RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 KIR2DS3Q14952 304 aa9.88□□□□□ -0.83
VPS11-208ENST00000621676 DUSP5Q16690 384 aa9.88□□□□□ -0.83
VPS11-208ENST00000621676 OR2T5Q6IEZ7 315 aa9.88□□□□□ -0.83
VPS11-208ENST00000621676 TLDC1Q6P9B6 456 aa9.88□□□□□ -0.83
VPS11-208ENST00000621676 ARL10Q8N8L6 244 aa9.88□□□□□ -0.83
VPS11-208ENST00000621676 MFSD9Q8NBP5 474 aa9.88□□□□□ -0.83
VPS11-208ENST00000621676 PIK3C3Q8NEB9 887 aa9.88□□□□□ -0.83
VPS11-208ENST00000621676 OR2T29Q8NH02 315 aa9.88□□□□□ -0.83
VPS11-208ENST00000621676 EDAQ92838 391 aa9.88□□□□□ -0.83
VPS11-208ENST00000621676 RAB11FIP5Q9BXF6 653 aa9.88□□□□□ -0.83
VPS11-208ENST00000621676 ZBTB20Q9HC78 741 aaPredicted RBP9.88□□□□□ -0.83
VPS11-208ENST00000621676 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.88□□□□□ -0.83
VPS11-208ENST00000621676 GPR52Q9Y2T5 361 aa9.88□□□□□ -0.83
VPS11-208ENST00000621676 OR2A25A4D2G3 310 aa9.87□□□□□ -0.83
VPS11-208ENST00000621676 ZNF749O43361 778 aa9.87□□□□□ -0.83
VPS11-208ENST00000621676 CLPTM1O96005 669 aa9.87□□□□□ -0.83
VPS11-208ENST00000621676 IGFBP5P24593 272 aa9.87□□□□□ -0.83
VPS11-208ENST00000621676 CHN2P52757 468 aa9.87□□□□□ -0.83
VPS11-208ENST00000621676 RPS15AP62244 130 aaKnown RBP9.87□□□□□ -0.83
VPS11-208ENST00000621676 RAPSNQ13702 412 aa9.87□□□□□ -0.83
VPS11-208ENST00000621676 NSDHLQ15738 373 aa9.87□□□□□ -0.83
VPS11-208ENST00000621676 WDR45BQ5MNZ6 344 aa9.87□□□□□ -0.83
VPS11-208ENST00000621676 SLC35F1Q5T1Q4 408 aa9.87□□□□□ -0.83
VPS11-208ENST00000621676 LRIF1Q5T3J3 769 aa9.87□□□□□ -0.83
VPS11-208ENST00000621676 GALNT18Q6P9A2 607 aa9.87□□□□□ -0.83
VPS11-208ENST00000621676 TMCO5AQ8N6Q1 288 aa9.87□□□□□ -0.83
VPS11-208ENST00000621676 SLC38A9Q8NBW4 561 aa9.87□□□□□ -0.83
VPS11-208ENST00000621676 OR52R1Q8NGF1 315 aa9.87□□□□□ -0.83
VPS11-208ENST00000621676 OR6T1Q8NGN1 323 aa9.87□□□□□ -0.83
VPS11-208ENST00000621676 SLC39A7Q92504 469 aa9.87□□□□□ -0.83
VPS11-208ENST00000621676 AMBRA1Q9C0C7 1298 aa9.87□□□□□ -0.83
VPS11-208ENST00000621676 BHLHE41Q9C0J9 482 aaPredicted RBP9.87□□□□□ -0.83
VPS11-208ENST00000621676 DDX31Q9H8H2 851 aaKnown RBP9.87□□□□□ -0.83
VPS11-208ENST00000621676 FBRSQ9HAH7 460 aa9.87□□□□□ -0.83
VPS11-208ENST00000621676 KRT84Q9NSB2 600 aa9.87□□□□□ -0.83
VPS11-208ENST00000621676 SMPD3Q9NY59 655 aaPredicted RBP9.87□□□□□ -0.83
VPS11-208ENST00000621676 TAS2R16Q9NYV7 291 aa9.87□□□□□ -0.83
VPS11-208ENST00000621676 KIR2DS5A0A0G2JLQ3 304 aa9.87□□□□□ -0.83
VPS11-208ENST00000621676 A0A0G2JNG1 304 aa9.87□□□□□ -0.83
VPS11-208ENST00000621676 H3BSA7 217 aa9.87□□□□□ -0.83
VPS11-208ENST00000621676 KIR2DS3K7RE56 304 aa9.87□□□□□ -0.83
VPS11-208ENST00000621676 SCELO95171 688 aa9.87□□□□□ -0.83
VPS11-208ENST00000621676 GPIP06744 558 aa9.87□□□□□ -0.83
VPS11-208ENST00000621676 CCL4P13236 92 aa9.87□□□□□ -0.83
VPS11-208ENST00000621676 HSD3B1P14060 373 aa9.87□□□□□ -0.83
VPS11-208ENST00000621676 HSD3B2P26439 372 aa9.87□□□□□ -0.83
VPS11-208ENST00000621676 UBE2IP63279 158 aaKnown RBP9.87□□□□□ -0.83
VPS11-208ENST00000621676 TGM3Q08188 693 aa9.87□□□□□ -0.83
VPS11-208ENST00000621676 PUM1Q14671 1186 aaKnown RBP eCLIP9.87□□□□□ -0.83
VPS11-208ENST00000621676 KIR2DS5Q14953 304 aa9.87□□□□□ -0.83
VPS11-208ENST00000621676 ZNF311Q5JNZ3 666 aa9.87□□□□□ -0.83
VPS11-208ENST00000621676 CWF19L1Q69YN2 538 aaKnown RBP9.87□□□□□ -0.83
VPS11-208ENST00000621676 ABHD13Q7L211 337 aa9.87□□□□□ -0.83
VPS11-208ENST00000621676 RRM2BQ7LG56 351 aa9.87□□□□□ -0.83
VPS11-208ENST00000621676 SHFQ7M4L6 423 aa9.87□□□□□ -0.83
VPS11-208ENST00000621676 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.87□□□□□ -0.83
VPS11-208ENST00000621676 TSPYL5Q86VY4 417 aaPredicted RBP9.87□□□□□ -0.83
VPS11-208ENST00000621676 CARM1Q86X55 608 aa9.87□□□□□ -0.83
VPS11-208ENST00000621676 GALNT12Q8IXK2 581 aa9.87□□□□□ -0.83
VPS11-208ENST00000621676 COX18Q8N8Q8 333 aa9.87□□□□□ -0.83
VPS11-208ENST00000621676 SMAP2Q8WU79 429 aaPredicted RBP9.87□□□□□ -0.83
VPS11-208ENST00000621676 LZICQ8WZA0 190 aa9.87□□□□□ -0.83
VPS11-208ENST00000621676 ELP4Q96EB1 424 aa9.87□□□□□ -0.83
VPS11-208ENST00000621676 C9orf16Q9BUW7 83 aa9.87□□□□□ -0.83
VPS11-208ENST00000621676 SEMA6CQ9H3T2 930 aa9.87□□□□□ -0.83
VPS11-208ENST00000621676 NCDNQ9UBB6 729 aa9.87□□□□□ -0.83
VPS11-208ENST00000621676 PCDHGA8Q9Y5G5 932 aa9.87□□□□□ -0.83
VPS11-208ENST00000621676 PLXNA2O75051 1894 aa9.87□□□□□ -0.83
VPS11-208ENST00000621676 SMIM30A4D0T7 59 aa9.87□□□□□ -0.83
VPS11-208ENST00000621676 G3V3Y1 287 aa9.87□□□□□ -0.83
VPS11-208ENST00000621676 KRT75O95678 551 aa9.87□□□□□ -0.83
VPS11-208ENST00000621676 THRBP10828 461 aa9.87□□□□□ -0.83
VPS11-208ENST00000621676 CCL7P80098 99 aa9.87□□□□□ -0.83
VPS11-208ENST00000621676 TARDBPQ13148 414 aaKnown RBP eCLIP9.87□□□□□ -0.83
VPS11-208ENST00000621676 DPY19L1Q2PZI1 675 aa9.87□□□□□ -0.83
VPS11-208ENST00000621676 C14orf28Q4W4Y0 310 aa9.87□□□□□ -0.83
VPS11-208ENST00000621676 ARHGAP40Q5TG30 622 aa9.87□□□□□ -0.83
VPS11-208ENST00000621676 SLC48A1Q6P1K1 146 aa9.87□□□□□ -0.83
VPS11-208ENST00000621676 LGI4Q8N135 537 aa9.87□□□□□ -0.83
VPS11-208ENST00000621676 OR52N2Q8NGI0 321 aa9.87□□□□□ -0.83
VPS11-208ENST00000621676 OR51Q1Q8NH59 317 aa9.87□□□□□ -0.83
VPS11-208ENST00000621676 FLVCR1-AS1Q8TAF5 88 aa9.87□□□□□ -0.83
VPS11-208ENST00000621676 ZUFSPQ96AP4 578 aa9.87□□□□□ -0.83
VPS11-208ENST00000621676 SLC35A4Q96G79 324 aa9.87□□□□□ -0.83
VPS11-208ENST00000621676 OR7D2Q96RA2 312 aa9.87□□□□□ -0.83
VPS11-208ENST00000621676 TRIM4Q9C037 500 aa9.87□□□□□ -0.83
VPS11-208ENST00000621676 DMTF1Q9Y222 760 aa9.87□□□□□ -0.83
VPS11-208ENST00000621676 ICE1Q9Y2F5 2266 aa9.87□□□□□ -0.83
VPS11-208ENST00000621676 GPR89AB7ZAQ6 455 aa9.86□□□□□ -0.83
VPS11-208ENST00000621676 LMO7DNF2Z398 122 aa9.86□□□□□ -0.83
VPS11-208ENST00000621676 DLGAP1O14490 977 aa9.86□□□□□ -0.83
VPS11-208ENST00000621676 GPR89BP0CG08 455 aa9.86□□□□□ -0.83
VPS11-208ENST00000621676 UQCRC2P22695 453 aa9.86□□□□□ -0.83
VPS11-208ENST00000621676 DAPP51397 102 aa9.86□□□□□ -0.83
VPS11-208ENST00000621676 CCR3P51677 355 aa9.86□□□□□ -0.83
VPS11-208ENST00000621676 SNTA1Q13424 505 aa9.86□□□□□ -0.83
VPS11-208ENST00000621676 REEP3Q6NUK4 255 aa9.86□□□□□ -0.83
VPS11-208ENST00000621676 LRRC25Q8N386 305 aaPredicted RBP9.86□□□□□ -0.83
VPS11-208ENST00000621676 AQP11Q8NBQ7 271 aa9.86□□□□□ -0.83
VPS11-208ENST00000621676 C7orf57Q8NEG2 295 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms