RNA–Protein interactions for RNA: ENST00000623342.1

SND1-IT1-201, SND1 intronic transcript 1, humanhuman

BASIC

Gene SND1-IT1, Length 2,481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1-201ENST00000623342 CSNK2A2P19784 350 aaPredicted RBP7.84□□□□□ -1.15
SND1-IT1-201ENST00000623342 CDH3P22223 829 aa7.84□□□□□ -1.15
SND1-IT1-201ENST00000623342 CERS1P27544 350 aa7.84□□□□□ -1.15
SND1-IT1-201ENST00000623342 CD40LGP29965 261 aa7.84□□□□□ -1.15
SND1-IT1-201ENST00000623342 NTSR1P30989 418 aa7.84□□□□□ -1.15
SND1-IT1-201ENST00000623342 PTGER1P34995 402 aa7.84□□□□□ -1.15
SND1-IT1-201ENST00000623342 FEN1P39748 380 aaKnown RBP7.84□□□□□ -1.15
SND1-IT1-201ENST00000623342 STXBP1P61764 594 aaKnown RBP7.84□□□□□ -1.15
SND1-IT1-201ENST00000623342 PRR5P85299 388 aa7.84□□□□□ -1.15
SND1-IT1-201ENST00000623342 ALDH6A1Q02252 535 aaKnown RBP7.84□□□□□ -1.15
SND1-IT1-201ENST00000623342 FUT5Q11128 374 aa7.84□□□□□ -1.15
SND1-IT1-201ENST00000623342 COX10Q12887 443 aa7.84□□□□□ -1.15
SND1-IT1-201ENST00000623342 LASP1Q14847 261 aaKnown RBP7.84□□□□□ -1.15
SND1-IT1-201ENST00000623342 NDUFA9Q16795 377 aa7.84□□□□□ -1.15
SND1-IT1-201ENST00000623342 ZNF750Q32MQ0 723 aa7.84□□□□□ -1.15
SND1-IT1-201ENST00000623342 TIMM50Q3ZCQ8 353 aa7.84□□□□□ -1.15
SND1-IT1-201ENST00000623342 MEDAGQ5VYS4 303 aa7.84□□□□□ -1.15
SND1-IT1-201ENST00000623342 C18orf63Q68DL7 685 aa7.84□□□□□ -1.15
SND1-IT1-201ENST00000623342 SDE2Q6IQ49 451 aa7.84□□□□□ -1.15
SND1-IT1-201ENST00000623342 ZNF425Q6IV72 752 aa7.84□□□□□ -1.15
SND1-IT1-201ENST00000623342 SLC48A1Q6P1K1 146 aa7.84□□□□□ -1.15
SND1-IT1-201ENST00000623342 SYCE2Q6PIF2 218 aa7.84□□□□□ -1.15
SND1-IT1-201ENST00000623342 OLIG3Q7RTU3 272 aa7.84□□□□□ -1.15
SND1-IT1-201ENST00000623342 KLHL6Q8WZ60 621 aa7.84□□□□□ -1.15
SND1-IT1-201ENST00000623342 OTUB1Q96FW1 271 aaPredicted RBP7.84□□□□□ -1.15
SND1-IT1-201ENST00000623342 OR5M11Q96RB7 305 aa7.84□□□□□ -1.15
SND1-IT1-201ENST00000623342 CHCHD6Q9BRQ6 235 aa7.84□□□□□ -1.15
SND1-IT1-201ENST00000623342 RPP25Q9BUL9 199 aaKnown RBP7.84□□□□□ -1.15
SND1-IT1-201ENST00000623342 ROGDIQ9GZN7 287 aa7.84□□□□□ -1.15
SND1-IT1-201ENST00000623342 NXF2Q9GZY0 626 aaKnown RBP7.84□□□□□ -1.15
SND1-IT1-201ENST00000623342 SLC6A17Q9H1V8 727 aa7.84□□□□□ -1.15
SND1-IT1-201ENST00000623342 FGF22Q9HCT0 170 aa7.84□□□□□ -1.15
SND1-IT1-201ENST00000623342 GIMAP4Q9NUV9 329 aa7.84□□□□□ -1.15
SND1-IT1-201ENST00000623342 PRSS38A1L453 326 aa7.84□□□□□ -1.16
SND1-IT1-201ENST00000623342 ISM1B1AKI9 464 aa7.84□□□□□ -1.16
SND1-IT1-201ENST00000623342 CCRL2O00421 344 aa7.84□□□□□ -1.16
SND1-IT1-201ENST00000623342 DSCR3O14972 297 aa7.84□□□□□ -1.16
SND1-IT1-201ENST00000623342 CASC3O15234 703 aaKnown RBP7.84□□□□□ -1.16
SND1-IT1-201ENST00000623342 SLC31A1O15431 190 aa7.84□□□□□ -1.16
SND1-IT1-201ENST00000623342 EMC8O43402 210 aa7.84□□□□□ -1.16
SND1-IT1-201ENST00000623342 PROM1O43490 865 aa7.84□□□□□ -1.16
SND1-IT1-201ENST00000623342 EPPINO95925 133 aa7.84□□□□□ -1.16
SND1-IT1-201ENST00000623342 TP53P04637 393 aaPredicted RBP7.84□□□□□ -1.16
SND1-IT1-201ENST00000623342 C8orf89P0DMQ9 161 aa7.84□□□□□ -1.16
SND1-IT1-201ENST00000623342 LAMP2P13473 410 aa7.84□□□□□ -1.16
SND1-IT1-201ENST00000623342 CSTF2P33240 577 aaKnown RBP eCLIP7.84□□□□□ -1.16
SND1-IT1-201ENST00000623342 MPIP34949 423 aa7.84□□□□□ -1.16
SND1-IT1-201ENST00000623342 BUD31P41223 144 aaPredicted RBP7.84□□□□□ -1.16
SND1-IT1-201ENST00000623342 RAB8AP61006 207 aa7.84□□□□□ -1.16
SND1-IT1-201ENST00000623342 RHAGQ02094 409 aa7.84□□□□□ -1.16
SND1-IT1-201ENST00000623342 RELAQ04206 551 aa7.84□□□□□ -1.16
SND1-IT1-201ENST00000623342 DUSP2Q05923 314 aa7.84□□□□□ -1.16
SND1-IT1-201ENST00000623342 TGM3Q08188 693 aa7.84□□□□□ -1.16
SND1-IT1-201ENST00000623342 NCF4Q15080 339 aa7.84□□□□□ -1.16
SND1-IT1-201ENST00000623342 TSTQ16762 297 aaKnown RBP7.84□□□□□ -1.16
SND1-IT1-201ENST00000623342 GPAT3Q53EU6 434 aa7.84□□□□□ -1.16
SND1-IT1-201ENST00000623342 TMEM196Q5HYL7 178 aa7.84□□□□□ -1.16
SND1-IT1-201ENST00000623342 PRAMEF8Q5VWM4 474 aa7.84□□□□□ -1.16
SND1-IT1-201ENST00000623342 PRAMEF7Q5VXH5 474 aa7.84□□□□□ -1.16
SND1-IT1-201ENST00000623342 ANKRD54Q6NXT1 300 aa7.84□□□□□ -1.16
SND1-IT1-201ENST00000623342 TUBA3EQ6PEY2 450 aa7.84□□□□□ -1.16
SND1-IT1-201ENST00000623342 C19orf48Q6RUI8 117 aa7.84□□□□□ -1.16
SND1-IT1-201ENST00000623342 TMEM107Q6UX40 140 aa7.84□□□□□ -1.16
SND1-IT1-201ENST00000623342 CD300LDQ6UXZ3 194 aa7.84□□□□□ -1.16
SND1-IT1-201ENST00000623342 SNX29P2Q8IUI4 249 aa7.84□□□□□ -1.16
SND1-IT1-201ENST00000623342 OR6T1Q8NGN1 323 aa7.84□□□□□ -1.16
SND1-IT1-201ENST00000623342 OR8J1Q8NGP2 316 aa7.84□□□□□ -1.16
SND1-IT1-201ENST00000623342 JPH3Q8WXH2 748 aaPredicted RBP7.84□□□□□ -1.16
SND1-IT1-201ENST00000623342 TMEM80Q96HE8 168 aa7.84□□□□□ -1.16
SND1-IT1-201ENST00000623342 PRRC1Q96M27 445 aa7.84□□□□□ -1.16
SND1-IT1-201ENST00000623342 OR2M4Q96R27 311 aa7.84□□□□□ -1.16
SND1-IT1-201ENST00000623342 GABRG3Q99928 467 aa7.84□□□□□ -1.16
SND1-IT1-201ENST00000623342 CENPOQ9BU64 300 aa7.84□□□□□ -1.16
SND1-IT1-201ENST00000623342 PINK1Q9BXM7 581 aa7.84□□□□□ -1.16
SND1-IT1-201ENST00000623342 C6orf62Q9GZU0 229 aaPredicted RBP7.84□□□□□ -1.16
SND1-IT1-201ENST00000623342 LYARQ9NX58 379 aaKnown RBP7.84□□□□□ -1.16
SND1-IT1-201ENST00000623342 GIN1Q9NXP7 522 aa7.84□□□□□ -1.16
SND1-IT1-201ENST00000623342 OR6C2Q9NZP2 312 aa7.84□□□□□ -1.16
SND1-IT1-201ENST00000623342 DNAJC27Q9NZQ0 273 aa7.84□□□□□ -1.16
SND1-IT1-201ENST00000623342 APOBEC3BQ9UH17 382 aaKnown RBP7.84□□□□□ -1.16
SND1-IT1-201ENST00000623342 DOLKQ9UPQ8 538 aa7.84□□□□□ -1.16
SND1-IT1-201ENST00000623342 KLHL20Q9Y2M5 609 aa7.84□□□□□ -1.16
SND1-IT1-201ENST00000623342 RPL36Q9Y3U8 105 aaKnown RBP7.84□□□□□ -1.16
SND1-IT1-201ENST00000623342 AGAP5A6NIR3 686 aa7.83□□□□□ -1.16
SND1-IT1-201ENST00000623342 BOLA2-SMG1P6H3BVE0 249 aa7.83□□□□□ -1.16
SND1-IT1-201ENST00000623342 TAF4O00268 1085 aa7.83□□□□□ -1.16
SND1-IT1-201ENST00000623342 LINC01565O15544 149 aa7.83□□□□□ -1.16
SND1-IT1-201ENST00000623342 TPST2O60704 377 aa7.83□□□□□ -1.16
SND1-IT1-201ENST00000623342 ASGR2P07307 311 aa7.83□□□□□ -1.16
SND1-IT1-201ENST00000623342 CHRM5P08912 532 aaPredicted RBP7.83□□□□□ -1.16
SND1-IT1-201ENST00000623342 ALOX5P09917 674 aa7.83□□□□□ -1.16
SND1-IT1-201ENST00000623342 TNNI3P19429 210 aa7.83□□□□□ -1.16
SND1-IT1-201ENST00000623342 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.83□□□□□ -1.16
SND1-IT1-201ENST00000623342 CEBPEQ15744 281 aa7.83□□□□□ -1.16
SND1-IT1-201ENST00000623342 OCLNQ16625 522 aa7.83□□□□□ -1.16
SND1-IT1-201ENST00000623342 SOWAHCQ53LP3 525 aaPredicted RBP7.83□□□□□ -1.16
SND1-IT1-201ENST00000623342 TJAP1Q5JTD0 557 aa7.83□□□□□ -1.16
SND1-IT1-201ENST00000623342 ATAT1Q5SQI0 421 aa7.83□□□□□ -1.16
SND1-IT1-201ENST00000623342 MFSD4BQ5TF39 518 aa7.83□□□□□ -1.16
SND1-IT1-201ENST00000623342 TMEM184AQ6ZMB5 413 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms