680 RGNQ15493 299 aa17.63■□□□□ 0.41
SCARB2-213ENST00000638680 SPARTQ8N0X7 666 aa17.63■□□□□ 0.41
SCARB2-213ENST00000638680 TMEM156Q8N614 296 aa17.63■□□□□ 0.41
SCARB2-213ENST00000638680 OR4C15Q8NGM1 316 aa17.63■□□□□ 0.41
SCARB2-213ENST00000638680 TRMT10AQ8TBZ6 339 aaKnown RBP17.63■□□□□ 0.41
SCARB2-213ENST00000638680 C16orf78Q8WTQ4 265 aa17.63■□□□□ 0.41
SCARB2-213ENST00000638680 ZDHHC7Q9NXF8 308 aa17.63■□□□□ 0.41
SCARB2-213ENST00000638680 FMN2Q9NZ56 1722 aa17.62■□□□□ 0.41
SCARB2-213ENST00000638680 RETP07949 1114 aa17.62■□□□□ 0.41
SCARB2-213ENST00000638680 AMY2BP19961 511 aa17.62■□□□□ 0.41
SCARB2-213ENST00000638680 CNKSR3Q6P9H4 555 aa17.62■□□□□ 0.41
SCARB2-213ENST00000638680 NAGSQ8N159 534 aa17.62■□□□□ 0.41
SCARB2-213ENST00000638680 SCGB1C1Q8TD33 95 aa17.62■□□□□ 0.41
SCARB2-213ENST00000638680 HS6ST2Q96MM7 605 aa17.62■□□□□ 0.41
SCARB2-213ENST00000638680 IL20RAQ9UHF4 553 aa17.62■□□□□ 0.41
SCARB2-213ENST00000638680 MRPS17Q9Y2R5 130 aaKnown RBP17.62■□□□□ 0.41
SCARB2-213ENST00000638680 E2F3O00716 465 aa17.62■□□□□ 0.41
SCARB2-213ENST00000638680 TMEM205Q6UW68 189 aa17.62■□□□□ 0.41
SCARB2-213ENST00000638680 ZSCAN1Q8NBB4 408 aa17.62■□□□□ 0.41
SCARB2-213ENST00000638680 IRF7Q92985 503 aa17.62■□□□□ 0.41
SCARB2-213ENST00000638680 SGTBQ96EQ0 304 aa17.62■□□□□ 0.41
SCARB2-213ENST00000638680 ZNF597Q96LX8 424 aa17.62■□□□□ 0.41
SCARB2-213ENST00000638680 ACOT13Q9NPJ3 140 aa17.62■□□□□ 0.41
SCARB2-213ENST00000638680 POT1Q9NUX5 634 aa17.62■□□□□ 0.41
SCARB2-213ENST00000638680 WASF3Q9UPY6 502 aa17.62■□□□□ 0.41
SCARB2-213ENST00000638680 CENPBD1B2RD01 187 aa17.62■□□□□ 0.41
SCARB2-213ENST00000638680 TRAPPC6AO75865 159 aa17.62■□□□□ 0.41
SCARB2-213ENST00000638680 SOX3P41225 446 aa17.62■□□□□ 0.41
SCARB2-213ENST00000638680 PLGLB1Q02325 96 aa17.62■□□□□ 0.41
SCARB2-213ENST00000638680 FGFBP1Q14512 234 aa17.62■□□□□ 0.41
SCARB2-213ENST00000638680 LRFN4Q6PJG9 635 aa17.62■□□□□ 0.41
SCARB2-213ENST00000638680 OR4K5Q8NGD3 323 aa17.62■□□□□ 0.41
SCARB2-213ENST00000638680 LMX1AQ8TE12 382 aa17.62■□□□□ 0.41
SCARB2-213ENST00000638680 ECHDC3Q96DC8 303 aa17.62■□□□□ 0.41
SCARB2-213ENST00000638680 MMABQ96EY8 250 aaPredicted RBP17.62■□□□□ 0.41
SCARB2-213ENST00000638680 RAD9AQ99638 391 aa17.62■□□□□ 0.41
SCARB2-213ENST00000638680 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.62■□□□□ 0.41
SCARB2-213ENST00000638680 AGPAT4Q9NRZ5 378 aa17.62■□□□□ 0.41
SCARB2-213ENST00000638680 COPZ2Q9P299 210 aa17.62■□□□□ 0.41
SCARB2-213ENST00000638680 KLHL21Q9UJP4 597 aa17.62■□□□□ 0.41
SCARB2-213ENST00000638680 XRN1Q8IZH2 1706 aaKnown RBP17.62■□□□□ 0.41
SCARB2-213ENST00000638680 GXYLT2A0PJZ3 443 aa17.62■□□□□ 0.41
SCARB2-213ENST00000638680 M0R129 80 aa17.62■□□□□ 0.41
SCARB2-213ENST00000638680 CASRP41180 1078 aa17.62■□□□□ 0.41
SCARB2-213ENST00000638680 GPM6BQ13491 265 aa17.62■□□□□ 0.41
SCARB2-213ENST00000638680 ARL14Q8N4G2 192 aa17.62■□□□□ 0.41
SCARB2-213ENST00000638680 ZNF709Q8N972 641 aa17.62■□□□□ 0.41
SCARB2-213ENST00000638680 SYT14Q8NB59 555 aa17.62■□□□□ 0.41
SCARB2-213ENST00000638680 HRASLS2Q9NWW9 162 aa17.62■□□□□ 0.41
SCARB2-213ENST00000638680 LMO7Q8WWI1 1683 aa17.62■□□□□ 0.41
SCARB2-213ENST00000638680 C9J4A7 227 aa17.62■□□□□ 0.41
SCARB2-213ENST00000638680 PRKXP51817 358 aa17.62■□□□□ 0.41
SCARB2-213ENST00000638680 DEFB134Q4QY38 66 aa17.62■□□□□ 0.41
SCARB2-213ENST00000638680 FAM180BQ6P0A1 224 aa17.62■□□□□ 0.41
SCARB2-213ENST00000638680 PNPLA1Q8N8W4 532 aa17.62■□□□□ 0.41
SCARB2-213ENST00000638680 SMARCD2Q92925 531 aa17.62■□□□□ 0.41
SCARB2-213ENST00000638680 ZNF689Q96CS4 500 aaPredicted RBP17.62■□□□□ 0.41
SCARB2-213ENST00000638680 OR51E2Q9H255 320 aa17.62■□□□□ 0.41
SCARB2-213ENST00000638680 GPN2Q9H9Y4 310 aaPredicted RBP17.62■□□□□ 0.41
SCARB2-213ENST00000638680 PRODH2Q9UF12 536 aa17.62■□□□□ 0.41
SCARB2-213ENST00000638680 ADH1BP00325 375 aa17.61■□□□□ 0.41
SCARB2-213ENST00000638680 GPX3P22352 226 aa17.61■□□□□ 0.41
SCARB2-213ENST00000638680 CD34P28906 385 aa17.61■□□□□ 0.41
SCARB2-213ENST00000638680 HES5Q5TA89 166 aa17.61■□□□□ 0.41
SCARB2-213ENST00000638680 ERN2Q76MJ5 926 aaKnown RBP17.61■□□□□ 0.41
SCARB2-213ENST00000638680 DKKL1Q9UK85 242 aa17.61■□□□□ 0.41
SCARB2-213ENST00000638680 IFT172Q9UG01 1749 aa17.61■□□□□ 0.41
SCARB2-213ENST00000638680 K7ERQ8 282 aa17.61■□□□□ 0.41
SCARB2-213ENST00000638680 CA12O43570 354 aa17.61■□□□□ 0.41
SCARB2-213ENST00000638680 SNAI1O95863 264 aaPredicted RBP17.61■□□□□ 0.41
SCARB2-213ENST00000638680 PAHP00439 452 aa17.61■□□□□ 0.41
SCARB2-213ENST00000638680 PTH2RP49190 550 aa17.61■□□□□ 0.41
SCARB2-213ENST00000638680 GK3PQ14409 553 aa17.61■□□□□ 0.41
SCARB2-213ENST00000638680 SLC22A10Q63ZE4 541 aa17.61■□□□□ 0.41
SCARB2-213ENST00000638680 FIP1L1Q6UN15 594 aaKnown RBP17.61■□□□□ 0.41
SCARB2-213ENST00000638680 IFNL1Q8IU54 200 aa17.61■□□□□ 0.41
SCARB2-213ENST00000638680 KATNBL1Q9H079 304 aa17.61■□□□□ 0.41
SCARB2-213ENST00000638680 ASB6Q9NWX5 421 aa17.61■□□□□ 0.41
SCARB2-213ENST00000638680 TMEM14AQ9Y6G1 99 aa17.61■□□□□ 0.41
SCARB2-213ENST00000638680 ENPP4Q9Y6X5 453 aa17.61■□□□□ 0.41
SCARB2-213ENST00000638680 OR6C74A6NCV1 312 aa17.61■□□□□ 0.41
SCARB2-213ENST00000638680 SOD2P04179 222 aa17.61■□□□□ 0.41
SCARB2-213ENST00000638680 MAP4K2Q12851 820 aa17.61■□□□□ 0.41
SCARB2-213ENST00000638680 GRHL2Q6ISB3 625 aa17.61■□□□□ 0.41
SCARB2-213ENST00000638680 CNIH2Q6PI25 160 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms