RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 SPDL1Q96EA4 605 aa14.86□□□□□ -0.03
CLN6-216ENST00000636876 CCDC115Q96NT0 180 aa14.86□□□□□ -0.03
CLN6-216ENST00000636876 CXorf36Q9H7Y0 433 aa14.86□□□□□ -0.03
CLN6-216ENST00000636876 ANKRA2Q9H9E1 313 aa14.86□□□□□ -0.03
CLN6-216ENST00000636876 NEUROD4Q9HD90 331 aa14.86□□□□□ -0.03
CLN6-216ENST00000636876 DDX18Q9NVP1 670 aaKnown RBP14.86□□□□□ -0.03
CLN6-216ENST00000636876 GPR83Q9NYM4 423 aa14.86□□□□□ -0.03
CLN6-216ENST00000636876 TAS2R9Q9NYW1 312 aa14.86□□□□□ -0.03
CLN6-216ENST00000636876 NTMQ9P121 344 aa14.86□□□□□ -0.03
CLN6-216ENST00000636876 C19orf53Q9UNZ5 99 aaPredicted RBP14.86□□□□□ -0.03
CLN6-216ENST00000636876 CNTRLQ7Z7A1 2325 aa14.85□□□□□ -0.03
CLN6-216ENST00000636876 A8MUI8 341 aa14.85□□□□□ -0.03
CLN6-216ENST00000636876 UPK1AO00322 258 aa14.85□□□□□ -0.03
CLN6-216ENST00000636876 PRAMEF2O60811 474 aa14.85□□□□□ -0.03
CLN6-216ENST00000636876 CD1EP15812 388 aa14.85□□□□□ -0.03
CLN6-216ENST00000636876 CAPN3P20807 821 aa14.85□□□□□ -0.03
CLN6-216ENST00000636876 ADSLP30566 484 aaPredicted RBP14.85□□□□□ -0.03
CLN6-216ENST00000636876 SOX11P35716 441 aa14.85□□□□□ -0.03
CLN6-216ENST00000636876 POLE2P56282 527 aa14.85□□□□□ -0.03
CLN6-216ENST00000636876 HBA1P69905 142 aa14.85□□□□□ -0.03
CLN6-216ENST00000636876 RNF4P78317 190 aa14.85□□□□□ -0.03
CLN6-216ENST00000636876 RHDQ02161 417 aa14.85□□□□□ -0.03
CLN6-216ENST00000636876 LRRC74AQ0VAA2 488 aa14.85□□□□□ -0.03
CLN6-216ENST00000636876 KLF10Q13118 480 aa14.85□□□□□ -0.03
CLN6-216ENST00000636876 RAPSNQ13702 412 aa14.85□□□□□ -0.03
CLN6-216ENST00000636876 GK5Q6ZS86 529 aa14.85□□□□□ -0.03
CLN6-216ENST00000636876 SLC29A4Q7RTT9 530 aa14.85□□□□□ -0.03
CLN6-216ENST00000636876 MTDHQ86UE4 582 aaKnown RBP14.85□□□□□ -0.03
CLN6-216ENST00000636876 SLC5A8Q8N695 610 aa14.85□□□□□ -0.03
CLN6-216ENST00000636876 FDCSPQ8NFU4 85 aa14.85□□□□□ -0.03
CLN6-216ENST00000636876 OR4A15Q8NGL6 344 aa14.85□□□□□ -0.03
CLN6-216ENST00000636876 C16orf52Q8NHV5 167 aa14.85□□□□□ -0.03
CLN6-216ENST00000636876 TTC9Q92623 222 aa14.85□□□□□ -0.03
CLN6-216ENST00000636876 MAGED4Q96JG8 741 aa14.85□□□□□ -0.03
CLN6-216ENST00000636876 TRIM4Q9C037 500 aa14.85□□□□□ -0.03
CLN6-216ENST00000636876 C3orf14Q9HBI5 128 aa14.85□□□□□ -0.03
CLN6-216ENST00000636876 SLC52A3Q9NQ40 469 aa14.85□□□□□ -0.03
CLN6-216ENST00000636876 PCDHGB4Q9UN71 923 aa14.85□□□□□ -0.03
CLN6-216ENST00000636876 ERVK-11Q9UQG0 969 aa14.85□□□□□ -0.03
CLN6-216ENST00000636876 CAPN7Q9Y6W3 813 aa14.85□□□□□ -0.03
CLN6-216ENST00000636876 DYTNA2CJ06 578 aa14.84□□□□□ -0.03
CLN6-216ENST00000636876 CCDC154A6NI56 674 aa14.84□□□□□ -0.03
CLN6-216ENST00000636876 TMEM200CA6NKL6 621 aa14.84□□□□□ -0.03
CLN6-216ENST00000636876 MKRN2OSH3BPM6 223 aa14.84□□□□□ -0.03
CLN6-216ENST00000636876 SLC22A2O15244 555 aa14.84□□□□□ -0.03
CLN6-216ENST00000636876 EMC8O43402 210 aa14.84□□□□□ -0.03
CLN6-216ENST00000636876 COQ9O75208 318 aa14.84□□□□□ -0.03
CLN6-216ENST00000636876 PSMG1O95456 288 aa14.84□□□□□ -0.03
CLN6-216ENST00000636876 CPSF4O95639 269 aaKnown RBP14.84□□□□□ -0.03
CLN6-216ENST00000636876 ABCB1P08183 1280 aaPredicted RBP14.84□□□□□ -0.03
CLN6-216ENST00000636876 EMDP50402 254 aa14.84□□□□□ -0.03
CLN6-216ENST00000636876 EBPQ15125 230 aaKnown RBP14.84□□□□□ -0.03
CLN6-216ENST00000636876 MAPKAPK3Q16644 382 aa14.84□□□□□ -0.03
CLN6-216ENST00000636876 LINC00303Q3SY05 128 aa14.84□□□□□ -0.03
CLN6-216ENST00000636876 VPS26BQ4G0F5 336 aa14.84□□□□□ -0.03
CLN6-216ENST00000636876 CRB2Q5IJ48 1285 aa14.84□□□□□ -0.03
CLN6-216ENST00000636876 GKAP1Q5VSY0 366 aaPredicted RBP14.84□□□□□ -0.03
CLN6-216ENST00000636876 AGAP7PQ5VUJ5 663 aa14.84□□□□□ -0.03
CLN6-216ENST00000636876 B3GNTL1Q67FW5 361 aaPredicted RBP14.84□□□□□ -0.03
CLN6-216ENST00000636876 FCRLBQ6BAA4 426 aa14.84□□□□□ -0.03
CLN6-216ENST00000636876 TMEM64Q6YI46 380 aa14.84□□□□□ -0.03
CLN6-216ENST00000636876 RPS19BP1Q86WX3 136 aaKnown RBP14.84□□□□□ -0.03
CLN6-216ENST00000636876 LGI4Q8N135 537 aa14.84□□□□□ -0.03
CLN6-216ENST00000636876 ARMC10Q8N2F6 343 aa14.84□□□□□ -0.03
CLN6-216ENST00000636876 OR5L2Q8NGL0 311 aa14.84□□□□□ -0.03
CLN6-216ENST00000636876 GOT1L1Q8NHS2 421 aaPredicted RBP14.84□□□□□ -0.03
CLN6-216ENST00000636876 NUBPLQ8TB37 319 aa14.84□□□□□ -0.03
CLN6-216ENST00000636876 SFXN5Q8TD22 340 aa14.84□□□□□ -0.03
CLN6-216ENST00000636876 THAP3Q8WTV1 239 aaPredicted RBP14.84□□□□□ -0.03
CLN6-216ENST00000636876 TSPEARQ8WU66 669 aa14.84□□□□□ -0.03
CLN6-216ENST00000636876 FAM120BQ96EK7 910 aaKnown RBP14.84□□□□□ -0.03
CLN6-216ENST00000636876 ITCHQ96J02 903 aa14.84□□□□□ -0.03
CLN6-216ENST00000636876 AGAP4Q96P64 663 aa14.84□□□□□ -0.03
CLN6-216ENST00000636876 BBC3Q96PG8 261 aaPredicted RBP14.84□□□□□ -0.03
CLN6-216ENST00000636876 NPAS2Q99743 824 aa14.84□□□□□ -0.03
CLN6-216ENST00000636876 INPP5KQ9BT40 448 aa14.84□□□□□ -0.03
CLN6-216ENST00000636876 SLC25A23Q9BV35 468 aa14.84□□□□□ -0.03
CLN6-216ENST00000636876 WWTR1Q9GZV5 400 aa14.84□□□□□ -0.03
CLN6-216ENST00000636876 ZNF552Q9H707 407 aaPredicted RBP14.84□□□□□ -0.03
CLN6-216ENST00000636876 RMND5AQ9H871 391 aa14.84□□□□□ -0.03
CLN6-216ENST00000636876 SERHLQ9NQF3 203 aa14.84□□□□□ -0.03
CLN6-216ENST00000636876 ARMCX1Q9P291 453 aa14.84□□□□□ -0.03
CLN6-216ENST00000636876 PRODH2Q9UF12 536 aa14.84□□□□□ -0.03
CLN6-216ENST00000636876 CFL2Q9Y281 166 aa14.84□□□□□ -0.03
CLN6-216ENST00000636876 PCDHGA9Q9Y5G4 932 aaKnown RBP14.84□□□□□ -0.03
CLN6-216ENST00000636876 HEMK1Q9Y5R4 338 aaPredicted RBP14.84□□□□□ -0.03
CLN6-216ENST00000636876 SNX8Q9Y5X2 465 aa14.84□□□□□ -0.03
CLN6-216ENST00000636876 HELZ2Q9BYK8 2649 aaKnown RBP14.83□□□□□ -0.03
CLN6-216ENST00000636876 ASPDHA6ND91 283 aa14.83□□□□□ -0.04
CLN6-216ENST00000636876 SNRPB2P08579 225 aaKnown RBP14.83□□□□□ -0.04
CLN6-216ENST00000636876 SOAT1P35610 550 aa14.83□□□□□ -0.04
CLN6-216ENST00000636876 CCT3P49368 545 aaKnown RBP14.83□□□□□ -0.04
CLN6-216ENST00000636876 MLF1P58340 268 aa14.83□□□□□ -0.04
CLN6-216ENST00000636876 PRR5P85299 388 aa14.83□□□□□ -0.04
CLN6-216ENST00000636876 TLR1Q15399 786 aa14.83□□□□□ -0.04
CLN6-216ENST00000636876 SPDYE7PQ495Y7 208 aa14.83□□□□□ -0.04
CLN6-216ENST00000636876 ACER2Q5QJU3 275 aa14.83□□□□□ -0.04
CLN6-216ENST00000636876 TCTN3Q6NUS6 607 aa14.83□□□□□ -0.04
CLN6-216ENST00000636876 ISLR2Q6UXK2 745 aa14.83□□□□□ -0.04
CLN6-216ENST00000636876 ANKS4BQ8N8V4 417 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms