RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 POGLUT1Q8NBL1 392 aa11.76□□□□□ -0.53
CTSD-208ENST00000636843 HIPK4Q8NE63 616 aa11.76□□□□□ -0.53
CTSD-208ENST00000636843 PHF10Q8WUB8 498 aaKnown RBP11.76□□□□□ -0.53
CTSD-208ENST00000636843 TMEM125Q96AQ2 219 aa11.76□□□□□ -0.53
CTSD-208ENST00000636843 PYCR2Q96C36 320 aa11.76□□□□□ -0.53
CTSD-208ENST00000636843 SPDL1Q96EA4 605 aa11.76□□□□□ -0.53
CTSD-208ENST00000636843 PTCHD1Q96NR3 888 aa11.76□□□□□ -0.53
CTSD-208ENST00000636843 OR4K3Q96R72 315 aa11.76□□□□□ -0.53
CTSD-208ENST00000636843 GPATCH1Q9BRR8 931 aaKnown RBP11.76□□□□□ -0.53
CTSD-208ENST00000636843 CD300AQ9UGN4 299 aa11.76□□□□□ -0.53
CTSD-208ENST00000636843 LEF1Q9UJU2 399 aaPredicted RBP11.76□□□□□ -0.53
CTSD-208ENST00000636843 PACSIN3Q9UKS6 424 aa11.76□□□□□ -0.53
CTSD-208ENST00000636843 PDZD2O15018 2839 aa11.75□□□□□ -0.53
CTSD-208ENST00000636843 POLQO75417 2590 aa11.75□□□□□ -0.53
CTSD-208ENST00000636843 FAM234BA2RU67 622 aa11.75□□□□□ -0.53
CTSD-208ENST00000636843 SAGE2PA6NJ88 616 aa11.75□□□□□ -0.53
CTSD-208ENST00000636843 E9PLN8 166 aa11.75□□□□□ -0.53
CTSD-208ENST00000636843 H3BNX3 289 aa11.75□□□□□ -0.53
CTSD-208ENST00000636843 PRRG2O14669 202 aa11.75□□□□□ -0.53
CTSD-208ENST00000636843 LSM1O15116 133 aaKnown RBP11.75□□□□□ -0.53
CTSD-208ENST00000636843 B4GALT2O60909 372 aa11.75□□□□□ -0.53
CTSD-208ENST00000636843 EEDO75530 441 aaKnown RBP11.75□□□□□ -0.53
CTSD-208ENST00000636843 NPPAP01160 153 aa11.75□□□□□ -0.53
CTSD-208ENST00000636843 ZNF888P0CJ79 500 aaPredicted RBP11.75□□□□□ -0.53
CTSD-208ENST00000636843 ZNF24P17028 368 aa11.75□□□□□ -0.53
CTSD-208ENST00000636843 CAPN3P20807 821 aa11.75□□□□□ -0.53
CTSD-208ENST00000636843 TPP2P29144 1249 aaPredicted RBP11.75□□□□□ -0.53
CTSD-208ENST00000636843 TRHRP34981 398 aaPredicted RBP11.75□□□□□ -0.53
CTSD-208ENST00000636843 HTR6P50406 440 aa11.75□□□□□ -0.53
CTSD-208ENST00000636843 ERFP50548 548 aa11.75□□□□□ -0.53
CTSD-208ENST00000636843 HLCSP50747 726 aa11.75□□□□□ -0.53
CTSD-208ENST00000636843 NME5P56597 212 aa11.75□□□□□ -0.53
CTSD-208ENST00000636843 MS4A2Q01362 244 aa11.75□□□□□ -0.53
CTSD-208ENST00000636843 VPS26BQ4G0F5 336 aa11.75□□□□□ -0.53
CTSD-208ENST00000636843 GGTA1PQ4G0N0 100 aa11.75□□□□□ -0.53
CTSD-208ENST00000636843 ZNF468Q5VIY5 522 aaPredicted RBP11.75□□□□□ -0.53
CTSD-208ENST00000636843 SCIMPQ6UWF3 145 aa11.75□□□□□ -0.53
CTSD-208ENST00000636843 RETREG3Q86VR2 466 aa11.75□□□□□ -0.53
CTSD-208ENST00000636843 SNX31Q8N9S9 440 aa11.75□□□□□ -0.53
CTSD-208ENST00000636843 TRPV3Q8NET8 790 aa11.75□□□□□ -0.53
CTSD-208ENST00000636843 BHLHE22Q8NFJ8 381 aaPredicted RBP11.75□□□□□ -0.53
CTSD-208ENST00000636843 UTP15Q8TED0 518 aaKnown RBP11.75□□□□□ -0.53
CTSD-208ENST00000636843 SPOCK3Q9BQ16 436 aa11.75□□□□□ -0.53
CTSD-208ENST00000636843 VKORC1Q9BQB6 163 aa11.75□□□□□ -0.53
CTSD-208ENST00000636843 SLC52A3Q9NQ40 469 aa11.75□□□□□ -0.53
CTSD-208ENST00000636843 BATF3Q9NR55 127 aa11.75□□□□□ -0.53
CTSD-208ENST00000636843 ABCD2Q9UBJ2 740 aa11.75□□□□□ -0.53
CTSD-208ENST00000636843 LRCH1Q9Y2L9 728 aa11.75□□□□□ -0.53
CTSD-208ENST00000636843 AKAP9Q99996 3911 aa11.74□□□□□ -0.53
CTSD-208ENST00000636843 CCDC154A6NI56 674 aa11.74□□□□□ -0.53
CTSD-208ENST00000636843 PEX1O43933 1283 aa11.74□□□□□ -0.53
CTSD-208ENST00000636843 DNAJB6O75190 326 aa11.74□□□□□ -0.53
CTSD-208ENST00000636843 ULK1O75385 1050 aa11.74□□□□□ -0.53
CTSD-208ENST00000636843 CLDN9O95484 217 aa11.74□□□□□ -0.53
CTSD-208ENST00000636843 KRT6AP02538 564 aa11.74□□□□□ -0.53
CTSD-208ENST00000636843 KRT6BP04259 564 aa11.74□□□□□ -0.53
CTSD-208ENST00000636843 RNH1P13489 461 aaKnown RBP11.74□□□□□ -0.53
CTSD-208ENST00000636843 GDF5P43026 501 aa11.74□□□□□ -0.53
CTSD-208ENST00000636843 SLC6A12P48065 614 aa11.74□□□□□ -0.53
CTSD-208ENST00000636843 KRT6CP48668 564 aa11.74□□□□□ -0.53
CTSD-208ENST00000636843 POLR2JP52435 117 aaKnown RBP11.74□□□□□ -0.53
CTSD-208ENST00000636843 OLR1P78380 273 aa11.74□□□□□ -0.53
CTSD-208ENST00000636843 BTG2P78543 158 aa11.74□□□□□ -0.53
CTSD-208ENST00000636843 GTF3C1Q12789 2109 aa11.74□□□□□ -0.53
CTSD-208ENST00000636843 CATSPEREQ5SY80 951 aa11.74□□□□□ -0.53
CTSD-208ENST00000636843 TRIM46Q7Z4K8 759 aa11.74□□□□□ -0.53
CTSD-208ENST00000636843 DOLPP1Q86YN1 238 aa11.74□□□□□ -0.53
CTSD-208ENST00000636843 CHERPQ8IWX8 916 aaKnown RBP11.74□□□□□ -0.53
CTSD-208ENST00000636843 ARMC10Q8N2F6 343 aa11.74□□□□□ -0.53
CTSD-208ENST00000636843 PQLC1Q8N2U9 271 aa11.74□□□□□ -0.53
CTSD-208ENST00000636843 SLC5A11Q8WWX8 675 aa11.74□□□□□ -0.53
CTSD-208ENST00000636843 NEIL2Q969S2 332 aa11.74□□□□□ -0.53
CTSD-208ENST00000636843 C14orf79Q96F83 325 aa11.74□□□□□ -0.53
CTSD-208ENST00000636843 DMRTA2Q96SC8 542 aa11.74□□□□□ -0.53
CTSD-208ENST00000636843 ECSITQ9BQ95 431 aa11.74□□□□□ -0.53
CTSD-208ENST00000636843 AIF1LQ9BQI0 150 aa11.74□□□□□ -0.53
CTSD-208ENST00000636843 DEFB126Q9BYW3 111 aa11.74□□□□□ -0.53
CTSD-208ENST00000636843 KLHL4Q9C0H6 718 aa11.74□□□□□ -0.53
CTSD-208ENST00000636843 SLC6A16Q9GZN6 736 aa11.74□□□□□ -0.53
CTSD-208ENST00000636843 PELI2Q9HAT8 420 aa11.74□□□□□ -0.53
CTSD-208ENST00000636843 PRDM9Q9NQV7 894 aa11.74□□□□□ -0.53
CTSD-208ENST00000636843 KLF13Q9Y2Y9 288 aaPredicted RBP11.74□□□□□ -0.53
CTSD-208ENST00000636843 F8P00451 2351 aa11.74□□□□□ -0.53
CTSD-208ENST00000636843 CCDC168Q8NDH2 2452 aa11.73□□□□□ -0.53
CTSD-208ENST00000636843 IGKV3D-11A0A0A0MRZ8 115 aa11.73□□□□□ -0.53
CTSD-208ENST00000636843 C15orf38-AP3S2A0A0A6YYH1 394 aa11.73□□□□□ -0.53
CTSD-208ENST00000636843 TCRBV16S1A1N1A0A5B0 115 aa11.73□□□□□ -0.53
CTSD-208ENST00000636843 PRORSD1PA6NEY8 169 aa11.73□□□□□ -0.53
CTSD-208ENST00000636843 C19orf84I3L1E1 186 aa11.73□□□□□ -0.53
CTSD-208ENST00000636843 B3GALT4O96024 378 aa11.73□□□□□ -0.53
CTSD-208ENST00000636843 C8BP07358 591 aa11.73□□□□□ -0.53
CTSD-208ENST00000636843 SMIM10L1P0DMW3 83 aa11.73□□□□□ -0.53
CTSD-208ENST00000636843 HSD17B1P14061 328 aa11.73□□□□□ -0.53
CTSD-208ENST00000636843 KIR3DL1P43629 444 aa11.73□□□□□ -0.53
CTSD-208ENST00000636843 ZFP36L2P47974 494 aaKnown RBP11.73□□□□□ -0.53
CTSD-208ENST00000636843 SLC7A2P52569 658 aa11.73□□□□□ -0.53
CTSD-208ENST00000636843 RIPPLY3P57055 190 aa11.73□□□□□ -0.53
CTSD-208ENST00000636843 UFM1P61960 85 aa11.73□□□□□ -0.53
CTSD-208ENST00000636843 REEP5Q00765 189 aa11.73□□□□□ -0.53
CTSD-208ENST00000636843 BNIP2Q12982 314 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms