RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 PAK6Q9NQU5 681 aaPredicted RBP12.47□□□□□ -0.41
MSH6-214ENST00000616033 ZDHHC3Q9NYG2 299 aa12.47□□□□□ -0.41
MSH6-214ENST00000616033 CXXC1Q9P0U4 656 aaPredicted RBP12.47□□□□□ -0.41
MSH6-214ENST00000616033 LSM2Q9Y333 95 aaKnown RBP12.47□□□□□ -0.41
MSH6-214ENST00000616033 ELK1P19419 428 aa12.47□□□□□ -0.41
MSH6-214ENST00000616033 PDHA2P29803 388 aa12.47□□□□□ -0.41
MSH6-214ENST00000616033 VIPR1P32241 457 aa12.47□□□□□ -0.41
MSH6-214ENST00000616033 CAP1Q01518 475 aa12.47□□□□□ -0.41
MSH6-214ENST00000616033 FGL2Q14314 439 aa12.47□□□□□ -0.41
MSH6-214ENST00000616033 SLBPQ14493 270 aaKnown RBP eCLIP12.47□□□□□ -0.41
MSH6-214ENST00000616033 C21orf62-AS1Q17RA5 79 aa12.47□□□□□ -0.41
MSH6-214ENST00000616033 C17orf107Q6ZR85 190 aa12.47□□□□□ -0.41
MSH6-214ENST00000616033 RRM2BQ7LG56 351 aa12.47□□□□□ -0.41
MSH6-214ENST00000616033 ZNF467Q7Z7K2 595 aaPredicted RBP12.47□□□□□ -0.41
MSH6-214ENST00000616033 SYT9Q86SS6 491 aa12.47□□□□□ -0.41
MSH6-214ENST00000616033 HORMAD2Q8N7B1 307 aa12.47□□□□□ -0.41
MSH6-214ENST00000616033 ZFPM2Q8WW38 1151 aa12.47□□□□□ -0.41
MSH6-214ENST00000616033 TOE1Q96GM8 510 aaKnown RBP12.47□□□□□ -0.41
MSH6-214ENST00000616033 SENP5Q96HI0 755 aaPredicted RBP12.47□□□□□ -0.41
MSH6-214ENST00000616033 FUBP3Q96I24 572 aaKnown RBP eCLIP12.47□□□□□ -0.41
MSH6-214ENST00000616033 FCRL4Q96PJ5 515 aa12.47□□□□□ -0.41
MSH6-214ENST00000616033 FNDC11Q9BVV2 318 aa12.47□□□□□ -0.41
MSH6-214ENST00000616033 POLMQ9NP87 494 aaPredicted RBP12.47□□□□□ -0.41
MSH6-214ENST00000616033 CORO2BQ9UQ03 480 aa12.47□□□□□ -0.41
MSH6-214ENST00000616033 UNC80Q8N2C7 3258 aa12.46□□□□□ -0.41
MSH6-214ENST00000616033 GLOD5A6NK44 160 aa12.46□□□□□ -0.41
MSH6-214ENST00000616033 ANHXE9PGG2 379 aa12.46□□□□□ -0.41
MSH6-214ENST00000616033 PPIBP23284 216 aaKnown RBP12.46□□□□□ -0.41
MSH6-214ENST00000616033 ELAVL4P26378 380 aaKnown RBP12.46□□□□□ -0.41
MSH6-214ENST00000616033 TIA1P31483 386 aaKnown RBP eCLIP12.46□□□□□ -0.41
MSH6-214ENST00000616033 EPHA5P54756 1037 aa12.46□□□□□ -0.41
MSH6-214ENST00000616033 WNT4P56705 351 aa12.46□□□□□ -0.41
MSH6-214ENST00000616033 PRSS53Q2L4Q9 553 aa12.46□□□□□ -0.41
MSH6-214ENST00000616033 SYT14P1Q58G82 188 aa12.46□□□□□ -0.41
MSH6-214ENST00000616033 SMARCD3Q6STE5 483 aa12.46□□□□□ -0.41
MSH6-214ENST00000616033 TEX261Q6UWH6 196 aa12.46□□□□□ -0.41
MSH6-214ENST00000616033 MACC1Q6ZN28 852 aa12.46□□□□□ -0.41
MSH6-214ENST00000616033 OR52N2Q8NGI0 321 aa12.46□□□□□ -0.41
MSH6-214ENST00000616033 OR4D11Q8NGI4 311 aa12.46□□□□□ -0.41
MSH6-214ENST00000616033 KLK6Q92876 244 aa12.46□□□□□ -0.41
MSH6-214ENST00000616033 TMEM159Q96B96 161 aa12.46□□□□□ -0.41
MSH6-214ENST00000616033 OR4K3Q96R72 315 aa12.46□□□□□ -0.41
MSH6-214ENST00000616033 PLA2G12AQ9BZM1 189 aa12.46□□□□□ -0.41
MSH6-214ENST00000616033 REEP4Q9H6H4 257 aa12.46□□□□□ -0.41
MSH6-214ENST00000616033 PLAGL1Q9UM63 463 aa12.46□□□□□ -0.41
MSH6-214ENST00000616033 SH2B3Q9UQQ2 575 aa12.46□□□□□ -0.41
MSH6-214ENST00000616033 U3KQ87 197 aa12.46□□□□□ -0.41
MSH6-214ENST00000616033 CNTRLQ7Z7A1 2325 aa12.46□□□□□ -0.41
MSH6-214ENST00000616033 SEMA7AO75326 666 aa12.46□□□□□ -0.41
MSH6-214ENST00000616033 IGLV3-27P01718 113 aa12.46□□□□□ -0.41
MSH6-214ENST00000616033 C1SP09871 688 aa12.46□□□□□ -0.41
MSH6-214ENST00000616033 TRAPPC2P0DI81 140 aa12.46□□□□□ -0.41
MSH6-214ENST00000616033 TRAPPC2BP0DI82 140 aa12.46□□□□□ -0.41
MSH6-214ENST00000616033 AKR1A1P14550 325 aa12.46□□□□□ -0.41
MSH6-214ENST00000616033 TALDO1P37837 337 aa12.46□□□□□ -0.41
MSH6-214ENST00000616033 GDI2P50395 445 aaKnown RBP12.46□□□□□ -0.41
MSH6-214ENST00000616033 MVDP53602 400 aa12.46□□□□□ -0.41
MSH6-214ENST00000616033 PER3P56645 1201 aa12.46□□□□□ -0.41
MSH6-214ENST00000616033 DSC1Q08554 894 aa12.46□□□□□ -0.41
MSH6-214ENST00000616033 MGAT3Q09327 533 aa12.46□□□□□ -0.41
MSH6-214ENST00000616033 KLHL12Q53G59 568 aa12.46□□□□□ -0.41
MSH6-214ENST00000616033 KIAA1841Q6NSI8 718 aa12.46□□□□□ -0.41
MSH6-214ENST00000616033 SLC30A6Q6NXT4 461 aa12.46□□□□□ -0.41
MSH6-214ENST00000616033 C17orf99Q6UX52 265 aa12.46□□□□□ -0.41
MSH6-214ENST00000616033 Q6ZVL8 140 aa12.46□□□□□ -0.41
MSH6-214ENST00000616033 LRRTM4Q86VH4 590 aa12.46□□□□□ -0.41
MSH6-214ENST00000616033 ARL14EPQ8N8R7 260 aaPredicted RBP12.46□□□□□ -0.41
MSH6-214ENST00000616033 L3MBTL4Q8NA19 623 aa12.46□□□□□ -0.41
MSH6-214ENST00000616033 SLC6A16Q9GZN6 736 aa12.46□□□□□ -0.41
MSH6-214ENST00000616033 C1GALT1Q9NS00 363 aa12.46□□□□□ -0.41
MSH6-214ENST00000616033 PLXNB2O15031 1838 aa12.46□□□□□ -0.42
MSH6-214ENST00000616033 TDRD15B5MCY1 1934 aaKnown RBP12.46□□□□□ -0.42
MSH6-214ENST00000616033 A0A0B4J203 849 aa12.46□□□□□ -0.42
MSH6-214ENST00000616033 ZC3H12DA2A288 527 aaKnown RBP12.46□□□□□ -0.42
MSH6-214ENST00000616033 MANSC4A6NHS7 340 aaPredicted RBP12.46□□□□□ -0.42
MSH6-214ENST00000616033 CHURC1-FNTBB4DL54 471 aa12.46□□□□□ -0.42
MSH6-214ENST00000616033 OAZ2O95190 189 aa12.46□□□□□ -0.42
MSH6-214ENST00000616033 CFDP00746 253 aaPredicted RBP12.46□□□□□ -0.42
MSH6-214ENST00000616033 ASGR1P07306 291 aa12.46□□□□□ -0.42
MSH6-214ENST00000616033 ATXN8OSP0DMR3 200 aa12.46□□□□□ -0.42
MSH6-214ENST00000616033 GIFP27352 417 aa12.46□□□□□ -0.42
MSH6-214ENST00000616033 ASMTP46597 345 aa12.46□□□□□ -0.42
MSH6-214ENST00000616033 DGKGP49619 791 aa12.46□□□□□ -0.42
MSH6-214ENST00000616033 MAP2K6P52564 334 aa12.46□□□□□ -0.42
MSH6-214ENST00000616033 HTRA3P83110 453 aa12.46□□□□□ -0.42
MSH6-214ENST00000616033 RING1Q06587 406 aa12.46□□□□□ -0.42
MSH6-214ENST00000616033 SYPL1Q16563 259 aa12.46□□□□□ -0.42
MSH6-214ENST00000616033 NTRK2Q16620 822 aa12.46□□□□□ -0.42
MSH6-214ENST00000616033 RAET1GQ6H3X3 334 aa12.46□□□□□ -0.42
MSH6-214ENST00000616033 TCTN3Q6NUS6 607 aa12.46□□□□□ -0.42
MSH6-214ENST00000616033 PODNL1Q6PEZ8 512 aa12.46□□□□□ -0.42
MSH6-214ENST00000616033 SLC38A5Q8WUX1 472 aa12.46□□□□□ -0.42
MSH6-214ENST00000616033 POP5Q969H6 163 aaKnown RBP12.46□□□□□ -0.42
MSH6-214ENST00000616033 MS4A3Q96HJ5 214 aa12.46□□□□□ -0.42
MSH6-214ENST00000616033 SERHL2Q9H4I8 314 aa12.46□□□□□ -0.42
MSH6-214ENST00000616033 NIPAL2Q9H841 368 aa12.46□□□□□ -0.42
MSH6-214ENST00000616033 RDH14Q9HBH5 336 aa12.46□□□□□ -0.42
MSH6-214ENST00000616033 DHFRP00374 187 aa12.45□□□□□ -0.42
MSH6-214ENST00000616033 CAPZA2P47755 286 aa12.45□□□□□ -0.42
MSH6-214ENST00000616033 FKBP1BP68106 108 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms