RNA–Protein interactions for RNA: ENST00000625286.1

DDX41-218, Transcript of DEAD-box helicase 41, humanhuman

TSL 5 BASIC

Gene DDX41, Length 150 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-218ENST00000625286 NKX6-1P78426 367 aaPredicted RBP10.05□□□□□ -0.8
DDX41-218ENST00000625286 CUL3Q13618 768 aa10.05□□□□□ -0.8
DDX41-218ENST00000625286 SETDB1Q15047 1291 aa10.05□□□□□ -0.8
DDX41-218ENST00000625286 NNATQ16517 81 aa10.05□□□□□ -0.8
DDX41-218ENST00000625286 CPSF6Q16630 551 aaKnown RBP eCLIP10.05□□□□□ -0.8
DDX41-218ENST00000625286 GRTP1Q5TC63 336 aa10.05□□□□□ -0.8
DDX41-218ENST00000625286 LIPJQ5W064 366 aa10.05□□□□□ -0.8
DDX41-218ENST00000625286 FAM111BQ6SJ93 734 aa10.05□□□□□ -0.8
DDX41-218ENST00000625286 CLEC9AQ6UXN8 241 aa10.05□□□□□ -0.8
DDX41-218ENST00000625286 LUZP2Q86TE4 346 aa10.05□□□□□ -0.8
DDX41-218ENST00000625286 PACS2Q86VP3 889 aa10.05□□□□□ -0.8
DDX41-218ENST00000625286 KIF18BQ86Y91 864 aa10.05□□□□□ -0.8
DDX41-218ENST00000625286 MYLK4Q86YV6 388 aaPredicted RBP10.05□□□□□ -0.8
DDX41-218ENST00000625286 L3MBTL4Q8NA19 623 aa10.05□□□□□ -0.8
DDX41-218ENST00000625286 ZPLD1Q8TCW7 415 aa10.05□□□□□ -0.8
DDX41-218ENST00000625286 CTHRC1Q96CG8 243 aa10.05□□□□□ -0.8
DDX41-218ENST00000625286 CDK15Q96Q40 435 aa10.05□□□□□ -0.8
DDX41-218ENST00000625286 PELOQ9BRX2 385 aaKnown RBP10.05□□□□□ -0.8
DDX41-218ENST00000625286 RBM24Q9BX46 236 aaKnown RBP10.05□□□□□ -0.8
DDX41-218ENST00000625286 DPH5Q9H2P9 285 aa10.05□□□□□ -0.8
DDX41-218ENST00000625286 NMRAL1Q9HBL8 299 aa10.05□□□□□ -0.8
DDX41-218ENST00000625286 SNX15Q9NRS6 342 aa10.05□□□□□ -0.8
DDX41-218ENST00000625286 LYARQ9NX58 379 aaKnown RBP10.05□□□□□ -0.8
DDX41-218ENST00000625286 CES1P1Q9UKY3 287 aa10.05□□□□□ -0.8
DDX41-218ENST00000625286 EDARQ9UNE0 448 aa10.05□□□□□ -0.8
DDX41-218ENST00000625286 WIF1Q9Y5W5 379 aa10.05□□□□□ -0.8
DDX41-218ENST00000625286 ATRQ13535 2644 aa10.04□□□□□ -0.8
DDX41-218ENST00000625286 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.04□□□□□ -0.8
DDX41-218ENST00000625286 C17orf51A8MQB3 221 aa10.04□□□□□ -0.8
DDX41-218ENST00000625286 FOXE1O00358 373 aaPredicted RBP10.04□□□□□ -0.8
DDX41-218ENST00000625286 OR7A17O14581 309 aa10.04□□□□□ -0.8
DDX41-218ENST00000625286 NME6O75414 186 aaPredicted RBP10.04□□□□□ -0.8
DDX41-218ENST00000625286 TNFSF13O75888 250 aa10.04□□□□□ -0.8
DDX41-218ENST00000625286 RCBTB2O95199 551 aa10.04□□□□□ -0.8
DDX41-218ENST00000625286 LTA4HP09960 611 aaKnown RBP10.04□□□□□ -0.8
DDX41-218ENST00000625286 CTAGE8P0CG41 777 aa10.04□□□□□ -0.8
DDX41-218ENST00000625286 SPRP35270 261 aaPredicted RBP10.04□□□□□ -0.8
DDX41-218ENST00000625286 MASP1P48740 699 aa10.04□□□□□ -0.8
DDX41-218ENST00000625286 GFRA1P56159 465 aa10.04□□□□□ -0.8
DDX41-218ENST00000625286 SRYQ05066 204 aa10.04□□□□□ -0.8
DDX41-218ENST00000625286 EXOSC7Q15024 291 aaKnown RBP10.04□□□□□ -0.8
DDX41-218ENST00000625286 PCBP2Q15366 365 aaKnown RBP eCLIP10.04□□□□□ -0.8
DDX41-218ENST00000625286 TOMM20Q15388 145 aa10.04□□□□□ -0.8
DDX41-218ENST00000625286 PFKFB4Q16877 469 aa10.04□□□□□ -0.8
DDX41-218ENST00000625286 FBXW10Q5XX13 1052 aa10.04□□□□□ -0.8
DDX41-218ENST00000625286 FAM180BQ6P0A1 224 aa10.04□□□□□ -0.8
DDX41-218ENST00000625286 CYP20A1Q6UW02 462 aa10.04□□□□□ -0.8
DDX41-218ENST00000625286 ANGPTL8Q6UXH0 198 aa10.04□□□□□ -0.8
DDX41-218ENST00000625286 C22orf34Q6ZV56 151 aa10.04□□□□□ -0.8
DDX41-218ENST00000625286 GOLGA7Q7Z5G4 137 aa10.04□□□□□ -0.8
DDX41-218ENST00000625286 CTAGE4Q8IX94 777 aa10.04□□□□□ -0.8
DDX41-218ENST00000625286 CTAGE3PQ8IX95 158 aa10.04□□□□□ -0.8
DDX41-218ENST00000625286 GALNT12Q8IXK2 581 aa10.04□□□□□ -0.8
DDX41-218ENST00000625286 GCNT2Q8N0V5 402 aa10.04□□□□□ -0.8
DDX41-218ENST00000625286 PPM1NQ8N819 430 aa10.04□□□□□ -0.8
DDX41-218ENST00000625286 OR1J4Q8NGS1 313 aa10.04□□□□□ -0.8
DDX41-218ENST00000625286 INTS12Q96CB8 462 aaKnown RBP10.04□□□□□ -0.8
DDX41-218ENST00000625286 LRRC46Q96FV0 321 aa10.04□□□□□ -0.8
DDX41-218ENST00000625286 DACH2Q96NX9 599 aa10.04□□□□□ -0.8
DDX41-218ENST00000625286 UCN2Q96RP3 112 aa10.04□□□□□ -0.8
DDX41-218ENST00000625286 YIPF4Q9BSR8 244 aa10.04□□□□□ -0.8
DDX41-218ENST00000625286 ITPAQ9BY32 194 aa10.04□□□□□ -0.8
DDX41-218ENST00000625286 IPPKQ9H8X2 491 aa10.04□□□□□ -0.8
DDX41-218ENST00000625286 ACTR8Q9H981 624 aa10.04□□□□□ -0.8
DDX41-218ENST00000625286 NEUROD4Q9HD90 331 aa10.04□□□□□ -0.8
DDX41-218ENST00000625286 PRM3Q9NNZ6 103 aa10.04□□□□□ -0.8
DDX41-218ENST00000625286 SERHLQ9NQF3 203 aa10.04□□□□□ -0.8
DDX41-218ENST00000625286 BEX4Q9NWD9 120 aaPredicted RBP10.04□□□□□ -0.8
DDX41-218ENST00000625286 PSD3Q9NYI0 1048 aa10.04□□□□□ -0.8
DDX41-218ENST00000625286 EHD3Q9NZN3 535 aa10.04□□□□□ -0.8
DDX41-218ENST00000625286 CLCF1Q9UBD9 225 aa10.04□□□□□ -0.8
DDX41-218ENST00000625286 ZNF639Q9UID6 485 aa10.04□□□□□ -0.8
DDX41-218ENST00000625286 PCDHGA11Q9Y5H2 935 aa10.04□□□□□ -0.8
DDX41-218ENST00000625286 DSCAMO60469 2012 aa10.04□□□□□ -0.8
DDX41-218ENST00000625286 USF3Q68DE3 2245 aa10.03□□□□□ -0.8
DDX41-218ENST00000625286 CUBNO60494 3623 aa10.03□□□□□ -0.8
DDX41-218ENST00000625286 SH3D21A4FU49 640 aa10.03□□□□□ -0.8
DDX41-218ENST00000625286 CAPN14A8MX76 684 aa10.03□□□□□ -0.8
DDX41-218ENST00000625286 A8MXE2 369 aa10.03□□□□□ -0.8
DDX41-218ENST00000625286 SNPHO15079 494 aa10.03□□□□□ -0.8
DDX41-218ENST00000625286 UGT2B11O75310 529 aa10.03□□□□□ -0.8
DDX41-218ENST00000625286 PPM1BO75688 479 aa10.03□□□□□ -0.8
DDX41-218ENST00000625286 CBX7O95931 251 aa10.03□□□□□ -0.8
DDX41-218ENST00000625286 TGM6O95932 706 aa10.03□□□□□ -0.8
DDX41-218ENST00000625286 ACTL6AO96019 429 aa10.03□□□□□ -0.8
DDX41-218ENST00000625286 C2P06681 752 aa10.03□□□□□ -0.8
DDX41-218ENST00000625286 HEXAP06865 529 aa10.03□□□□□ -0.8
DDX41-218ENST00000625286 KLK1P06870 262 aa10.03□□□□□ -0.8
DDX41-218ENST00000625286 CPMP14384 443 aa10.03□□□□□ -0.8
DDX41-218ENST00000625286 CNTFP26441 200 aa10.03□□□□□ -0.8
DDX41-218ENST00000625286 CRABP2P29373 138 aa10.03□□□□□ -0.8
DDX41-218ENST00000625286 ADSLP30566 484 aaPredicted RBP10.03□□□□□ -0.8
DDX41-218ENST00000625286 GUCY2DQ02846 1103 aa10.03□□□□□ -0.8
DDX41-218ENST00000625286 FAM27E3Q08E93 113 aa10.03□□□□□ -0.8
DDX41-218ENST00000625286 ILF2Q12905 390 aaKnown RBP10.03□□□□□ -0.8
DDX41-218ENST00000625286 GTF2H2Q13888 395 aa10.03□□□□□ -0.8
DDX41-218ENST00000625286 SLMAPQ14BN4 828 aa10.03□□□□□ -0.8
DDX41-218ENST00000625286 PRICKLE4Q2TBC4 344 aa10.03□□□□□ -0.8
DDX41-218ENST00000625286 TRMT12Q53H54 448 aaKnown RBP10.03□□□□□ -0.8
DDX41-218ENST00000625286 UBAP2Q5T6F2 1119 aaKnown RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms