RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 FAM25GB3EWG6 89 aa18.99■□□□□ 0.63
SYNGAP1-227ENST00000638142 SLC30A4O14863 429 aa18.99■□□□□ 0.63
SYNGAP1-227ENST00000638142 POLR1CO15160 346 aaPredicted RBP18.99■□□□□ 0.63
SYNGAP1-227ENST00000638142 C6P13671 934 aa18.99■□□□□ 0.63
SYNGAP1-227ENST00000638142 SDC2P34741 201 aa18.99■□□□□ 0.63
SYNGAP1-227ENST00000638142 CCR8P51685 355 aa18.99■□□□□ 0.63
SYNGAP1-227ENST00000638142 ST8SIA6P61647 398 aa18.99■□□□□ 0.63
SYNGAP1-227ENST00000638142 REEP5Q00765 189 aa18.99■□□□□ 0.63
SYNGAP1-227ENST00000638142 RPA4Q13156 261 aa18.99■□□□□ 0.63
SYNGAP1-227ENST00000638142 SNAPC1Q16533 368 aa18.99■□□□□ 0.63
SYNGAP1-227ENST00000638142 GRPEL2Q8TAA5 225 aa18.99■□□□□ 0.63
SYNGAP1-227ENST00000638142 XAGE5Q8WWM1 108 aa18.99■□□□□ 0.63
SYNGAP1-227ENST00000638142 PRRC1Q96M27 445 aa18.99■□□□□ 0.63
SYNGAP1-227ENST00000638142 ANKRA2Q9H9E1 313 aa18.99■□□□□ 0.63
SYNGAP1-227ENST00000638142 TAS2R7Q9NYW3 318 aa18.99■□□□□ 0.63
SYNGAP1-227ENST00000638142 NOTOA8MTQ0 251 aa18.99■□□□□ 0.63
SYNGAP1-227ENST00000638142 PRODHO43272 600 aa18.99■□□□□ 0.63
SYNGAP1-227ENST00000638142 TMPRSS11DO60235 418 aa18.99■□□□□ 0.63
SYNGAP1-227ENST00000638142 CXCL14O95715 111 aa18.99■□□□□ 0.63
SYNGAP1-227ENST00000638142 ALPPP05187 535 aa18.99■□□□□ 0.63
SYNGAP1-227ENST00000638142 METAP1P53582 386 aa18.99■□□□□ 0.63
SYNGAP1-227ENST00000638142 UBE3AQ05086 875 aa18.99■□□□□ 0.63
SYNGAP1-227ENST00000638142 QSOX2Q6ZRP7 698 aa18.99■□□□□ 0.63
SYNGAP1-227ENST00000638142 BBS10Q8TAM1 723 aa18.99■□□□□ 0.63
SYNGAP1-227ENST00000638142 RGMAQ96B86 450 aa18.99■□□□□ 0.63
SYNGAP1-227ENST00000638142 PITHD1Q9GZP4 211 aaPredicted RBP18.99■□□□□ 0.63
SYNGAP1-227ENST00000638142 NT5DC2Q9H857 520 aa18.99■□□□□ 0.63
SYNGAP1-227ENST00000638142 CUEDC1Q9NWM3 386 aaPredicted RBP18.99■□□□□ 0.63
SYNGAP1-227ENST00000638142 TEX10Q9NXF1 929 aaPredicted RBP18.99■□□□□ 0.63
SYNGAP1-227ENST00000638142 SF3B6Q9Y3B4 125 aaKnown RBP18.99■□□□□ 0.63
SYNGAP1-227ENST00000638142 LRRK1Q38SD2 2015 aa18.99■□□□□ 0.63
SYNGAP1-227ENST00000638142 B4DXG7 233 aa18.98■□□□□ 0.63
SYNGAP1-227ENST00000638142 HSD17B2P37059 387 aa18.98■□□□□ 0.63
SYNGAP1-227ENST00000638142 GPAT3Q53EU6 434 aa18.98■□□□□ 0.63
SYNGAP1-227ENST00000638142 YIF1BQ5BJH7 314 aa18.98■□□□□ 0.63
SYNGAP1-227ENST00000638142 SLC36A4Q6YBV0 504 aa18.98■□□□□ 0.63
SYNGAP1-227ENST00000638142 OR5D16Q8NGK9 328 aa18.98■□□□□ 0.63
SYNGAP1-227ENST00000638142 TMEM163Q8TC26 289 aa18.98■□□□□ 0.63
SYNGAP1-227ENST00000638142 TFGQ92734 400 aaPredicted RBP18.98■□□□□ 0.63
SYNGAP1-227ENST00000638142 UFD1Q92890 307 aa18.98■□□□□ 0.63
SYNGAP1-227ENST00000638142 C1GALT1C1Q96EU7 318 aa18.98■□□□□ 0.63
SYNGAP1-227ENST00000638142 KATNB1Q9BVA0 655 aa18.98■□□□□ 0.63
SYNGAP1-227ENST00000638142 PCBD2Q9H0N5 130 aa18.98■□□□□ 0.63
SYNGAP1-227ENST00000638142 BCL2L10Q9HD36 194 aa18.98■□□□□ 0.63
SYNGAP1-227ENST00000638142 CARD8Q9Y2G2 431 aa18.98■□□□□ 0.63
SYNGAP1-227ENST00000638142 GSTK1Q9Y2Q3 226 aa18.98■□□□□ 0.63
SYNGAP1-227ENST00000638142 NDUFS4O43181 175 aa18.98■□□□□ 0.63
SYNGAP1-227ENST00000638142 LZTS3O60299 673 aaPredicted RBP18.98■□□□□ 0.63
SYNGAP1-227ENST00000638142 MYL9P24844 172 aa18.98■□□□□ 0.63
SYNGAP1-227ENST00000638142 RPS25P62851 125 aaKnown RBP18.98■□□□□ 0.63
SYNGAP1-227ENST00000638142 PYDC2Q56P42 97 aa18.98■□□□□ 0.63
SYNGAP1-227ENST00000638142 ZNF628Q5EBL2 1059 aa18.98■□□□□ 0.63
SYNGAP1-227ENST00000638142 PPP2R2DQ66LE6 453 aa18.98■□□□□ 0.63
SYNGAP1-227ENST00000638142 ZNF730Q6ZMV8 503 aa18.98■□□□□ 0.63
SYNGAP1-227ENST00000638142 SZRD1Q7Z422 152 aa18.98■□□□□ 0.63
SYNGAP1-227ENST00000638142 ZNF438Q7Z4V0 828 aa18.98■□□□□ 0.63
SYNGAP1-227ENST00000638142 TM9SF4Q92544 642 aa18.98■□□□□ 0.63
SYNGAP1-227ENST00000638142 TRIM63Q969Q1 353 aa18.98■□□□□ 0.63
SYNGAP1-227ENST00000638142 RIPOR3Q96MK2 946 aa18.98■□□□□ 0.63
SYNGAP1-227ENST00000638142 FRMD6Q96NE9 622 aa18.98■□□□□ 0.63
SYNGAP1-227ENST00000638142 GPA33Q99795 319 aa18.98■□□□□ 0.63
SYNGAP1-227ENST00000638142 CFHR5Q9BXR6 569 aa18.98■□□□□ 0.63
SYNGAP1-227ENST00000638142 RNF121Q9H920 327 aa18.98■□□□□ 0.63
SYNGAP1-227ENST00000638142 PLSCR3Q9NRY6 295 aa18.98■□□□□ 0.63
SYNGAP1-227ENST00000638142 TRPC4Q9UBN4 977 aa18.98■□□□□ 0.63
SYNGAP1-227ENST00000638142 EXOSC1Q9Y3B2 195 aaKnown RBP18.98■□□□□ 0.63
SYNGAP1-227ENST00000638142 GABRA5P31644 462 aa18.97■□□□□ 0.63
SYNGAP1-227ENST00000638142 MLLT3P42568 568 aaPredicted RBP18.97■□□□□ 0.63
SYNGAP1-227ENST00000638142 KHKP50053 298 aa18.97■□□□□ 0.63
SYNGAP1-227ENST00000638142 TRA2BP62995 288 aaKnown RBP18.97■□□□□ 0.63
SYNGAP1-227ENST00000638142 TLE2Q04725 743 aa18.97■□□□□ 0.63
SYNGAP1-227ENST00000638142 OR2G6Q5TZ20 316 aa18.97■□□□□ 0.63
SYNGAP1-227ENST00000638142 OR6T1Q8NGN1 323 aa18.97■□□□□ 0.63
SYNGAP1-227ENST00000638142 WFIKKN2Q8TEU8 576 aa18.97■□□□□ 0.63
SYNGAP1-227ENST00000638142 RNFT2Q96EX2 444 aa18.97■□□□□ 0.63
SYNGAP1-227ENST00000638142 RPN2P04844 631 aa18.97■□□□□ 0.63
SYNGAP1-227ENST00000638142 FGF9P31371 208 aaPredicted RBP18.97■□□□□ 0.63
SYNGAP1-227ENST00000638142 GPC1P35052 558 aa18.97■□□□□ 0.63
SYNGAP1-227ENST00000638142 GNG2P59768 71 aa18.97■□□□□ 0.63
SYNGAP1-227ENST00000638142 MINDY4Q4G0A6 757 aa18.97■□□□□ 0.63
SYNGAP1-227ENST00000638142 CRTC2Q53ET0 693 aaPredicted RBP18.97■□□□□ 0.63
SYNGAP1-227ENST00000638142 MRGPREQ86SM8 312 aa18.97■□□□□ 0.63
SYNGAP1-227ENST00000638142 ARRDC3Q96B67 414 aa18.97■□□□□ 0.63
SYNGAP1-227ENST00000638142 GLIPR2Q9H4G4 154 aa18.97■□□□□ 0.63
SYNGAP1-227ENST00000638142 RERGLQ9H628 205 aa18.97■□□□□ 0.63
SYNGAP1-227ENST00000638142 DDX31Q9H8H2 851 aaKnown RBP18.97■□□□□ 0.63
SYNGAP1-227ENST00000638142 RANGRFQ9HD47 186 aaPredicted RBP18.97■□□□□ 0.63
SYNGAP1-227ENST00000638142 CREBZFQ9NS37 354 aa18.97■□□□□ 0.63
SYNGAP1-227ENST00000638142 ZCCHC3Q9NUD5 404 aaKnown RBP18.97■□□□□ 0.63
SYNGAP1-227ENST00000638142 YARS2Q9Y2Z4 477 aaKnown RBP18.97■□□□□ 0.63
SYNGAP1-227ENST00000638142 LTBP2Q14767 1821 aa18.97■□□□□ 0.63
SYNGAP1-227ENST00000638142 FEZF1A0PJY2 475 aa18.96■□□□□ 0.63
SYNGAP1-227ENST00000638142 CISD3P0C7P0 127 aa18.96■□□□□ 0.63
SYNGAP1-227ENST00000638142 ANXA11P50995 505 aaKnown RBP18.96■□□□□ 0.63
SYNGAP1-227ENST00000638142 PPP3R1P63098 170 aa18.96■□□□□ 0.63
SYNGAP1-227ENST00000638142 SNAP47Q5SQN1 464 aa18.96■□□□□ 0.63
SYNGAP1-227ENST00000638142 SLC27A4Q6P1M0 643 aa18.96■□□□□ 0.63
SYNGAP1-227ENST00000638142 AMZ2Q86W34 360 aa18.96■□□□□ 0.63
SYNGAP1-227ENST00000638142 OR5K2Q8NHB8 316 aa18.96■□□□□ 0.63
SYNGAP1-227ENST00000638142 TEX47Q8TBZ9 253 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms