RNA–Protein interactions for RNA: ENST00000623461.3

VCL-206, Transcript of vinculin, humanhuman

TSL 1 (best)

Gene VCL, Length 7,995 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-206ENST00000623461 ACVR1BP36896 505 aa8.51□□□□□ -1.05
VCL-206ENST00000623461 GCGRP47871 477 aa8.51□□□□□ -1.05
VCL-206ENST00000623461 ADARB1P78563 741 aaKnown RBP8.51□□□□□ -1.05
VCL-206ENST00000623461 RNASE10Q5GAN6 216 aaKnown RBP8.51□□□□□ -1.05
VCL-206ENST00000623461 ABHD13Q7L211 337 aa8.51□□□□□ -1.05
VCL-206ENST00000623461 CCDC54Q8NEL0 328 aa8.51□□□□□ -1.05
VCL-206ENST00000623461 OTUB2Q96DC9 234 aa8.51□□□□□ -1.05
VCL-206ENST00000623461 C12orf42Q96LP6 360 aa8.51□□□□□ -1.05
VCL-206ENST00000623461 PSORS1C1Q9UIG5 152 aa8.51□□□□□ -1.05
VCL-206ENST00000623461 MAST2Q6P0Q8 1798 aa8.5□□□□□ -1.05
VCL-206ENST00000623461 OR6C65A6NJZ3 312 aa8.5□□□□□ -1.05
VCL-206ENST00000623461 SLC38A8A6NNN8 435 aa8.5□□□□□ -1.05
VCL-206ENST00000623461 ARPC1BO15143 372 aaKnown RBP8.5□□□□□ -1.05
VCL-206ENST00000623461 FABP7O15540 132 aa8.5□□□□□ -1.05
VCL-206ENST00000623461 AKAIN1P0CW23 69 aa8.5□□□□□ -1.05
VCL-206ENST00000623461 CXCR1P25024 350 aa8.5□□□□□ -1.05
VCL-206ENST00000623461 IL12BP29460 328 aa8.5□□□□□ -1.05
VCL-206ENST00000623461 SSTR4P31391 388 aa8.5□□□□□ -1.05
VCL-206ENST00000623461 LUMP51884 338 aaPredicted RBP8.5□□□□□ -1.05
VCL-206ENST00000623461 BAK1Q16611 211 aa8.5□□□□□ -1.05
VCL-206ENST00000623461 CYP27C1Q4G0S4 372 aa8.5□□□□□ -1.05
VCL-206ENST00000623461 CARD16Q5EG05 197 aa8.5□□□□□ -1.05
VCL-206ENST00000623461 FAM182AQ5T1J6 154 aa8.5□□□□□ -1.05
VCL-206ENST00000623461 CEP68Q76N32 757 aa8.5□□□□□ -1.05
VCL-206ENST00000623461 DNAJC22Q8N4W6 341 aa8.5□□□□□ -1.05
VCL-206ENST00000623461 FAM86B1Q8N7N1 296 aa8.5□□□□□ -1.05
VCL-206ENST00000623461 ADAMTS14Q8WXS8 1223 aa8.5□□□□□ -1.05
VCL-206ENST00000623461 ZNF300Q96RE9 604 aaPredicted RBP8.5□□□□□ -1.05
VCL-206ENST00000623461 CNN2Q99439 309 aaKnown RBP8.5□□□□□ -1.05
VCL-206ENST00000623461 DPH2Q9BQC3 489 aaPredicted RBP8.5□□□□□ -1.05
VCL-206ENST00000623461 STRA6Q9BX79 667 aa8.5□□□□□ -1.05
VCL-206ENST00000623461 KATNBL1Q9H079 304 aa8.5□□□□□ -1.05
VCL-206ENST00000623461 CA5BQ9Y2D0 317 aa8.5□□□□□ -1.05
VCL-206ENST00000623461 PCDHAC2Q9Y5I4 1007 aa8.5□□□□□ -1.05
VCL-206ENST00000623461 NEDD8-MDP1E9PL57 170 aa8.5□□□□□ -1.05
VCL-206ENST00000623461 NAT1P18440 290 aa8.5□□□□□ -1.05
VCL-206ENST00000623461 ADH7P40394 386 aa8.5□□□□□ -1.05
VCL-206ENST00000623461 ERVPABLB-1P60509 514 aa8.5□□□□□ -1.05
VCL-206ENST00000623461 HERV-K104P61576 105 aa8.5□□□□□ -1.05
VCL-206ENST00000623461 PARGQ86W56 976 aa8.5□□□□□ -1.05
VCL-206ENST00000623461 TEX26Q8N6G2 289 aa8.5□□□□□ -1.05
VCL-206ENST00000623461 SCAMP5Q8TAC9 235 aa8.5□□□□□ -1.05
VCL-206ENST00000623461 BRIX1Q8TDN6 353 aaKnown RBP8.5□□□□□ -1.05
VCL-206ENST00000623461 ELP5Q8TE02 316 aa8.5□□□□□ -1.05
VCL-206ENST00000623461 FUBP1Q96AE4 644 aaKnown RBP8.5□□□□□ -1.05
VCL-206ENST00000623461 RADILQ96JH8 1075 aa8.5□□□□□ -1.05
VCL-206ENST00000623461 VRK1Q99986 396 aaPredicted RBP8.5□□□□□ -1.05
VCL-206ENST00000623461 TRMT61BQ9BVS5 477 aaKnown RBP8.5□□□□□ -1.05
VCL-206ENST00000623461 ADAP2Q9NPF8 381 aa8.5□□□□□ -1.05
VCL-206ENST00000623461 WDR45Q9Y484 360 aa8.5□□□□□ -1.05
VCL-206ENST00000623461 PRKCGP05129 697 aa8.5□□□□□ -1.05
VCL-206ENST00000623461 ERCC1P07992 297 aaPredicted RBP8.5□□□□□ -1.05
VCL-206ENST00000623461 GIFP27352 417 aa8.5□□□□□ -1.05
VCL-206ENST00000623461 ETV3P41162 512 aa8.5□□□□□ -1.05
VCL-206ENST00000623461 SOX9P48436 509 aa8.5□□□□□ -1.05
VCL-206ENST00000623461 RGNQ15493 299 aa8.5□□□□□ -1.05
VCL-206ENST00000623461 RAB11BQ15907 218 aa8.5□□□□□ -1.05
VCL-206ENST00000623461 CES4AQ5XG92 561 aa8.5□□□□□ -1.05
VCL-206ENST00000623461 SLC8B1Q6J4K2 584 aa8.5□□□□□ -1.05
VCL-206ENST00000623461 AMZ2Q86W34 360 aa8.5□□□□□ -1.05
VCL-206ENST00000623461 PTRH1Q86Y79 214 aaKnown RBP8.5□□□□□ -1.05
VCL-206ENST00000623461 CCDC71Q8IV32 467 aaPredicted RBP8.5□□□□□ -1.05
VCL-206ENST00000623461 GIMAP1Q8WWP7 306 aa8.5□□□□□ -1.05
VCL-206ENST00000623461 DUS3LQ96G46 650 aaKnown RBP8.5□□□□□ -1.05
VCL-206ENST00000623461 RDH14Q9HBH5 336 aa8.5□□□□□ -1.05
VCL-206ENST00000623461 KCNJ16Q9NPI9 418 aa8.5□□□□□ -1.05
VCL-206ENST00000623461 EEF1E1-BLOC1S5C9J1V9 151 aa8.5□□□□□ -1.05
VCL-206ENST00000623461 KCNE1P15382 129 aa8.5□□□□□ -1.05
VCL-206ENST00000623461 UNC5DQ6UXZ4 953 aa8.5□□□□□ -1.05
VCL-206ENST00000623461 TPRG1Q6ZUI0 275 aa8.5□□□□□ -1.05
VCL-206ENST00000623461 TMEM173Q86WV6 379 aaPredicted RBP8.5□□□□□ -1.05
VCL-206ENST00000623461 DNAJC5GQ8N7S2 189 aa8.5□□□□□ -1.05
VCL-206ENST00000623461 GPR150Q8NGU9 434 aa8.5□□□□□ -1.05
VCL-206ENST00000623461 ARNTL2Q8WYA1 636 aa8.5□□□□□ -1.05
VCL-206ENST00000623461 DCUN1D4Q92564 292 aa8.5□□□□□ -1.05
VCL-206ENST00000623461 FIZ1Q96SL8 496 aa8.5□□□□□ -1.05
VCL-206ENST00000623461 SLC6A7Q99884 636 aa8.5□□□□□ -1.05
VCL-206ENST00000623461 TREX2Q9BQ50 279 aaPredicted RBP8.5□□□□□ -1.05
VCL-206ENST00000623461 THSD1Q9NS62 852 aa8.5□□□□□ -1.05
VCL-206ENST00000623461 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.5□□□□□ -1.05
VCL-206ENST00000623461 CSTBP04080 98 aaKnown RBP8.5□□□□□ -1.05
VCL-206ENST00000623461 ACVRL1P37023 503 aa8.5□□□□□ -1.05
VCL-206ENST00000623461 WDR5P61964 334 aaKnown RBP8.5□□□□□ -1.05
VCL-206ENST00000623461 DYRK1AQ13627 763 aa8.5□□□□□ -1.05
VCL-206ENST00000623461 TOMM20Q15388 145 aa8.5□□□□□ -1.05
VCL-206ENST00000623461 PCGF3Q3KNV8 242 aa8.5□□□□□ -1.05
VCL-206ENST00000623461 C14orf28Q4W4Y0 310 aa8.5□□□□□ -1.05
VCL-206ENST00000623461 KCTD18Q6PI47 426 aaPredicted RBP8.5□□□□□ -1.05
VCL-206ENST00000623461 ZNF550Q7Z398 422 aa8.5□□□□□ -1.05
VCL-206ENST00000623461 OR5W2Q8NH69 310 aa8.5□□□□□ -1.05
VCL-206ENST00000623461 SMPDL3AQ92484 453 aa8.5□□□□□ -1.05
VCL-206ENST00000623461 SLC22A18Q96BI1 424 aa8.5□□□□□ -1.05
VCL-206ENST00000623461 NOX3Q9HBY0 568 aa8.5□□□□□ -1.05
VCL-206ENST00000623461 DHDHQ9UQ10 334 aa8.5□□□□□ -1.05
VCL-206ENST00000623461 TUBAL3A6NHL2 446 aa8.5□□□□□ -1.05
VCL-206ENST00000623461 ADAM12O43184 909 aa8.5□□□□□ -1.05
VCL-206ENST00000623461 PEX14O75381 377 aa8.5□□□□□ -1.05
VCL-206ENST00000623461 SCG5P05408 212 aa8.5□□□□□ -1.05
VCL-206ENST00000623461 ALPIP09923 528 aa8.5□□□□□ -1.05
VCL-206ENST00000623461 ADORA3P0DMS8 318 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms