RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 C6orf136Q5SQH8 315 aa10.29□□□□□ -0.76
FAM3A-221ENST00000612856 DPPA4Q7L190 304 aa10.29□□□□□ -0.76
FAM3A-221ENST00000612856 LUZP2Q86TE4 346 aa10.29□□□□□ -0.76
FAM3A-221ENST00000612856 ZDHHC21Q8IVQ6 265 aa10.29□□□□□ -0.76
FAM3A-221ENST00000612856 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.29□□□□□ -0.76
FAM3A-221ENST00000612856 LSM14AQ8ND56 463 aaKnown RBP10.29□□□□□ -0.76
FAM3A-221ENST00000612856 ZNF480Q8WV37 535 aa10.29□□□□□ -0.76
FAM3A-221ENST00000612856 GTPBP3Q969Y2 492 aaKnown RBP10.29□□□□□ -0.76
FAM3A-221ENST00000612856 ZDHHC12Q96GR4 267 aa10.29□□□□□ -0.76
FAM3A-221ENST00000612856 FRMD6Q96NE9 622 aa10.29□□□□□ -0.76
FAM3A-221ENST00000612856 GPR78Q96P69 363 aa10.29□□□□□ -0.76
FAM3A-221ENST00000612856 SNX18Q96RF0 628 aa10.29□□□□□ -0.76
FAM3A-221ENST00000612856 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.29□□□□□ -0.76
FAM3A-221ENST00000612856 PPIL3Q9H2H8 161 aaKnown RBP10.29□□□□□ -0.76
FAM3A-221ENST00000612856 MMP17Q9ULZ9 603 aa10.29□□□□□ -0.76
FAM3A-221ENST00000612856 ELOVL7A1L3X0 281 aa10.29□□□□□ -0.76
FAM3A-221ENST00000612856 WASH4PA8MWX3 477 aa10.29□□□□□ -0.76
FAM3A-221ENST00000612856 B8ZZF3 427 aa10.29□□□□□ -0.76
FAM3A-221ENST00000612856 FAM227AF5H4B4 570 aa10.29□□□□□ -0.76
FAM3A-221ENST00000612856 SGK494L7N484 410 aa10.29□□□□□ -0.76
FAM3A-221ENST00000612856 HAT1O14929 419 aa10.29□□□□□ -0.76
FAM3A-221ENST00000612856 RDH16O75452 317 aa10.29□□□□□ -0.76
FAM3A-221ENST00000612856 PDE9AO76083 593 aa10.29□□□□□ -0.76
FAM3A-221ENST00000612856 SBK3P0C264 359 aa10.29□□□□□ -0.76
FAM3A-221ENST00000612856 XKP51811 444 aa10.29□□□□□ -0.76
FAM3A-221ENST00000612856 TAS2R41P59536 307 aa10.29□□□□□ -0.76
FAM3A-221ENST00000612856 DBPQ10586 325 aaPredicted RBP10.29□□□□□ -0.76
FAM3A-221ENST00000612856 GNA13Q14344 377 aa10.29□□□□□ -0.76
FAM3A-221ENST00000612856 KCNAB1Q14722 419 aa10.29□□□□□ -0.76
FAM3A-221ENST00000612856 SMAD2Q15796 467 aaKnown RBP10.29□□□□□ -0.76
FAM3A-221ENST00000612856 PLEKHS1Q5SXH7 462 aa10.29□□□□□ -0.76
FAM3A-221ENST00000612856 GALNT11Q8NCW6 608 aa10.29□□□□□ -0.76
FAM3A-221ENST00000612856 GPR150Q8NGU9 434 aa10.29□□□□□ -0.76
FAM3A-221ENST00000612856 FNDC11Q9BVV2 318 aa10.29□□□□□ -0.76
FAM3A-221ENST00000612856 SEMA3GQ9NS98 782 aa10.29□□□□□ -0.76
FAM3A-221ENST00000612856 MRPS7Q9Y2R9 242 aaKnown RBP10.29□□□□□ -0.76
FAM3A-221ENST00000612856 NINQ8N4C6 2090 aa10.29□□□□□ -0.76
FAM3A-221ENST00000612856 IGLV3-10A0A075B6K4 115 aa10.29□□□□□ -0.76
FAM3A-221ENST00000612856 A0A1W2PRG6 482 aa10.29□□□□□ -0.76
FAM3A-221ENST00000612856 FABP12A6NFH5 140 aa10.29□□□□□ -0.76
FAM3A-221ENST00000612856 SYPP08247 313 aa10.29□□□□□ -0.76
FAM3A-221ENST00000612856 OR1E2P47887 323 aa10.29□□□□□ -0.76
FAM3A-221ENST00000612856 ZNF45Q02386 682 aa10.29□□□□□ -0.76
FAM3A-221ENST00000612856 POU4F3Q15319 338 aa10.29□□□□□ -0.76
FAM3A-221ENST00000612856 GTF2IRD2BQ6EKJ0 949 aa10.29□□□□□ -0.76
FAM3A-221ENST00000612856 CDC73Q6P1J9 531 aa10.29□□□□□ -0.76
FAM3A-221ENST00000612856 FIGNL1Q6PIW4 674 aa10.29□□□□□ -0.76
FAM3A-221ENST00000612856 SLC16A12Q6ZSM3 486 aa10.29□□□□□ -0.76
FAM3A-221ENST00000612856 GTF2IRD2Q86UP8 949 aa10.29□□□□□ -0.76
FAM3A-221ENST00000612856 UBQLNLQ8IYU4 475 aa10.29□□□□□ -0.76
FAM3A-221ENST00000612856 PRR22Q8IZ63 422 aa10.29□□□□□ -0.76
FAM3A-221ENST00000612856 MFSD4AQ8N468 514 aa10.29□□□□□ -0.76
FAM3A-221ENST00000612856 AADATQ8N5Z0 425 aa10.29□□□□□ -0.76
FAM3A-221ENST00000612856 CMTM7Q96FZ5 175 aa10.29□□□□□ -0.76
FAM3A-221ENST00000612856 NARS2Q96I59 477 aaKnown RBP10.29□□□□□ -0.76
FAM3A-221ENST00000612856 DPH2Q9BQC3 489 aaPredicted RBP10.29□□□□□ -0.76
FAM3A-221ENST00000612856 C1QTNF1Q9BXJ1 281 aa10.29□□□□□ -0.76
FAM3A-221ENST00000612856 PCBD2Q9H0N5 130 aa10.29□□□□□ -0.76
FAM3A-221ENST00000612856 RDH8Q9NYR8 311 aa10.29□□□□□ -0.76
FAM3A-221ENST00000612856 CXCR6O00574 342 aa10.28□□□□□ -0.76
FAM3A-221ENST00000612856 DFNA5O60443 496 aa10.28□□□□□ -0.76
FAM3A-221ENST00000612856 BCHEP06276 602 aa10.28□□□□□ -0.76
FAM3A-221ENST00000612856 HSD17B1P14061 328 aa10.28□□□□□ -0.76
FAM3A-221ENST00000612856 IL12BP29460 328 aa10.28□□□□□ -0.76
FAM3A-221ENST00000612856 MPIP34949 423 aa10.28□□□□□ -0.76
FAM3A-221ENST00000612856 AFF3P51826 1226 aaKnown RBP10.28□□□□□ -0.76
FAM3A-221ENST00000612856 HK3P52790 923 aa10.28□□□□□ -0.76
FAM3A-221ENST00000612856 ERVK-8P63133 956 aa10.28□□□□□ -0.76
FAM3A-221ENST00000612856 UGT8Q16880 541 aa10.28□□□□□ -0.76
FAM3A-221ENST00000612856 RFTN2Q52LD8 501 aaPredicted RBP10.28□□□□□ -0.76
FAM3A-221ENST00000612856 OR5M10Q6IEU7 315 aa10.28□□□□□ -0.76
FAM3A-221ENST00000612856 WDR36Q8NI36 951 aaKnown RBP10.28□□□□□ -0.76
FAM3A-221ENST00000612856 TMEM125Q96AQ2 219 aa10.28□□□□□ -0.76
FAM3A-221ENST00000612856 ZBED6CLQ96FA7 236 aaPredicted RBP10.28□□□□□ -0.76
FAM3A-221ENST00000612856 DGAT2Q96PD7 388 aa10.28□□□□□ -0.76
FAM3A-221ENST00000612856 SLC35A5Q9BS91 424 aa10.28□□□□□ -0.76
FAM3A-221ENST00000612856 AMBRA1Q9C0C7 1298 aa10.28□□□□□ -0.76
FAM3A-221ENST00000612856 CCNB1IP1Q9NPC3 277 aa10.28□□□□□ -0.76
FAM3A-221ENST00000612856 BRD7Q9NPI1 651 aa10.28□□□□□ -0.76
FAM3A-221ENST00000612856 M0R129 80 aa10.28□□□□□ -0.76
FAM3A-221ENST00000612856 TLR4O00206 839 aa10.28□□□□□ -0.76
FAM3A-221ENST00000612856 CLIC1O00299 241 aa10.28□□□□□ -0.76
FAM3A-221ENST00000612856 GABRG2P18507 467 aa10.28□□□□□ -0.76
FAM3A-221ENST00000612856 DDCP20711 480 aa10.28□□□□□ -0.76
FAM3A-221ENST00000612856 GPX3P22352 226 aa10.28□□□□□ -0.76
FAM3A-221ENST00000612856 PTX3P26022 381 aaPredicted RBP10.28□□□□□ -0.76
FAM3A-221ENST00000612856 EVI2BP34910 448 aa10.28□□□□□ -0.76
FAM3A-221ENST00000612856 ASMTP46597 345 aa10.28□□□□□ -0.76
FAM3A-221ENST00000612856 BTN1A1Q13410 526 aa10.28□□□□□ -0.76
FAM3A-221ENST00000612856 C3orf38Q5JPI3 329 aa10.28□□□□□ -0.76
FAM3A-221ENST00000612856 TCEAL6Q6IPX3 200 aa10.28□□□□□ -0.76
FAM3A-221ENST00000612856 KLHDC8AQ8IYD2 350 aa10.28□□□□□ -0.76
FAM3A-221ENST00000612856 MINDY1Q8N5J2 469 aa10.28□□□□□ -0.76
FAM3A-221ENST00000612856 TCEAL3Q969E4 200 aa10.28□□□□□ -0.76
FAM3A-221ENST00000612856 SLC38A4Q969I6 547 aa10.28□□□□□ -0.76
FAM3A-221ENST00000612856 ISG20Q96AZ6 181 aaKnown RBP10.28□□□□□ -0.76
FAM3A-221ENST00000612856 DHRS9Q9BPW9 319 aa10.28□□□□□ -0.76
FAM3A-221ENST00000612856 SAV1Q9H4B6 383 aaPredicted RBP10.28□□□□□ -0.76
FAM3A-221ENST00000612856 MEAF6Q9HAF1 191 aa10.28□□□□□ -0.76
FAM3A-221ENST00000612856 SLC35C2Q9NQQ7 365 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms