RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 AADACL2Q6P093 401 aa18.54■□□□□ 0.56
CACNA1A-257ENST00000638009 FAM237AA0A1B0GTK4 181 aa18.54■□□□□ 0.56
CACNA1A-257ENST00000638009 SRPXP78539 464 aa18.54■□□□□ 0.56
CACNA1A-257ENST00000638009 ZNF704Q6ZNC4 412 aaPredicted RBP18.54■□□□□ 0.56
CACNA1A-257ENST00000638009 SNX27Q96L92 541 aa18.54■□□□□ 0.56
CACNA1A-257ENST00000638009 GPR88Q9GZN0 384 aa18.54■□□□□ 0.56
CACNA1A-257ENST00000638009 LAMA4Q16363 1823 aa18.54■□□□□ 0.56
CACNA1A-257ENST00000638009 PBX2P40425 430 aa18.54■□□□□ 0.56
CACNA1A-257ENST00000638009 F2RL1P55085 397 aa18.54■□□□□ 0.56
CACNA1A-257ENST00000638009 UBE2NP61088 152 aaKnown RBP18.54■□□□□ 0.56
CACNA1A-257ENST00000638009 GUK1Q16774 197 aa18.54■□□□□ 0.56
CACNA1A-257ENST00000638009 IL36AQ9UHA7 158 aa18.54■□□□□ 0.56
CACNA1A-257ENST00000638009 SCAMP1O15126 338 aa18.53■□□□□ 0.56
CACNA1A-257ENST00000638009 MED6O75586 246 aa18.53■□□□□ 0.56
CACNA1A-257ENST00000638009 PABPC4LP0CB38 370 aaKnown RBP18.53■□□□□ 0.56
CACNA1A-257ENST00000638009 UGT2B7P16662 529 aa18.53■□□□□ 0.56
CACNA1A-257ENST00000638009 HNRNPFP52597 415 aaKnown RBP18.53■□□□□ 0.56
CACNA1A-257ENST00000638009 IL13RA1P78552 427 aa18.53■□□□□ 0.56
CACNA1A-257ENST00000638009 BBS10Q8TAM1 723 aa18.53■□□□□ 0.56
CACNA1A-257ENST00000638009 SLC2A12Q8TD20 617 aa18.53■□□□□ 0.56
CACNA1A-257ENST00000638009 SLC16A10Q8TF71 515 aa18.53■□□□□ 0.56
CACNA1A-257ENST00000638009 UBL7Q96S82 380 aaPredicted RBP18.53■□□□□ 0.56
CACNA1A-257ENST00000638009 AKTIPQ9H8T0 292 aa18.53■□□□□ 0.56
CACNA1A-257ENST00000638009 EBF2Q9HAK2 575 aa18.53■□□□□ 0.56
CACNA1A-257ENST00000638009 ZFR2Q9UPR6 939 aaKnown RBP18.53■□□□□ 0.56
CACNA1A-257ENST00000638009 MITFO75030 526 aaPredicted RBP18.53■□□□□ 0.56
CACNA1A-257ENST00000638009 AOC2O75106 756 aa18.53■□□□□ 0.56
CACNA1A-257ENST00000638009 CHRNA1P02708 482 aa18.53■□□□□ 0.56
CACNA1A-257ENST00000638009 SMIM10L2AP0DMW4 78 aa18.53■□□□□ 0.56
CACNA1A-257ENST00000638009 SMIM10L2BP0DMW5 78 aa18.53■□□□□ 0.56
CACNA1A-257ENST00000638009 ZNF74Q16587 644 aa18.53■□□□□ 0.56
CACNA1A-257ENST00000638009 SULF2Q8IWU5 870 aa18.53■□□□□ 0.56
CACNA1A-257ENST00000638009 OR2T35Q8NGX2 323 aa18.53■□□□□ 0.56
CACNA1A-257ENST00000638009 ADAMTS19Q8TE59 1207 aa18.53■□□□□ 0.56
CACNA1A-257ENST00000638009 CCM2LQ9NUG4 571 aaPredicted RBP18.53■□□□□ 0.56
CACNA1A-257ENST00000638009 SPATA31A3Q5VYP0 1347 aa18.53■□□□□ 0.56
CACNA1A-257ENST00000638009 KNG1P01042 644 aa18.53■□□□□ 0.56
CACNA1A-257ENST00000638009 GAREM2Q75VX8 874 aa18.53■□□□□ 0.56
CACNA1A-257ENST00000638009 C15orf54Q8N8G6 183 aa18.53■□□□□ 0.56
CACNA1A-257ENST00000638009 LRRN4Q8WUT4 740 aa18.53■□□□□ 0.56
CACNA1A-257ENST00000638009 J3QRK9 145 aa18.53■□□□□ 0.56
CACNA1A-257ENST00000638009 DFFBO76075 338 aa18.53■□□□□ 0.56
CACNA1A-257ENST00000638009 HTRA4P83105 476 aaPredicted RBP18.53■□□□□ 0.56
CACNA1A-257ENST00000638009 RFPL4BQ6ZWI9 263 aa18.53■□□□□ 0.56
CACNA1A-257ENST00000638009 ZNF572Q7Z3I7 529 aaPredicted RBP18.53■□□□□ 0.56
CACNA1A-257ENST00000638009 FBXL8Q96CD0 374 aa18.53■□□□□ 0.56
CACNA1A-257ENST00000638009 PIP5K1AQ99755 562 aa18.53■□□□□ 0.56
CACNA1A-257ENST00000638009 AQP2P41181 271 aa18.53■□□□□ 0.56
CACNA1A-257ENST00000638009 TAF10Q12962 218 aa18.53■□□□□ 0.56
CACNA1A-257ENST00000638009 ESPNLQ6ZVH7 1005 aa18.53■□□□□ 0.56
CACNA1A-257ENST00000638009 KIAA0319LQ8IZA0 1049 aa18.53■□□□□ 0.56
CACNA1A-257ENST00000638009 FAM58AQ8N1B3 248 aa18.53■□□□□ 0.56
CACNA1A-257ENST00000638009 SIDT2Q8NBJ9 832 aaKnown RBP18.53■□□□□ 0.56
CACNA1A-257ENST00000638009 OR5L1Q8NGL2 311 aa18.53■□□□□ 0.56
CACNA1A-257ENST00000638009 TMPRSS5Q9H3S3 457 aa18.53■□□□□ 0.56
CACNA1A-257ENST00000638009 ZNF223Q9UK11 482 aaPredicted RBP18.53■□□□□ 0.56
CACNA1A-257ENST00000638009 CDHR4A6H8M9 788 aa18.53■□□□□ 0.56
CACNA1A-257ENST00000638009 NOXA1Q86UR1 476 aa18.53■□□□□ 0.56
CACNA1A-257ENST00000638009 PLD6Q8N2A8 252 aaKnown RBP18.53■□□□□ 0.56
CACNA1A-257ENST00000638009 HLA-DOBP13765 273 aa18.53■□□□□ 0.56
CACNA1A-257ENST00000638009 IMPA1P29218 277 aa18.53■□□□□ 0.56
CACNA1A-257ENST00000638009 GMPRP36959 345 aa18.53■□□□□ 0.56
CACNA1A-257ENST00000638009 RANP62826 216 aaKnown RBP18.53■□□□□ 0.56
CACNA1A-257ENST00000638009 SPHARQ15513 63 aa18.53■□□□□ 0.56
CACNA1A-257ENST00000638009 OR4K14Q8NGD5 310 aa18.53■□□□□ 0.56
CACNA1A-257ENST00000638009 OR51G2Q8NGK0 314 aa18.53■□□□□ 0.56
CACNA1A-257ENST00000638009 ARHGAP9Q9BRR9 750 aa18.53■□□□□ 0.56
CACNA1A-257ENST00000638009 SMIM35A0A1B0GVV1 85 aa18.52■□□□□ 0.56
CACNA1A-257ENST00000638009 A8MV72 311 aaPredicted RBP18.52■□□□□ 0.56
CACNA1A-257ENST00000638009 MAP2K4P45985 399 aa18.52■□□□□ 0.56
CACNA1A-257ENST00000638009 MAP4K2Q12851 820 aa18.52■□□□□ 0.56
CACNA1A-257ENST00000638009 ATP6AP1Q15904 470 aa18.52■□□□□ 0.56
CACNA1A-257ENST00000638009 NT5C3BQ969T7 300 aa18.52■□□□□ 0.56
CACNA1A-257ENST00000638009 RNF208Q9H0X6 261 aa18.52■□□□□ 0.56
CACNA1A-257ENST00000638009 SLC27A5Q9Y2P5 690 aa18.52■□□□□ 0.56
CACNA1A-257ENST00000638009 ZNF701M0R085 212 aaPredicted RBP18.52■□□□□ 0.56
CACNA1A-257ENST00000638009 ZNF30P17039 623 aa18.52■□□□□ 0.56
CACNA1A-257ENST00000638009 NFYAP23511 347 aaPredicted RBP18.52■□□□□ 0.56
CACNA1A-257ENST00000638009 GABARAPH6UMI1 98 aa18.52■□□□□ 0.56
CACNA1A-257ENST00000638009 SLC1A7O00341 560 aa18.52■□□□□ 0.56
CACNA1A-257ENST00000638009 IMPA2O14732 288 aa18.52■□□□□ 0.56
CACNA1A-257ENST00000638009 GABARAPO95166 117 aa18.52■□□□□ 0.56
CACNA1A-257ENST00000638009 EDNRBP24530 442 aa18.52■□□□□ 0.56
CACNA1A-257ENST00000638009 HK3P52790 923 aa18.52■□□□□ 0.56
CACNA1A-257ENST00000638009 AMZ1Q400G9 498 aa18.52■□□□□ 0.56
CACNA1A-257ENST00000638009 TEX26Q8N6G2 289 aa18.52■□□□□ 0.56
CACNA1A-257ENST00000638009 TMEM185AQ8NFB2 350 aa18.52■□□□□ 0.56
CACNA1A-257ENST00000638009 SMAP2Q8WU79 429 aaPredicted RBP18.52■□□□□ 0.56
CACNA1A-257ENST00000638009 ZNF587Q96SQ5 575 aaPredicted RBP18.52■□□□□ 0.56
CACNA1A-257ENST00000638009 DOHHQ9BU89 302 aa18.52■□□□□ 0.56
CACNA1A-257ENST00000638009 ACP6Q9NPH0 428 aa18.52■□□□□ 0.56
CACNA1A-257ENST00000638009 A0A1B0GV50 99 aa18.52■□□□□ 0.56
CACNA1A-257ENST00000638009 KLHL33A6NCF5 533 aa18.52■□□□□ 0.56
CACNA1A-257ENST00000638009 MMP20O60882 483 aa18.52■□□□□ 0.56
CACNA1A-257ENST00000638009 LYRM7Q5U5X0 104 aa18.52■□□□□ 0.56
CACNA1A-257ENST00000638009 LGALS12Q96DT0 336 aa18.52■□□□□ 0.56
CACNA1A-257ENST00000638009 PLEKHJ1Q9NW61 149 aa18.52■□□□□ 0.56
CACNA1A-257ENST00000638009 CNTN5O94779 1100 aa18.52■□□□□ 0.56
CACNA1A-257ENST00000638009 AKAIN1P0CW23 69 aa18.52■□□□□ 0.56
CACNA1A-257ENST00000638009 TACR2P21452 398 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms