RNA–Protein interactions for RNA: ENST00000636314.1

CLN6-214, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 442 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-214ENST00000636314 TP53INP1Q96A56 240 aa16.92■□□□□ 0.3
CLN6-214ENST00000636314 EBPLQ9BY08 206 aa16.92■□□□□ 0.3
CLN6-214ENST00000636314 ZDHHC11Q9H8X9 412 aa16.92■□□□□ 0.3
CLN6-214ENST00000636314 SH2D2AQ9NP31 389 aa16.92■□□□□ 0.3
CLN6-214ENST00000636314 PLSCR2Q9NRY7 297 aa16.92■□□□□ 0.3
CLN6-214ENST00000636314 OXSMQ9NWU1 459 aa16.92■□□□□ 0.3
CLN6-214ENST00000636314 TUBA8Q9NY65 449 aaPredicted RBP16.92■□□□□ 0.3
CLN6-214ENST00000636314 MAT2BQ9NZL9 334 aa16.92■□□□□ 0.3
CLN6-214ENST00000636314 DLGAP4Q9Y2H0 992 aa16.92■□□□□ 0.3
CLN6-214ENST00000636314 NF1P21359 2839 aa16.92■□□□□ 0.3
CLN6-214ENST00000636314 SERTM1A2A2V5 107 aa16.91■□□□□ 0.3
CLN6-214ENST00000636314 CAPN14A8MX76 684 aa16.91■□□□□ 0.3
CLN6-214ENST00000636314 SLU7O95391 586 aaKnown RBP16.91■□□□□ 0.3
CLN6-214ENST00000636314 DRD2P14416 443 aa16.91■□□□□ 0.3
CLN6-214ENST00000636314 MAGEA5P43359 124 aa16.91■□□□□ 0.3
CLN6-214ENST00000636314 HEPACAMQ14CZ8 416 aa16.91■□□□□ 0.3
CLN6-214ENST00000636314 RPS6KA2Q15349 733 aa16.91■□□□□ 0.3
CLN6-214ENST00000636314 NTRK2Q16620 822 aa16.91■□□□□ 0.3
CLN6-214ENST00000636314 FAM180BQ6P0A1 224 aa16.91■□□□□ 0.3
CLN6-214ENST00000636314 EMBQ6PCB8 327 aa16.91■□□□□ 0.3
CLN6-214ENST00000636314 FAM111BQ6SJ93 734 aa16.91■□□□□ 0.3
CLN6-214ENST00000636314 C3P1Q6ZMU1 363 aa16.91■□□□□ 0.3
CLN6-214ENST00000636314 MEX3BQ6ZN04 569 aaKnown RBP16.91■□□□□ 0.3
CLN6-214ENST00000636314 TMEM251Q8N6I4 163 aa16.91■□□□□ 0.3
CLN6-214ENST00000636314 OR5M3Q8NGP4 307 aa16.91■□□□□ 0.3
CLN6-214ENST00000636314 CNRIP1Q96F85 164 aaPredicted RBP16.91■□□□□ 0.3
CLN6-214ENST00000636314 APOPT1Q96IL0 206 aa16.91■□□□□ 0.3
CLN6-214ENST00000636314 SPOCK3Q9BQ16 436 aa16.91■□□□□ 0.3
CLN6-214ENST00000636314 GIMAP4Q9NUV9 329 aa16.91■□□□□ 0.3
CLN6-214ENST00000636314 MKS1Q9NXB0 559 aa16.91■□□□□ 0.3
CLN6-214ENST00000636314 CNIH4Q9P003 139 aa16.91■□□□□ 0.3
CLN6-214ENST00000636314 HEY2Q9UBP5 337 aa16.91■□□□□ 0.3
CLN6-214ENST00000636314 BCAP29Q9UHQ4 241 aa16.91■□□□□ 0.3
CLN6-214ENST00000636314 BOKQ9UMX3 212 aaPredicted RBP16.91■□□□□ 0.3
CLN6-214ENST00000636314 CFL2Q9Y281 166 aa16.91■□□□□ 0.3
CLN6-214ENST00000636314 CHCHD2Q9Y6H1 151 aaPredicted RBP16.91■□□□□ 0.3
CLN6-214ENST00000636314 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.91■□□□□ 0.3
CLN6-214ENST00000636314 ZNF407Q9C0G0 2248 aa16.9■□□□□ 0.3
CLN6-214ENST00000636314 E9PLN8 166 aa16.9■□□□□ 0.3
CLN6-214ENST00000636314 TP53I11O14683 189 aa16.9■□□□□ 0.3
CLN6-214ENST00000636314 GPX3P22352 226 aa16.9■□□□□ 0.3
CLN6-214ENST00000636314 GSTM5P46439 218 aa16.9■□□□□ 0.3
CLN6-214ENST00000636314 DUSP2Q05923 314 aa16.9■□□□□ 0.3
CLN6-214ENST00000636314 ZNF763Q0D2J5 394 aa16.9■□□□□ 0.3
CLN6-214ENST00000636314 FOXO1Q12778 655 aa16.9■□□□□ 0.3
CLN6-214ENST00000636314 MAP4K2Q12851 820 aa16.9■□□□□ 0.3
CLN6-214ENST00000636314 EXOSC7Q15024 291 aaKnown RBP16.9■□□□□ 0.3
CLN6-214ENST00000636314 LTB4RQ15722 352 aa16.9■□□□□ 0.3
CLN6-214ENST00000636314 GALNT18Q6P9A2 607 aa16.9■□□□□ 0.3
CLN6-214ENST00000636314 TMEM64Q6YI46 380 aa16.9■□□□□ 0.3
CLN6-214ENST00000636314 SPNS3Q6ZMD2 512 aa16.9■□□□□ 0.3
CLN6-214ENST00000636314 SAMD14Q8IZD0 417 aaPredicted RBP16.9■□□□□ 0.3
CLN6-214ENST00000636314 C17orf47Q8NEP4 570 aa16.9■□□□□ 0.3
CLN6-214ENST00000636314 ADCY4Q8NFM4 1077 aa16.9■□□□□ 0.3
CLN6-214ENST00000636314 CDC26Q8NHZ8 85 aa16.9■□□□□ 0.3
CLN6-214ENST00000636314 AENQ8WTP8 325 aaKnown RBP16.9■□□□□ 0.3
CLN6-214ENST00000636314 C16orf78Q8WTQ4 265 aa16.9■□□□□ 0.3
CLN6-214ENST00000636314 PHF10Q8WUB8 498 aaKnown RBP16.9■□□□□ 0.3
CLN6-214ENST00000636314 ADIPOR1Q96A54 375 aa16.9■□□□□ 0.3
CLN6-214ENST00000636314 EXOSC8Q96B26 276 aaKnown RBP16.9■□□□□ 0.3
CLN6-214ENST00000636314 VKORC1Q9BQB6 163 aa16.9■□□□□ 0.3
CLN6-214ENST00000636314 SHCBP1LQ9BZQ2 653 aa16.9■□□□□ 0.3
CLN6-214ENST00000636314 MCCC2Q9HCC0 563 aa16.9■□□□□ 0.3
CLN6-214ENST00000636314 NPFFR2Q9Y5X5 522 aa16.9■□□□□ 0.3
CLN6-214ENST00000636314 DNAJC13O75165 2243 aa16.89■□□□□ 0.29
CLN6-214ENST00000636314 HCFC1P51610 2035 aa16.89■□□□□ 0.29
CLN6-214ENST00000636314 LRATO95237 230 aa16.89■□□□□ 0.29
CLN6-214ENST00000636314 ANXA4P09525 319 aaPredicted RBP16.89■□□□□ 0.29
CLN6-214ENST00000636314 S1PR1P21453 382 aa16.89■□□□□ 0.29
CLN6-214ENST00000636314 MGAT2Q10469 447 aa16.89■□□□□ 0.29
CLN6-214ENST00000636314 PCLAFQ15004 111 aa16.89■□□□□ 0.29
CLN6-214ENST00000636314 NNATQ16517 81 aa16.89■□□□□ 0.29
CLN6-214ENST00000636314 HYAL4Q2M3T9 481 aa16.89■□□□□ 0.29
CLN6-214ENST00000636314 TBCELQ5QJ74 424 aa16.89■□□□□ 0.29
CLN6-214ENST00000636314 WDR93Q6P2C0 686 aa16.89■□□□□ 0.29
CLN6-214ENST00000636314 TRABD2AQ86V40 505 aa16.89■□□□□ 0.29
CLN6-214ENST00000636314 C10orf107Q8IVU9 208 aa16.89■□□□□ 0.29
CLN6-214ENST00000636314 CA5BP1Q8WTZ4 195 aa16.89■□□□□ 0.29
CLN6-214ENST00000636314 DIO2Q92813 273 aa16.89■□□□□ 0.29
CLN6-214ENST00000636314 SDCCAG3Q96C92 435 aa16.89■□□□□ 0.29
CLN6-214ENST00000636314 C11orf24Q96F05 449 aaPredicted RBP16.89■□□□□ 0.29
CLN6-214ENST00000636314 ZNF681Q96N22 645 aa16.89■□□□□ 0.29
CLN6-214ENST00000636314 SMC6Q96SB8 1091 aa16.89■□□□□ 0.29
CLN6-214ENST00000636314 DOHHQ9BU89 302 aa16.89■□□□□ 0.29
CLN6-214ENST00000636314 ITPAQ9BY32 194 aa16.89■□□□□ 0.29
CLN6-214ENST00000636314 ZNF703Q9H7S9 590 aaPredicted RBP16.89■□□□□ 0.29
CLN6-214ENST00000636314 RRAGDQ9NQL2 400 aaPredicted RBP16.89■□□□□ 0.29
CLN6-214ENST00000636314 SIRT5Q9NXA8 310 aa16.89■□□□□ 0.29
CLN6-214ENST00000636314 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.89■□□□□ 0.29
CLN6-214ENST00000636314 LGALS13Q9UHV8 139 aa16.89■□□□□ 0.29
CLN6-214ENST00000636314 CNOT11Q9UKZ1 510 aaKnown RBP16.89■□□□□ 0.29
CLN6-214ENST00000636314 DTX4Q9Y2E6 619 aa16.89■□□□□ 0.29
CLN6-214ENST00000636314 PLLPQ9Y342 182 aa16.89■□□□□ 0.29
CLN6-214ENST00000636314 LIPGQ9Y5X9 500 aa16.89■□□□□ 0.29
CLN6-214ENST00000636314 V9GYY5 206 aaPredicted RBP16.89■□□□□ 0.29
CLN6-214ENST00000636314 ATP6AP2A0A1C7CYW4 349 aa16.88■□□□□ 0.29
CLN6-214ENST00000636314 NPIPA2E9PIF3 369 aa16.88■□□□□ 0.29
CLN6-214ENST00000636314 NPIPA3F8WFD2 350 aa16.88■□□□□ 0.29
CLN6-214ENST00000636314 ZNF500O60304 480 aaPredicted RBP16.88■□□□□ 0.29
CLN6-214ENST00000636314 ATP6AP2O75787 350 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms