RNA–Protein interactions for RNA: ENST00000615798.4

COL12A1-211, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 11,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-211ENST00000615798 OR13C5Q8NGS8 318 aa8.89□□□□□ -0.99
COL12A1-211ENST00000615798 ST8SIA4Q92187 359 aa8.89□□□□□ -0.99
COL12A1-211ENST00000615798 EFCAB11Q9BUY7 163 aa8.89□□□□□ -0.99
COL12A1-211ENST00000615798 GBA3Q9H227 469 aa8.89□□□□□ -0.99
COL12A1-211ENST00000615798 ASB6Q9NWX5 421 aa8.89□□□□□ -0.99
COL12A1-211ENST00000615798 MSCO60682 206 aa8.89□□□□□ -0.99
COL12A1-211ENST00000615798 IL7RP16871 459 aa8.89□□□□□ -0.99
COL12A1-211ENST00000615798 FRKP42685 505 aaPredicted RBP8.89□□□□□ -0.99
COL12A1-211ENST00000615798 PPT1P50897 306 aa8.89□□□□□ -0.99
COL12A1-211ENST00000615798 YBEYP58557 167 aaPredicted RBP8.89□□□□□ -0.99
COL12A1-211ENST00000615798 EVA1BQ9NVM1 165 aa8.89□□□□□ -0.99
COL12A1-211ENST00000615798 DNMT3AQ9Y6K1 912 aaPredicted RBP8.89□□□□□ -0.99
COL12A1-211ENST00000615798 RGPD5Q99666 1765 aa8.89□□□□□ -0.99
COL12A1-211ENST00000615798 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.89□□□□□ -0.99
COL12A1-211ENST00000615798 ANKRD34BA5PLL1 514 aa8.89□□□□□ -0.99
COL12A1-211ENST00000615798 YBX3P16989 372 aaKnown RBP eCLIP8.89□□□□□ -0.99
COL12A1-211ENST00000615798 NFKB2Q00653 900 aa8.89□□□□□ -0.99
COL12A1-211ENST00000615798 FNDC9Q8TBE3 224 aa8.89□□□□□ -0.99
COL12A1-211ENST00000615798 SEMA4CQ9C0C4 833 aa8.89□□□□□ -0.99
COL12A1-211ENST00000615798 RPF2Q9H7B2 306 aaKnown RBP8.89□□□□□ -0.99
COL12A1-211ENST00000615798 B4E171 279 aa8.88□□□□□ -0.99
COL12A1-211ENST00000615798 TAS2R40P59535 323 aa8.88□□□□□ -0.99
COL12A1-211ENST00000615798 CRB2Q5IJ48 1285 aa8.88□□□□□ -0.99
COL12A1-211ENST00000615798 FBXO16Q8IX29 292 aaPredicted RBP8.88□□□□□ -0.99
COL12A1-211ENST00000615798 GLYATL1Q969I3 302 aa8.88□□□□□ -0.99
COL12A1-211ENST00000615798 TAPBPLQ9BX59 468 aa8.88□□□□□ -0.99
COL12A1-211ENST00000615798 C11orf49Q9H6J7 331 aa8.88□□□□□ -0.99
COL12A1-211ENST00000615798 PIKFYVEQ9Y2I7 2098 aa8.88□□□□□ -0.99
COL12A1-211ENST00000615798 A0A1W2PPK0 400 aa8.88□□□□□ -0.99
COL12A1-211ENST00000615798 KLRG2A4D1S0 409 aaPredicted RBP8.88□□□□□ -0.99
COL12A1-211ENST00000615798 TFEBP19484 476 aa8.88□□□□□ -0.99
COL12A1-211ENST00000615798 EEFSECP57772 596 aaKnown RBP8.88□□□□□ -0.99
COL12A1-211ENST00000615798 PRR27Q6MZM9 219 aa8.88□□□□□ -0.99
COL12A1-211ENST00000615798 TIFABQ6ZNK6 161 aa8.88□□□□□ -0.99
COL12A1-211ENST00000615798 TBX5Q99593 518 aa8.88□□□□□ -0.99
COL12A1-211ENST00000615798 LIN28AQ9H9Z2 209 aaKnown RBP8.88□□□□□ -0.99
COL12A1-211ENST00000615798 PCDHB7Q9Y5E2 793 aa8.88□□□□□ -0.99
COL12A1-211ENST00000615798 CACNG2Q9Y698 323 aa8.88□□□□□ -0.99
COL12A1-211ENST00000615798 TSPAN11A1L157 253 aa8.88□□□□□ -0.99
COL12A1-211ENST00000615798 RPS5P46782 204 aaKnown RBP8.88□□□□□ -0.99
COL12A1-211ENST00000615798 PNLIPRP1P54315 467 aa8.88□□□□□ -0.99
COL12A1-211ENST00000615798 BEX3Q00994 111 aa8.88□□□□□ -0.99
COL12A1-211ENST00000615798 USP50Q70EL3 339 aaPredicted RBP8.88□□□□□ -0.99
COL12A1-211ENST00000615798 SLC38A6Q8IZM9 456 aa8.88□□□□□ -0.99
COL12A1-211ENST00000615798 MARC2Q969Z3 335 aa8.88□□□□□ -0.99
COL12A1-211ENST00000615798 TKTL2Q9H0I9 626 aa8.88□□□□□ -0.99
COL12A1-211ENST00000615798 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.88□□□□□ -0.99
COL12A1-211ENST00000615798 NUP98P52948 1817 aa8.88□□□□□ -0.99
COL12A1-211ENST00000615798 MTHFD2P13995 350 aa8.88□□□□□ -0.99
COL12A1-211ENST00000615798 PDZK1IP1Q13113 114 aa8.88□□□□□ -0.99
COL12A1-211ENST00000615798 CAMK2DQ13557 499 aa8.88□□□□□ -0.99
COL12A1-211ENST00000615798 TMPRSS11FQ6ZWK6 438 aa8.88□□□□□ -0.99
COL12A1-211ENST00000615798 OR4N2Q8NGD1 307 aa8.88□□□□□ -0.99
COL12A1-211ENST00000615798 ASB9Q96DX5 294 aa8.88□□□□□ -0.99
COL12A1-211ENST00000615798 PCDHB1Q9Y5F3 818 aa8.88□□□□□ -0.99
COL12A1-211ENST00000615798 GPR137BO60478 399 aa8.88□□□□□ -0.99
COL12A1-211ENST00000615798 HNRNPLP14866 589 aaKnown RBP eCLIP8.88□□□□□ -0.99
COL12A1-211ENST00000615798 RAB1AP62820 205 aa8.88□□□□□ -0.99
COL12A1-211ENST00000615798 ATG101Q9BSB4 218 aa8.88□□□□□ -0.99
COL12A1-211ENST00000615798 TM7SF3Q9NS93 570 aa8.88□□□□□ -0.99
COL12A1-211ENST00000615798 STYXL1Q9Y6J8 313 aa8.88□□□□□ -0.99
COL12A1-211ENST00000615798 BAZ2AQ9UIF9 1905 aaKnown RBP8.88□□□□□ -0.99
COL12A1-211ENST00000615798 RTCAO00442 366 aaKnown RBP8.88□□□□□ -0.99
COL12A1-211ENST00000615798 CLDN4O14493 209 aa8.88□□□□□ -0.99
COL12A1-211ENST00000615798 SLC2A1P11166 492 aa8.88□□□□□ -0.99
COL12A1-211ENST00000615798 PTBP1P26599 531 aaKnown RBP eCLIP8.88□□□□□ -0.99
COL12A1-211ENST00000615798 CRYBB1P53674 252 aaPredicted RBP8.88□□□□□ -0.99
COL12A1-211ENST00000615798 ZNF154Q13106 437 aa8.88□□□□□ -0.99
COL12A1-211ENST00000615798 SYT13Q7L8C5 426 aa8.88□□□□□ -0.99
COL12A1-211ENST00000615798 OR4C15Q8NGM1 316 aa8.88□□□□□ -0.99
COL12A1-211ENST00000615798 OR10K1Q8NGX5 313 aa8.88□□□□□ -0.99
COL12A1-211ENST00000615798 OR8U1Q8NH10 309 aa8.88□□□□□ -0.99
COL12A1-211ENST00000615798 RAB8BQ92930 207 aa8.88□□□□□ -0.99
COL12A1-211ENST00000615798 FCRL2Q96LA5 508 aaPredicted RBP8.88□□□□□ -0.99
COL12A1-211ENST00000615798 LRRC3Q9BY71 257 aa8.88□□□□□ -0.99
COL12A1-211ENST00000615798 ARVCFO00192 962 aa8.88□□□□□ -0.99
COL12A1-211ENST00000615798 TBX10O75333 385 aa8.88□□□□□ -0.99
COL12A1-211ENST00000615798 GAAP10253 952 aa8.88□□□□□ -0.99
COL12A1-211ENST00000615798 EIF4HQ15056 248 aaKnown RBP8.88□□□□□ -0.99
COL12A1-211ENST00000615798 DHCR24Q15392 516 aa8.88□□□□□ -0.99
COL12A1-211ENST00000615798 C11orf91Q3C1V1 193 aa8.88□□□□□ -0.99
COL12A1-211ENST00000615798 SCIMPQ6UWF3 145 aa8.88□□□□□ -0.99
COL12A1-211ENST00000615798 ABHD12BQ7Z5M8 362 aaPredicted RBP8.88□□□□□ -0.99
COL12A1-211ENST00000615798 ZFPM1Q8IX07 1006 aa8.88□□□□□ -0.99
COL12A1-211ENST00000615798 SYT3Q9BQG1 590 aa8.88□□□□□ -0.99
COL12A1-211ENST00000615798 ACKR4Q9NPB9 350 aa8.88□□□□□ -0.99
COL12A1-211ENST00000615798 TMEM98Q9Y2Y6 226 aa8.88□□□□□ -0.99
COL12A1-211ENST00000615798 H0YGN5 161 aa8.88□□□□□ -0.99
COL12A1-211ENST00000615798 PQBP1O60828 265 aaKnown RBP8.88□□□□□ -0.99
COL12A1-211ENST00000615798 EPOP01588 193 aa8.88□□□□□ -0.99
COL12A1-211ENST00000615798 OR1E1P30953 314 aa8.88□□□□□ -0.99
COL12A1-211ENST00000615798 TUBP50607 506 aa8.88□□□□□ -0.99
COL12A1-211ENST00000615798 OR2T5Q6IEZ7 315 aa8.88□□□□□ -0.99
COL12A1-211ENST00000615798 LGI4Q8N135 537 aa8.88□□□□□ -0.99
COL12A1-211ENST00000615798 OR2T29Q8NH02 315 aa8.88□□□□□ -0.99
COL12A1-211ENST00000615798 ANAPC16Q96DE5 110 aa8.88□□□□□ -0.99
COL12A1-211ENST00000615798 GPN2Q9H9Y4 310 aaPredicted RBP8.88□□□□□ -0.99
COL12A1-211ENST00000615798 SLC35D1Q9NTN3 355 aa8.88□□□□□ -0.99
COL12A1-211ENST00000615798 NFS1Q9Y697 457 aa8.88□□□□□ -0.99
COL12A1-211ENST00000615798 SCAMP2O15127 329 aaKnown RBP8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms