RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 HSPA14Q0VDF9 509 aa4.55□□□□□ -1.68
LINC00550-201ENST00000629293 AGAP7PQ5VUJ5 663 aa4.55□□□□□ -1.68
LINC00550-201ENST00000629293 AFTPHQ6ULP2 937 aa4.55□□□□□ -1.68
LINC00550-201ENST00000629293 CLYBLQ8N0X4 340 aa4.55□□□□□ -1.68
LINC00550-201ENST00000629293 SIRT6Q8N6T7 355 aa4.55□□□□□ -1.68
LINC00550-201ENST00000629293 PTGR2Q8N8N7 351 aaPredicted RBP4.55□□□□□ -1.68
LINC00550-201ENST00000629293 OR9I1Q8NGQ6 314 aa4.55□□□□□ -1.68
LINC00550-201ENST00000629293 OR2Y1Q8NGV0 311 aa4.55□□□□□ -1.68
LINC00550-201ENST00000629293 OR4L1Q8NH43 312 aa4.55□□□□□ -1.68
LINC00550-201ENST00000629293 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.55□□□□□ -1.68
LINC00550-201ENST00000629293 ROPN1LQ96C74 230 aa4.55□□□□□ -1.68
LINC00550-201ENST00000629293 APIPQ96GX9 242 aa4.55□□□□□ -1.68
LINC00550-201ENST00000629293 CDKN2AIPNLQ96HQ2 116 aa4.55□□□□□ -1.68
LINC00550-201ENST00000629293 AGAP4Q96P64 663 aa4.55□□□□□ -1.68
LINC00550-201ENST00000629293 WDR77Q9BQA1 342 aaPredicted RBP4.55□□□□□ -1.68
LINC00550-201ENST00000629293 ACAT2Q9BWD1 397 aa4.55□□□□□ -1.68
LINC00550-201ENST00000629293 TUBB1Q9H4B7 451 aa4.55□□□□□ -1.68
LINC00550-201ENST00000629293 ZNF696Q9H7X3 374 aa4.55□□□□□ -1.68
LINC00550-201ENST00000629293 COPS7BQ9H9Q2 264 aaPredicted RBP4.55□□□□□ -1.68
LINC00550-201ENST00000629293 OLAHQ9NV23 265 aa4.55□□□□□ -1.68
LINC00550-201ENST00000629293 UBAP1Q9NZ09 502 aa4.55□□□□□ -1.68
LINC00550-201ENST00000629293 SEMA5BQ9P283 1151 aa4.55□□□□□ -1.68
LINC00550-201ENST00000629293 PTGFRNQ9P2B2 879 aa4.55□□□□□ -1.68
LINC00550-201ENST00000629293 CTSFQ9UBX1 484 aa4.55□□□□□ -1.68
LINC00550-201ENST00000629293 CRYL1Q9Y2S2 319 aa4.55□□□□□ -1.68
LINC00550-201ENST00000629293 FIS1Q9Y3D6 152 aa4.55□□□□□ -1.68
LINC00550-201ENST00000629293 ZNF106Q9H2Y7 1883 aaKnown RBP4.55□□□□□ -1.68
LINC00550-201ENST00000629293 GTF3C1Q12789 2109 aa4.55□□□□□ -1.68
LINC00550-201ENST00000629293 ATRQ13535 2644 aa4.55□□□□□ -1.68
LINC00550-201ENST00000629293 LRRC14BA6NHZ5 514 aa4.55□□□□□ -1.68
LINC00550-201ENST00000629293 FXYD1O00168 92 aa4.55□□□□□ -1.68
LINC00550-201ENST00000629293 CNOT3O75175 753 aaKnown RBP4.55□□□□□ -1.68
LINC00550-201ENST00000629293 SUPT7LO94864 414 aa4.55□□□□□ -1.68
LINC00550-201ENST00000629293 TSPAN12O95859 305 aa4.55□□□□□ -1.68
LINC00550-201ENST00000629293 AGR2O95994 175 aa4.55□□□□□ -1.68
LINC00550-201ENST00000629293 HBQ1P09105 142 aa4.55□□□□□ -1.68
LINC00550-201ENST00000629293 PEX19P40855 299 aa4.55□□□□□ -1.68
LINC00550-201ENST00000629293 CLCN7P51798 805 aa4.55□□□□□ -1.68
LINC00550-201ENST00000629293 CDKL1Q00532 357 aa4.55□□□□□ -1.68
LINC00550-201ENST00000629293 MALLQ13021 153 aa4.55□□□□□ -1.68
LINC00550-201ENST00000629293 APOFQ13790 326 aa4.55□□□□□ -1.68
LINC00550-201ENST00000629293 TAF1AQ15573 450 aaPredicted RBP4.55□□□□□ -1.68
LINC00550-201ENST00000629293 ZXDCQ2QGD7 858 aaPredicted RBP4.55□□□□□ -1.68
LINC00550-201ENST00000629293 COQ5Q5HYK3 327 aa4.55□□□□□ -1.68
LINC00550-201ENST00000629293 SAMD4BQ5PRF9 694 aaKnown RBP4.55□□□□□ -1.68
LINC00550-201ENST00000629293 IL23RQ5VWK5 629 aa4.55□□□□□ -1.68
LINC00550-201ENST00000629293 OGFOD2Q6N063 350 aa4.55□□□□□ -1.68
LINC00550-201ENST00000629293 ESPNLQ6ZVH7 1005 aa4.55□□□□□ -1.68
LINC00550-201ENST00000629293 PPP1R32Q7Z5V6 425 aa4.55□□□□□ -1.68
LINC00550-201ENST00000629293 CHERPQ8IWX8 916 aaKnown RBP4.55□□□□□ -1.68
LINC00550-201ENST00000629293 ADGRF3Q8IZF5 1079 aa4.55□□□□□ -1.68
LINC00550-201ENST00000629293 AMER2Q8N7J2 671 aa4.55□□□□□ -1.68
LINC00550-201ENST00000629293 TWIST2Q8WVJ9 160 aa4.55□□□□□ -1.68
LINC00550-201ENST00000629293 FAR1Q8WVX9 515 aa4.55□□□□□ -1.68
LINC00550-201ENST00000629293 LRFN5Q96NI6 719 aa4.55□□□□□ -1.68
LINC00550-201ENST00000629293 C17orf62Q9BQA9 187 aa4.55□□□□□ -1.68
LINC00550-201ENST00000629293 CCM2Q9BSQ5 444 aa4.55□□□□□ -1.68
LINC00550-201ENST00000629293 SOX7Q9BT81 388 aa4.55□□□□□ -1.68
LINC00550-201ENST00000629293 SDR39U1Q9NRG7 319 aaPredicted RBP4.55□□□□□ -1.68
LINC00550-201ENST00000629293 CCDC167Q9P0B6 97 aa4.55□□□□□ -1.68
LINC00550-201ENST00000629293 AP4B1Q9Y6B7 739 aa4.55□□□□□ -1.68
LINC00550-201ENST00000629293 SONP18583 2426 aaKnown RBP4.55□□□□□ -1.68
LINC00550-201ENST00000629293 DYTNA2CJ06 578 aa4.55□□□□□ -1.68
LINC00550-201ENST00000629293 KRT87PA6NCN2 255 aa4.55□□□□□ -1.68
LINC00550-201ENST00000629293 PPP6CO00743 305 aa4.55□□□□□ -1.68
LINC00550-201ENST00000629293 STX16O14662 325 aa4.55□□□□□ -1.68
LINC00550-201ENST00000629293 AZIN1O14977 448 aa4.55□□□□□ -1.68
LINC00550-201ENST00000629293 PIP5K1BO14986 540 aa4.55□□□□□ -1.68
LINC00550-201ENST00000629293 SIX3O95343 332 aaPredicted RBP4.55□□□□□ -1.68
LINC00550-201ENST00000629293 TSPAN8P19075 237 aa4.55□□□□□ -1.68
LINC00550-201ENST00000629293 CAPN3P20807 821 aa4.55□□□□□ -1.68
LINC00550-201ENST00000629293 ZFP36L2P47974 494 aaKnown RBP4.55□□□□□ -1.68
LINC00550-201ENST00000629293 FOXA1P55317 472 aa4.55□□□□□ -1.68
LINC00550-201ENST00000629293 MYBPC1Q00872 1141 aa4.55□□□□□ -1.68
LINC00550-201ENST00000629293 ROR2Q01974 943 aaKnown RBP4.55□□□□□ -1.68
LINC00550-201ENST00000629293 LCP2Q13094 533 aa4.55□□□□□ -1.68
LINC00550-201ENST00000629293 AIMP2Q13155 320 aaKnown RBP4.55□□□□□ -1.68
LINC00550-201ENST00000629293 CNPY1Q3B7I2 92 aa4.55□□□□□ -1.68
LINC00550-201ENST00000629293 VWA2Q5GFL6 755 aa4.55□□□□□ -1.68
LINC00550-201ENST00000629293 XKR7Q5GH72 579 aa4.55□□□□□ -1.68
LINC00550-201ENST00000629293 MZT2AQ6P582 158 aa4.55□□□□□ -1.68
LINC00550-201ENST00000629293 GFRALQ6UXV0 394 aa4.55□□□□□ -1.68
LINC00550-201ENST00000629293 PIANPQ8IYJ0 282 aa4.55□□□□□ -1.68
LINC00550-201ENST00000629293 ATP6V1E2Q96A05 226 aa4.55□□□□□ -1.68
LINC00550-201ENST00000629293 ZNF597Q96LX8 424 aa4.55□□□□□ -1.68
LINC00550-201ENST00000629293 BIRC8Q96P09 236 aa4.55□□□□□ -1.68
LINC00550-201ENST00000629293 IP6K3Q96PC2 410 aa4.55□□□□□ -1.68
LINC00550-201ENST00000629293 CENPKQ9BS16 269 aa4.55□□□□□ -1.68
LINC00550-201ENST00000629293 PCDHAC1Q9H158 963 aa4.55□□□□□ -1.68
LINC00550-201ENST00000629293 Q9H521 79 aa4.55□□□□□ -1.68
LINC00550-201ENST00000629293 ZNF160Q9HCG1 818 aa4.55□□□□□ -1.68
LINC00550-201ENST00000629293 PAPOLBQ9NRJ5 636 aaKnown RBP4.55□□□□□ -1.68
LINC00550-201ENST00000629293 ADA2Q9NZK5 511 aa4.55□□□□□ -1.68
LINC00550-201ENST00000629293 C5AR2Q9P296 337 aa4.55□□□□□ -1.68
LINC00550-201ENST00000629293 POLG2Q9UHN1 485 aa4.55□□□□□ -1.68
LINC00550-201ENST00000629293 MKL2Q9ULH7 1088 aa4.55□□□□□ -1.68
LINC00550-201ENST00000629293 PCDHGB4Q9UN71 923 aa4.55□□□□□ -1.68
LINC00550-201ENST00000629293 ICKQ9UPZ9 632 aa4.55□□□□□ -1.68
LINC00550-201ENST00000629293 PCDHGB5Q9Y5G0 923 aa4.55□□□□□ -1.68
LINC00550-201ENST00000629293 AP1M2Q9Y6Q5 423 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms