RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 C1orf109Q9NX04 203 aa20.59■□□□□ 0.89
SF1-220ENST00000626028 SLC17A7Q9P2U7 560 aa20.59■□□□□ 0.89
SF1-220ENST00000626028 BOKQ9UMX3 212 aaPredicted RBP20.59■□□□□ 0.89
SF1-220ENST00000626028 CENPEQ02224 2701 aa20.59■□□□□ 0.89
SF1-220ENST00000626028 MAST4O15021 2626 aa20.58■□□□□ 0.89
SF1-220ENST00000626028 CACNA1CQ13936 2221 aa20.58■□□□□ 0.89
SF1-220ENST00000626028 OR14I1A6ND48 311 aa20.58■□□□□ 0.89
SF1-220ENST00000626028 TYROBPO43914 113 aa20.58■□□□□ 0.89
SF1-220ENST00000626028 CLDN1O95832 211 aa20.58■□□□□ 0.89
SF1-220ENST00000626028 ESRRAP11474 423 aaPredicted RBP20.58■□□□□ 0.89
SF1-220ENST00000626028 PTGER1P34995 402 aa20.58■□□□□ 0.89
SF1-220ENST00000626028 PTGS2P35354 604 aa20.58■□□□□ 0.89
SF1-220ENST00000626028 ZNF844Q08AG5 666 aa20.58■□□□□ 0.89
SF1-220ENST00000626028 KIAA0040Q15053 153 aa20.58■□□□□ 0.89
SF1-220ENST00000626028 KRT71Q3SY84 523 aa20.58■□□□□ 0.89
SF1-220ENST00000626028 KANK2Q63ZY3 851 aa20.58■□□□□ 0.89
SF1-220ENST00000626028 NOXRED1Q6NXP6 359 aa20.58■□□□□ 0.89
SF1-220ENST00000626028 ZNF808Q8N4W9 903 aaPredicted RBP20.58■□□□□ 0.89
SF1-220ENST00000626028 FAM57AQ8TBR7 257 aa20.58■□□□□ 0.89
SF1-220ENST00000626028 DOK4Q8TEW6 326 aa20.58■□□□□ 0.89
SF1-220ENST00000626028 PHF10Q8WUB8 498 aaKnown RBP20.58■□□□□ 0.89
SF1-220ENST00000626028 ZNF764Q96H86 408 aaPredicted RBP20.58■□□□□ 0.89
SF1-220ENST00000626028 TNFRSF12AQ9NP84 129 aa20.58■□□□□ 0.89
SF1-220ENST00000626028 MIEF1Q9NQG6 463 aa20.58■□□□□ 0.89
SF1-220ENST00000626028 QPCTLQ9NXS2 382 aa20.58■□□□□ 0.89
SF1-220ENST00000626028 TMED5Q9Y3A6 229 aa20.58■□□□□ 0.89
SF1-220ENST00000626028 SEC23IPQ9Y6Y8 1000 aaKnown RBP20.58■□□□□ 0.89
SF1-220ENST00000626028 UNC79Q9P2D8 2635 aa20.57■□□□□ 0.88
SF1-220ENST00000626028 E9PLN8 166 aa20.57■□□□□ 0.88
SF1-220ENST00000626028 RGS16O15492 202 aaPredicted RBP20.57■□□□□ 0.88
SF1-220ENST00000626028 PLOD3O60568 738 aa20.57■□□□□ 0.88
SF1-220ENST00000626028 SNX4O95219 450 aa20.57■□□□□ 0.88
SF1-220ENST00000626028 IGHG3P01860 377 aa20.57■□□□□ 0.88
SF1-220ENST00000626028 IFI6P09912 130 aa20.57■□□□□ 0.88
SF1-220ENST00000626028 DRD5P21918 477 aa20.57■□□□□ 0.88
SF1-220ENST00000626028 RFC3P40938 356 aa20.57■□□□□ 0.88
SF1-220ENST00000626028 C3AR1Q16581 482 aa20.57■□□□□ 0.88
SF1-220ENST00000626028 ZNF628Q5EBL2 1059 aa20.57■□□□□ 0.88
SF1-220ENST00000626028 FAM219BQ5XKK7 198 aa20.57■□□□□ 0.88
SF1-220ENST00000626028 CLEC6AQ6EIG7 209 aa20.57■□□□□ 0.88
SF1-220ENST00000626028 FAM71E1Q6IPT2 247 aa20.57■□□□□ 0.88
SF1-220ENST00000626028 TMEM81Q6P7N7 255 aa20.57■□□□□ 0.88
SF1-220ENST00000626028 XKRXQ6PP77 449 aa20.57■□□□□ 0.88
SF1-220ENST00000626028 FAM111BQ6SJ93 734 aa20.57■□□□□ 0.88
SF1-220ENST00000626028 CCDC116Q8IYX3 515 aa20.57■□□□□ 0.88
SF1-220ENST00000626028 CLYBLQ8N0X4 340 aa20.57■□□□□ 0.88
SF1-220ENST00000626028 FAM13CQ8NE31 585 aa20.57■□□□□ 0.88
SF1-220ENST00000626028 OR10G3Q8NGC4 313 aa20.57■□□□□ 0.88
SF1-220ENST00000626028 OR52N2Q8NGI0 321 aa20.57■□□□□ 0.88
SF1-220ENST00000626028 EXOSC8Q96B26 276 aaKnown RBP20.57■□□□□ 0.88
SF1-220ENST00000626028 CCDC120Q96HB5 630 aa20.57■□□□□ 0.88
SF1-220ENST00000626028 LCORQ96JN0 433 aaPredicted RBP20.57■□□□□ 0.88
SF1-220ENST00000626028 CCT7Q99832 543 aa20.57■□□□□ 0.88
SF1-220ENST00000626028 VKORC1Q9BQB6 163 aa20.57■□□□□ 0.88
SF1-220ENST00000626028 EBPLQ9BY08 206 aa20.57■□□□□ 0.88
SF1-220ENST00000626028 PFDN4Q9NQP4 134 aa20.57■□□□□ 0.88
SF1-220ENST00000626028 BCAP29Q9UHQ4 241 aa20.57■□□□□ 0.88
SF1-220ENST00000626028 TINAGQ9UJW2 476 aa20.57■□□□□ 0.88
SF1-220ENST00000626028 MEMO1Q9Y316 297 aa20.57■□□□□ 0.88
SF1-220ENST00000626028 A0A0G2JMM0 328 aa20.56■□□□□ 0.88
SF1-220ENST00000626028 A0A1B0GTH9 108 aa20.56■□□□□ 0.88
SF1-220ENST00000626028 A0A1W2PPB8 328 aa20.56■□□□□ 0.88
SF1-220ENST00000626028 A0A1W2PRS3 328 aa20.56■□□□□ 0.88
SF1-220ENST00000626028 PINLYPA6NC86 204 aa20.56■□□□□ 0.88
SF1-220ENST00000626028 KIR3DP1A8MWS1 328 aa20.56■□□□□ 0.88
SF1-220ENST00000626028 TO15178 435 aa20.56■□□□□ 0.88
SF1-220ENST00000626028 SUSD5O60279 629 aa20.56■□□□□ 0.88
SF1-220ENST00000626028 SPAG7O75391 227 aa20.56■□□□□ 0.88
SF1-220ENST00000626028 SEC22BO75396 215 aa20.56■□□□□ 0.88
SF1-220ENST00000626028 CBX7O95931 251 aa20.56■□□□□ 0.88
SF1-220ENST00000626028 SOX18P35713 384 aa20.56■□□□□ 0.88
SF1-220ENST00000626028 PPICP45877 212 aa20.56■□□□□ 0.88
SF1-220ENST00000626028 EMDP50402 254 aa20.56■□□□□ 0.88
SF1-220ENST00000626028 KCNJ2P63252 427 aa20.56■□□□□ 0.88
SF1-220ENST00000626028 C2orf80Q0P641 193 aa20.56■□□□□ 0.88
SF1-220ENST00000626028 ART3Q13508 389 aa20.56■□□□□ 0.88
SF1-220ENST00000626028 ARL13AQ5H913 290 aaPredicted RBP20.56■□□□□ 0.88
SF1-220ENST00000626028 DOLPP1Q86YN1 238 aa20.56■□□□□ 0.88
SF1-220ENST00000626028 FAM9CQ8IZT9 166 aa20.56■□□□□ 0.88
SF1-220ENST00000626028 SLC34A3Q8N130 599 aa20.56■□□□□ 0.88
SF1-220ENST00000626028 ADCY4Q8NFM4 1077 aa20.56■□□□□ 0.88
SF1-220ENST00000626028 FCRL1Q96LA6 429 aa20.56■□□□□ 0.88
SF1-220ENST00000626028 LRTM1Q9HBL6 345 aa20.56■□□□□ 0.88
SF1-220ENST00000626028 ZFP64Q9NPA5 681 aa20.56■□□□□ 0.88
SF1-220ENST00000626028 CNOT11Q9UKZ1 510 aaKnown RBP20.56■□□□□ 0.88
SF1-220ENST00000626028 TRAF6Q9Y4K3 522 aa20.56■□□□□ 0.88
SF1-220ENST00000626028 DNAJC15Q9Y5T4 150 aa20.56■□□□□ 0.88
SF1-220ENST00000626028 KLF2Q9Y5W3 355 aaPredicted RBP20.56■□□□□ 0.88
SF1-220ENST00000626028 ARHGAP21Q5T5U3 1957 aa20.55■□□□□ 0.88
SF1-220ENST00000626028 A0A1B0GVC2 190 aa20.55■□□□□ 0.88
SF1-220ENST00000626028 A1L4Q6 167 aa20.55■□□□□ 0.88
SF1-220ENST00000626028 MYO1GB0I1T2 1018 aa20.55■□□□□ 0.88
SF1-220ENST00000626028 CDC40O60508 579 aaKnown RBP eCLIP20.55■□□□□ 0.88
SF1-220ENST00000626028 SNUPNO95149 360 aaKnown RBP20.55■□□□□ 0.88
SF1-220ENST00000626028 BPGMP07738 259 aa20.55■□□□□ 0.88
SF1-220ENST00000626028 ABCD3P28288 659 aa20.55■□□□□ 0.88
SF1-220ENST00000626028 ETV4P43268 484 aa20.55■□□□□ 0.88
SF1-220ENST00000626028 DNASE1L1P49184 302 aa20.55■□□□□ 0.88
SF1-220ENST00000626028 SMSP52788 366 aa20.55■□□□□ 0.88
SF1-220ENST00000626028 DUSP2Q05923 314 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms