RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 SIRT3Q9NTG7 399 aaPredicted RBP13.25□□□□□ -0.29
CBWD3-217ENST00000621474 ACSS1Q9NUB1 689 aaPredicted RBP13.25□□□□□ -0.29
CBWD3-217ENST00000621474 LUZP4Q9P127 313 aa13.25□□□□□ -0.29
CBWD3-217ENST00000621474 SHANK1Q9Y566 2161 aa13.25□□□□□ -0.29
CBWD3-217ENST00000621474 A0A087WV62 115 aa13.24□□□□□ -0.29
CBWD3-217ENST00000621474 DYTNA2CJ06 578 aa13.24□□□□□ -0.29
CBWD3-217ENST00000621474 UPK1AO00322 258 aa13.24□□□□□ -0.29
CBWD3-217ENST00000621474 SCN2BO60939 215 aa13.24□□□□□ -0.29
CBWD3-217ENST00000621474 RPL3P39023 403 aaKnown RBP13.24□□□□□ -0.29
CBWD3-217ENST00000621474 ZFP36L2P47974 494 aaKnown RBP13.24□□□□□ -0.29
CBWD3-217ENST00000621474 CDK9P50750 372 aaKnown RBP13.24□□□□□ -0.29
CBWD3-217ENST00000621474 WNT3P56703 355 aa13.24□□□□□ -0.29
CBWD3-217ENST00000621474 UFM1P61960 85 aa13.24□□□□□ -0.29
CBWD3-217ENST00000621474 HSPB3Q12988 150 aa13.24□□□□□ -0.29
CBWD3-217ENST00000621474 NXNQ6DKJ4 435 aa13.24□□□□□ -0.29
CBWD3-217ENST00000621474 SPINK14Q6IE38 97 aa13.24□□□□□ -0.29
CBWD3-217ENST00000621474 OR2L13Q8N349 312 aa13.24□□□□□ -0.29
CBWD3-217ENST00000621474 TEX19Q8NA77 164 aa13.24□□□□□ -0.29
CBWD3-217ENST00000621474 OR5L2Q8NGL0 311 aa13.24□□□□□ -0.29
CBWD3-217ENST00000621474 RFWD2Q8NHY2 731 aa13.24□□□□□ -0.29
CBWD3-217ENST00000621474 TESCQ96BS2 214 aa13.24□□□□□ -0.29
CBWD3-217ENST00000621474 ERP27Q96DN0 273 aa13.24□□□□□ -0.29
CBWD3-217ENST00000621474 ELP4Q96EB1 424 aa13.24□□□□□ -0.29
CBWD3-217ENST00000621474 ZBED6CLQ96FA7 236 aaPredicted RBP13.24□□□□□ -0.29
CBWD3-217ENST00000621474 GAL3ST4Q96RP7 486 aa13.24□□□□□ -0.29
CBWD3-217ENST00000621474 TRIM4Q9C037 500 aa13.24□□□□□ -0.29
CBWD3-217ENST00000621474 TCF7L2Q9NQB0 619 aa13.24□□□□□ -0.29
CBWD3-217ENST00000621474 FGFR1OP2Q9NVK5 253 aa13.24□□□□□ -0.29
CBWD3-217ENST00000621474 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.24□□□□□ -0.29
CBWD3-217ENST00000621474 YARS2Q9Y2Z4 477 aaKnown RBP13.24□□□□□ -0.29
CBWD3-217ENST00000621474 ZNF462Q96JM2 2506 aa13.24□□□□□ -0.29
CBWD3-217ENST00000621474 PRRC2CQ9Y520 2896 aaKnown RBP13.24□□□□□ -0.29
CBWD3-217ENST00000621474 NBASA2RRP1 2371 aa13.24□□□□□ -0.29
CBWD3-217ENST00000621474 C9JVG2 144 aa13.24□□□□□ -0.29
CBWD3-217ENST00000621474 FCHO1O14526 889 aa13.24□□□□□ -0.29
CBWD3-217ENST00000621474 SUV39H1O43463 412 aa13.24□□□□□ -0.29
CBWD3-217ENST00000621474 PRAMEF2O60811 474 aa13.24□□□□□ -0.29
CBWD3-217ENST00000621474 OR6B1O95007 311 aa13.24□□□□□ -0.29
CBWD3-217ENST00000621474 SOX3P41225 446 aa13.24□□□□□ -0.29
CBWD3-217ENST00000621474 NME5P56597 212 aa13.24□□□□□ -0.29
CBWD3-217ENST00000621474 MLC1Q15049 377 aa13.24□□□□□ -0.29
CBWD3-217ENST00000621474 TLR1Q15399 786 aa13.24□□□□□ -0.29
CBWD3-217ENST00000621474 PIGGQ5H8A4 983 aa13.24□□□□□ -0.29
CBWD3-217ENST00000621474 CPTPQ5TA50 214 aa13.24□□□□□ -0.29
CBWD3-217ENST00000621474 C6orf163Q5TEZ5 329 aa13.24□□□□□ -0.29
CBWD3-217ENST00000621474 SLC29A4Q7RTT9 530 aa13.24□□□□□ -0.29
CBWD3-217ENST00000621474 OR8J2Q8NGG1 315 aa13.24□□□□□ -0.29
CBWD3-217ENST00000621474 ZNF317Q96PQ6 595 aaPredicted RBP13.24□□□□□ -0.29
CBWD3-217ENST00000621474 ITPAQ9BY32 194 aa13.24□□□□□ -0.29
CBWD3-217ENST00000621474 HES7Q9BYE0 225 aa13.24□□□□□ -0.29
CBWD3-217ENST00000621474 DPY30Q9C005 99 aa13.24□□□□□ -0.29
CBWD3-217ENST00000621474 BHLHE41Q9C0J9 482 aaPredicted RBP13.24□□□□□ -0.29
CBWD3-217ENST00000621474 NPHS2Q9NP85 383 aa13.24□□□□□ -0.29
CBWD3-217ENST00000621474 SDR39U1Q9NRG7 319 aaPredicted RBP13.24□□□□□ -0.29
CBWD3-217ENST00000621474 ANAPC2Q9UJX6 822 aa13.24□□□□□ -0.29
CBWD3-217ENST00000621474 C19orf53Q9UNZ5 99 aaPredicted RBP13.24□□□□□ -0.29
CBWD3-217ENST00000621474 C2orf92A0A1B0GVN3 265 aa13.23□□□□□ -0.29
CBWD3-217ENST00000621474 B8ZZF3 427 aa13.23□□□□□ -0.29
CBWD3-217ENST00000621474 E9PBE3 544 aa13.23□□□□□ -0.29
CBWD3-217ENST00000621474 SLITRK5O94991 958 aa13.23□□□□□ -0.29
CBWD3-217ENST00000621474 IFI6P09912 130 aa13.23□□□□□ -0.29
CBWD3-217ENST00000621474 HLCSP50747 726 aa13.23□□□□□ -0.29
CBWD3-217ENST00000621474 SSR4P51571 173 aa13.23□□□□□ -0.29
CBWD3-217ENST00000621474 MANFP55145 182 aaKnown RBP13.23□□□□□ -0.29
CBWD3-217ENST00000621474 ZNF169Q14929 603 aaPredicted RBP13.23□□□□□ -0.29
CBWD3-217ENST00000621474 OR1C1Q15619 314 aa13.23□□□□□ -0.29
CBWD3-217ENST00000621474 SPANXN4Q5MJ08 99 aa13.23□□□□□ -0.29
CBWD3-217ENST00000621474 OR4F3Q6IEY1 312 aa13.23□□□□□ -0.29
CBWD3-217ENST00000621474 C17orf47Q8NEP4 570 aa13.23□□□□□ -0.29
CBWD3-217ENST00000621474 PSMA8Q8TAA3 256 aa13.23□□□□□ -0.29
CBWD3-217ENST00000621474 STON2Q8WXE9 905 aa13.23□□□□□ -0.29
CBWD3-217ENST00000621474 VSTM2LQ96N03 204 aa13.23□□□□□ -0.29
CBWD3-217ENST00000621474 UTP23Q9BRU9 249 aaKnown RBP13.23□□□□□ -0.29
CBWD3-217ENST00000621474 DUSP26Q9BV47 211 aa13.23□□□□□ -0.29
CBWD3-217ENST00000621474 NXF5Q9H1B4 397 aaKnown RBP13.23□□□□□ -0.29
CBWD3-217ENST00000621474 NTMQ9P121 344 aa13.23□□□□□ -0.29
CBWD3-217ENST00000621474 LRFN1Q9P244 771 aa13.23□□□□□ -0.29
CBWD3-217ENST00000621474 ABI3Q9P2A4 366 aa13.23□□□□□ -0.29
CBWD3-217ENST00000621474 BCAP29Q9UHQ4 241 aa13.23□□□□□ -0.29
CBWD3-217ENST00000621474 PCDHGA10Q9Y5H3 936 aa13.23□□□□□ -0.29
CBWD3-217ENST00000621474 HEMK1Q9Y5R4 338 aaPredicted RBP13.23□□□□□ -0.29
CBWD3-217ENST00000621474 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.22□□□□□ -0.29
CBWD3-217ENST00000621474 A0A1W2PRB8 838 aa13.22□□□□□ -0.29
CBWD3-217ENST00000621474 CDK2AP1O14519 115 aa13.22□□□□□ -0.29
CBWD3-217ENST00000621474 UBDO15205 165 aa13.22□□□□□ -0.29
CBWD3-217ENST00000621474 POLR3GO15318 223 aaPredicted RBP13.22□□□□□ -0.29
CBWD3-217ENST00000621474 CT45A8P0DMV1 189 aa13.22□□□□□ -0.29
CBWD3-217ENST00000621474 CT45A9P0DMV2 189 aa13.22□□□□□ -0.29
CBWD3-217ENST00000621474 IDO1P14902 403 aa13.22□□□□□ -0.29
CBWD3-217ENST00000621474 CASRP41180 1078 aa13.22□□□□□ -0.29
CBWD3-217ENST00000621474 CYB561P49447 251 aa13.22□□□□□ -0.29
CBWD3-217ENST00000621474 NR0B1P51843 470 aaKnown RBP13.22□□□□□ -0.29
CBWD3-217ENST00000621474 PSG6Q00889 435 aa13.22□□□□□ -0.29
CBWD3-217ENST00000621474 PDCD4Q53EL6 469 aaKnown RBP13.22□□□□□ -0.29
CBWD3-217ENST00000621474 CT45A2Q5DJT8 189 aa13.22□□□□□ -0.29
CBWD3-217ENST00000621474 NPSR1Q6W5P4 371 aa13.22□□□□□ -0.29
CBWD3-217ENST00000621474 ACAD11Q709F0 780 aa13.22□□□□□ -0.29
CBWD3-217ENST00000621474 MDGA2Q7Z553 956 aa13.22□□□□□ -0.29
CBWD3-217ENST00000621474 CLECL1Q8IZS7 167 aa13.22□□□□□ -0.29
CBWD3-217ENST00000621474 OR9I1Q8NGQ6 314 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms