RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 ZNF675Q8TD23 568 aa7.5□□□□□ -1.21
PCDH9-205ENST00000614931 ELP4Q96EB1 424 aa7.5□□□□□ -1.21
PCDH9-205ENST00000614931 FAM120BQ96EK7 910 aaKnown RBP7.5□□□□□ -1.21
PCDH9-205ENST00000614931 GIMAP5Q96F15 307 aa7.5□□□□□ -1.21
PCDH9-205ENST00000614931 PTCHD1Q96NR3 888 aa7.5□□□□□ -1.21
PCDH9-205ENST00000614931 CDRT15Q96T59 188 aa7.5□□□□□ -1.21
PCDH9-205ENST00000614931 ARHGAP9Q9BRR9 750 aa7.5□□□□□ -1.21
PCDH9-205ENST00000614931 SLC35A5Q9BS91 424 aa7.5□□□□□ -1.21
PCDH9-205ENST00000614931 EFHD1Q9BUP0 239 aa7.5□□□□□ -1.21
PCDH9-205ENST00000614931 CXorf21Q9HAI6 301 aa7.5□□□□□ -1.21
PCDH9-205ENST00000614931 GIMAP4Q9NUV9 329 aa7.5□□□□□ -1.21
PCDH9-205ENST00000614931 C14orf105Q9NVL8 296 aa7.5□□□□□ -1.21
PCDH9-205ENST00000614931 GID8Q9NWU2 228 aa7.5□□□□□ -1.21
PCDH9-205ENST00000614931 TMEM181Q9P2C4 612 aa7.5□□□□□ -1.21
PCDH9-205ENST00000614931 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.5□□□□□ -1.21
PCDH9-205ENST00000614931 CD300AQ9UGN4 299 aa7.5□□□□□ -1.21
PCDH9-205ENST00000614931 IL17BQ9UHF5 180 aa7.5□□□□□ -1.21
PCDH9-205ENST00000614931 ZNF639Q9UID6 485 aa7.5□□□□□ -1.21
PCDH9-205ENST00000614931 MKL2Q9ULH7 1088 aa7.5□□□□□ -1.21
PCDH9-205ENST00000614931 VPS4AQ9UN37 437 aa7.5□□□□□ -1.21
PCDH9-205ENST00000614931 ZNF780BQ9Y6R6 833 aa7.5□□□□□ -1.21
PCDH9-205ENST00000614931 MED13Q9UHV7 2174 aa7.5□□□□□ -1.21
PCDH9-205ENST00000614931 KALRNO60229 2985 aa7.5□□□□□ -1.21
PCDH9-205ENST00000614931 IGHV3-20A0A0C4DH32 117 aa7.49□□□□□ -1.21
PCDH9-205ENST00000614931 PRORSD1PA6NEY8 169 aa7.49□□□□□ -1.21
PCDH9-205ENST00000614931 CLIC1O00299 241 aa7.49□□□□□ -1.21
PCDH9-205ENST00000614931 UPK1AO00322 258 aa7.49□□□□□ -1.21
PCDH9-205ENST00000614931 CLDN4O14493 209 aa7.49□□□□□ -1.21
PCDH9-205ENST00000614931 NKX2-8O15522 239 aa7.49□□□□□ -1.21
PCDH9-205ENST00000614931 ALOX12BO75342 701 aa7.49□□□□□ -1.21
PCDH9-205ENST00000614931 DNAJC8O75937 253 aaPredicted RBP7.49□□□□□ -1.21
PCDH9-205ENST00000614931 PSMG1O95456 288 aa7.49□□□□□ -1.21
PCDH9-205ENST00000614931 ANP32DO95626 131 aa7.49□□□□□ -1.21
PCDH9-205ENST00000614931 NPPAP01160 153 aa7.49□□□□□ -1.21
PCDH9-205ENST00000614931 ALBP02768 609 aa7.49□□□□□ -1.21
PCDH9-205ENST00000614931 KLK3P07288 261 aaPredicted RBP7.49□□□□□ -1.21
PCDH9-205ENST00000614931 NUDT7P0C024 238 aa7.49□□□□□ -1.21
PCDH9-205ENST00000614931 FAM87AP0C7U9 286 aa7.49□□□□□ -1.21
PCDH9-205ENST00000614931 AGXTP21549 392 aa7.49□□□□□ -1.21
PCDH9-205ENST00000614931 NT5EP21589 574 aa7.49□□□□□ -1.21
PCDH9-205ENST00000614931 IL10P22301 178 aa7.49□□□□□ -1.21
PCDH9-205ENST00000614931 UQCRC2P22695 453 aa7.49□□□□□ -1.21
PCDH9-205ENST00000614931 MPIP34949 423 aa7.49□□□□□ -1.21
PCDH9-205ENST00000614931 GPC1P35052 558 aa7.49□□□□□ -1.21
PCDH9-205ENST00000614931 MSX2P35548 267 aaPredicted RBP7.49□□□□□ -1.21
PCDH9-205ENST00000614931 GSK3BP49841 420 aa7.49□□□□□ -1.21
PCDH9-205ENST00000614931 OR4D2P58180 307 aa7.49□□□□□ -1.21
PCDH9-205ENST00000614931 RPS26P62854 115 aaKnown RBP7.49□□□□□ -1.21
PCDH9-205ENST00000614931 OCA2Q04671 838 aa7.49□□□□□ -1.21
PCDH9-205ENST00000614931 LRRC74AQ0VAA2 488 aa7.49□□□□□ -1.21
PCDH9-205ENST00000614931 STX4Q12846 297 aa7.49□□□□□ -1.21
PCDH9-205ENST00000614931 EXOSC7Q15024 291 aaKnown RBP7.49□□□□□ -1.21
PCDH9-205ENST00000614931 DNAL1Q4LDG9 190 aa7.49□□□□□ -1.21
PCDH9-205ENST00000614931 PIGGQ5H8A4 983 aa7.49□□□□□ -1.21
PCDH9-205ENST00000614931 EXOSC6Q5RKV6 272 aaKnown RBP7.49□□□□□ -1.21
PCDH9-205ENST00000614931 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.49□□□□□ -1.21
PCDH9-205ENST00000614931 PGM2L1Q6PCE3 622 aa7.49□□□□□ -1.21
PCDH9-205ENST00000614931 BORAQ6PGQ7 559 aa7.49□□□□□ -1.21
PCDH9-205ENST00000614931 TMEM64Q6YI46 380 aa7.49□□□□□ -1.21
PCDH9-205ENST00000614931 ANKRD37Q7Z713 158 aa7.49□□□□□ -1.21
PCDH9-205ENST00000614931 CALHM3Q86XJ0 350 aa7.49□□□□□ -1.21
PCDH9-205ENST00000614931 SAMD14Q8IZD0 417 aaPredicted RBP7.49□□□□□ -1.21
PCDH9-205ENST00000614931 ST13P4Q8IZP2 240 aaPredicted RBP7.49□□□□□ -1.21
PCDH9-205ENST00000614931 NATD1Q8N6N6 113 aa7.49□□□□□ -1.21
PCDH9-205ENST00000614931 HORMAD2Q8N7B1 307 aa7.49□□□□□ -1.21
PCDH9-205ENST00000614931 ZNF321PQ8N8H1 164 aa7.49□□□□□ -1.21
PCDH9-205ENST00000614931 VPS37AQ8NEZ2 397 aa7.49□□□□□ -1.21
PCDH9-205ENST00000614931 OR8J3Q8NGG0 315 aa7.49□□□□□ -1.21
PCDH9-205ENST00000614931 DNAJB8Q8NHS0 232 aa7.49□□□□□ -1.21
PCDH9-205ENST00000614931 SFXN5Q8TD22 340 aa7.49□□□□□ -1.21
PCDH9-205ENST00000614931 PTPMT1Q8WUK0 201 aaPredicted RBP7.49□□□□□ -1.21
PCDH9-205ENST00000614931 CTHRC1Q96CG8 243 aa7.49□□□□□ -1.21
PCDH9-205ENST00000614931 OTUB1Q96FW1 271 aaPredicted RBP7.49□□□□□ -1.21
PCDH9-205ENST00000614931 C16orf58Q96GQ5 468 aa7.49□□□□□ -1.21
PCDH9-205ENST00000614931 MAGED4Q96JG8 741 aa7.49□□□□□ -1.21
PCDH9-205ENST00000614931 ZNF583Q96ND8 569 aa7.49□□□□□ -1.21
PCDH9-205ENST00000614931 DGAT2Q96PD7 388 aa7.49□□□□□ -1.21
PCDH9-205ENST00000614931 WDR77Q9BQA1 342 aaPredicted RBP7.49□□□□□ -1.21
PCDH9-205ENST00000614931 DPH2Q9BQC3 489 aaPredicted RBP7.49□□□□□ -1.21
PCDH9-205ENST00000614931 THTPAQ9BU02 230 aa7.49□□□□□ -1.21
PCDH9-205ENST00000614931 PIF1Q9H611 641 aa7.49□□□□□ -1.21
PCDH9-205ENST00000614931 TPT1P8Q9HAU6 139 aa7.49□□□□□ -1.21
PCDH9-205ENST00000614931 NEUROD4Q9HD90 331 aa7.49□□□□□ -1.21
PCDH9-205ENST00000614931 PNO1Q9NRX1 252 aaKnown RBP7.49□□□□□ -1.21
PCDH9-205ENST00000614931 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.49□□□□□ -1.21
PCDH9-205ENST00000614931 NTMQ9P121 344 aa7.49□□□□□ -1.21
PCDH9-205ENST00000614931 GPN3Q9UHW5 284 aaPredicted RBP7.49□□□□□ -1.21
PCDH9-205ENST00000614931 C3orf18Q9UK00 162 aa7.49□□□□□ -1.21
PCDH9-205ENST00000614931 PSME2Q9UL46 239 aa7.49□□□□□ -1.21
PCDH9-205ENST00000614931 DTX4Q9Y2E6 619 aa7.49□□□□□ -1.21
PCDH9-205ENST00000614931 PTRH2Q9Y3E5 179 aaKnown RBP7.49□□□□□ -1.21
PCDH9-205ENST00000614931 SNX8Q9Y5X2 465 aa7.49□□□□□ -1.21
PCDH9-205ENST00000614931 MRPS18BQ9Y676 258 aaKnown RBP7.49□□□□□ -1.21
PCDH9-205ENST00000614931 GMEB1Q9Y692 573 aa7.49□□□□□ -1.21
PCDH9-205ENST00000614931 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.49□□□□□ -1.21
PCDH9-205ENST00000614931 EML6Q6ZMW3 1958 aa7.49□□□□□ -1.21
PCDH9-205ENST00000614931 ATRXP46100 2492 aa7.49□□□□□ -1.21
PCDH9-205ENST00000614931 C15orf38-AP3S2A0A0A6YYH1 394 aa7.48□□□□□ -1.21
PCDH9-205ENST00000614931 PRAMEF27A3QJZ7 478 aa7.48□□□□□ -1.21
PCDH9-205ENST00000614931 C9J4A7 227 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms